RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 ROCK1Q13464 1354 aa38.53■■■■□ 3.76
TPM2-203ENST00000378292 KDM6BO15054 1643 aa38.53■■■■□ 3.76
TPM2-203ENST00000378292 CAMSAP2Q08AD1 1489 aa38.5■■■■□ 3.75
TPM2-203ENST00000378292 MIER1Q8N108 512 aa38.5■■■■□ 3.75
TPM2-203ENST00000378292 TRIM52Q96A61 297 aa38.44■■■■□ 3.74
TPM2-203ENST00000378292 PPP1R15AO75807 674 aaPredicted RBP38.41■■■■□ 3.74
TPM2-203ENST00000378292 ABCC10Q5T3U5 1492 aa38.41■■■■□ 3.74
TPM2-203ENST00000378292 TONSLQ96HA7 1378 aa38.39■■■■□ 3.74
TPM2-203ENST00000378292 ZNF777Q9ULD5 760 aaPredicted RBP38.39■■■■□ 3.74
TPM2-203ENST00000378292 DENND4BO75064 1496 aaPredicted RBP38.37■■■■□ 3.73
TPM2-203ENST00000378292 CDC42BPAQ5VT25 1732 aa38.37■■■■□ 3.73
TPM2-203ENST00000378292 ERCC6L2Q5T890 1561 aa38.33■■■■□ 3.73
TPM2-203ENST00000378292 ACIN1Q9UKV3 1341 aaKnown RBP38.33■■■■□ 3.73
TPM2-203ENST00000378292 MPHOSPH9Q99550 1183 aa38.3■■■■□ 3.72
TPM2-203ENST00000378292 CROCC2H7BZ55 1655 aa38.28■■■■□ 3.72
TPM2-203ENST00000378292 ADGBQ8N7X0 1667 aa38.28■■■■□ 3.72
TPM2-203ENST00000378292 CLASP1Q7Z460 1538 aa38.27■■■■□ 3.72
TPM2-203ENST00000378292 NCOA1Q15788 1441 aa38.26■■■■□ 3.72
TPM2-203ENST00000378292 ADGRL2O95490 1459 aa38.23■■■■□ 3.71
TPM2-203ENST00000378292 CENPBP07199 599 aaPredicted RBP38.23■■■■□ 3.71
TPM2-203ENST00000378292 ABCC2Q92887 1545 aa38.2■■■■□ 3.71
TPM2-203ENST00000378292 ANKRD30AQ9BXX3 1397 aa38.15■■■■□ 3.7
TPM2-203ENST00000378292 KDM5BQ9UGL1 1544 aa38.14■■■■□ 3.7
TPM2-203ENST00000378292 SHANK2Q9UPX8 1470 aa38.12■■■■□ 3.69
TPM2-203ENST00000378292 FOXD1Q16676 465 aa38.11■■■■□ 3.69
TPM2-203ENST00000378292 PREX2Q70Z35 1606 aa38.09■■■■□ 3.69
TPM2-203ENST00000378292 YTHDC1Q96MU7 727 aaKnown RBP38.08■■■■□ 3.69
TPM2-203ENST00000378292 SLC4A1APQ9BWU0 796 aaKnown RBP38.07■■■■□ 3.68
TPM2-203ENST00000378292 CDC42BPBQ9Y5S2 1711 aa38.07■■■■□ 3.68
TPM2-203ENST00000378292 C9orf84Q5VXU9 1444 aa38.07■■■■□ 3.68
TPM2-203ENST00000378292 SCAF1Q9H7N4 1312 aaKnown RBP38.05■■■■□ 3.68
TPM2-203ENST00000378292 ANKRD30BQ9BXX2 1392 aa38.05■■■■□ 3.68
TPM2-203ENST00000378292 ARHGEF5Q12774 1597 aa38.04■■■■□ 3.68
TPM2-203ENST00000378292 SAMD9LQ8IVG5 1584 aa38.02■■■■□ 3.68
TPM2-203ENST00000378292 PZPP20742 1482 aa38.02■■■■□ 3.68
TPM2-203ENST00000378292 HNRNPMP52272 730 aaKnown RBP eCLIP38.02■■■■□ 3.68
TPM2-203ENST00000378292 TSPY4P0CV99 314 aa38.01■■■■□ 3.68
TPM2-203ENST00000378292 TSPY10P0CW01 314 aa38.01■■■■□ 3.68
TPM2-203ENST00000378292 ANKRD50Q9ULJ7 1429 aa38.01■■■■□ 3.68
TPM2-203ENST00000378292 TTC37Q6PGP7 1564 aa38.01■■■■□ 3.67
TPM2-203ENST00000378292 MBD5Q9P267 1494 aa38.01■■■■□ 3.67
TPM2-203ENST00000378292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.99■■■■□ 3.672e-7■■■□□ 15.8
TPM2-203ENST00000378292 UHRF1BP1LA0JNW5 1464 aa37.99■■■■□ 3.67
TPM2-203ENST00000378292 HIRIP3Q9BW71 556 aaPredicted RBP37.97■■■■□ 3.67
TPM2-203ENST00000378292 RPRD2Q5VT52 1461 aaKnown RBP37.95■■■■□ 3.67
TPM2-203ENST00000378292 ZCCHC11Q5TAX3 1644 aaKnown RBP37.93■■■■□ 3.66
TPM2-203ENST00000378292 CCDC141Q6ZP82 1450 aa37.92■■■■□ 3.66
TPM2-203ENST00000378292 ARHGAP5Q13017 1502 aa37.91■■■■□ 3.66
TPM2-203ENST00000378292 L3MBTL2Q969R5 705 aa37.9■■■■□ 3.66
TPM2-203ENST00000378292 DDX10Q13206 875 aaKnown RBP37.89■■■■□ 3.66
TPM2-203ENST00000378292 RSPH4AQ5TD94 716 aa37.88■■■■□ 3.66
TPM2-203ENST00000378292 MYO5CQ9NQX4 1742 aa37.87■■■■□ 3.65
TPM2-203ENST00000378292 KIF15Q9NS87 1388 aa37.87■■■■□ 3.65
TPM2-203ENST00000378292 KCNH8Q96L42 1107 aa37.87■■■■□ 3.65
TPM2-203ENST00000378292 SYCP2Q9BX26 1530 aa37.84■■■■□ 3.65
TPM2-203ENST00000378292 KIAA1107Q9UPP5 1409 aa37.84■■■■□ 3.65
TPM2-203ENST00000378292 TEX14Q8IWB6 1497 aa37.81■■■■□ 3.64
TPM2-203ENST00000378292 PKD2Q13563 968 aa37.79■■■■□ 3.64
TPM2-203ENST00000378292 NUP155O75694 1391 aa37.78■■■■□ 3.64
TPM2-203ENST00000378292 PLEKHH2Q8IVE3 1493 aa37.76■■■■□ 3.63
TPM2-203ENST00000378292 KDM5DQ9BY66 1539 aa37.75■■■■□ 3.63
TPM2-203ENST00000378292 MAST1Q9Y2H9 1570 aa37.73■■■■□ 3.63
TPM2-203ENST00000378292 PLCH2O75038 1416 aa37.73■■■■□ 3.63
TPM2-203ENST00000378292 HSPA5P11021 654 aaKnown RBP37.66■■■■□ 3.62
TPM2-203ENST00000378292 GTF3C3Q9Y5Q9 886 aa37.64■■■■□ 3.62
TPM2-203ENST00000378292 NBPF8Q3BBV2 869 aa37.64■■■■□ 3.62
TPM2-203ENST00000378292 ARHGEF12Q9NZN5 1544 aa37.64■■■■□ 3.62
TPM2-203ENST00000378292 EIF4G2P78344 907 aaKnown RBP eCLIP37.63■■■■□ 3.61
TPM2-203ENST00000378292 EFCAB2Q5VUJ9 269 aa37.63■■■■□ 3.61
TPM2-203ENST00000378292 PLXNC1O60486 1568 aa37.59■■■■□ 3.61
TPM2-203ENST00000378292 WDR7Q9Y4E6 1490 aa37.56■■■■□ 3.6
TPM2-203ENST00000378292 ABCC1P33527 1531 aa37.55■■■■□ 3.6
TPM2-203ENST00000378292 FAM135AQ9P2D6 1515 aa37.54■■■■□ 3.6
TPM2-203ENST00000378292 OSCARQ8IYS5 282 aa37.53■■■■□ 3.6
TPM2-203ENST00000378292 ARAP3Q8WWN8 1544 aa37.51■■■■□ 3.6
TPM2-203ENST00000378292 UNC13BO14795 1591 aa37.49■■■■□ 3.59
TPM2-203ENST00000378292 ANP32CO43423 234 aa37.48■■■■□ 3.59
TPM2-203ENST00000378292 WASHC2AQ641Q2 1341 aa37.48■■■■□ 3.59
TPM2-203ENST00000378292 DUOX2Q9NRD8 1548 aa37.47■■■■□ 3.59
TPM2-203ENST00000378292 TRAPPC8Q9Y2L5 1435 aa37.46■■■■□ 3.59
TPM2-203ENST00000378292 ERBINQ96RT1 1412 aa37.4■■■■□ 3.58
TPM2-203ENST00000378292 SPATA31E1Q6ZUB1 1445 aa37.39■■■■□ 3.58
TPM2-203ENST00000378292 ABCA9Q8IUA7 1624 aa37.38■■■■□ 3.58
TPM2-203ENST00000378292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.37■■■■□ 3.575e-7■■■■□ 20.4
TPM2-203ENST00000378292 CCER2I3L3R5 266 aa37.37■■■■□ 3.57
TPM2-203ENST00000378292 ASXL2Q76L83 1435 aa37.36■■■■□ 3.57
TPM2-203ENST00000378292 IQGAP3Q86VI3 1631 aa37.35■■■■□ 3.57
TPM2-203ENST00000378292 ZNF326Q5BKZ1 582 aaKnown RBP37.34■■■■□ 3.57
TPM2-203ENST00000378292 FANCAO15360 1455 aa37.33■■■■□ 3.57
TPM2-203ENST00000378292 UHRF1BP1Q6BDS2 1440 aa37.33■■■■□ 3.57
TPM2-203ENST00000378292 SPAG9O60271 1321 aaKnown RBP37.32■■■■□ 3.56
TPM2-203ENST00000378292 C11orf95C9JLR9 678 aaPredicted RBP37.31■■■■□ 3.56
TPM2-203ENST00000378292 MAGI2Q86UL8 1455 aa37.31■■■■□ 3.56
TPM2-203ENST00000378292 AFAP1Q8N556 730 aa37.31■■■■□ 3.56
TPM2-203ENST00000378292 RTEL1-TNFRSF6BF6WH68 1400 aa37.3■■■■□ 3.56
TPM2-203ENST00000378292 CCDC7Q96M83 1385 aa37.3■■■■□ 3.56
TPM2-203ENST00000378292 ZFYVE16Q7Z3T8 1539 aa37.27■■■■□ 3.56
TPM2-203ENST00000378292 CCDC144AA2RUR9 1427 aa37.26■■■■□ 3.55
TPM2-203ENST00000378292 PLA2R1Q13018 1463 aa37.23■■■■□ 3.55
TPM2-203ENST00000378292 NPM1P06748 294 aaKnown RBP eCLIP37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms