RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 NAIPQ13075 1403 aa22.27■■□□□ 1.16
ARHGEF1-204ENST00000378152 CDK13Q14004 1512 aaKnown RBP22.25■■□□□ 1.15
ARHGEF1-204ENST00000378152 NCOA2Q15596 1464 aa22.25■■□□□ 1.15
ARHGEF1-204ENST00000378152 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
ARHGEF1-204ENST00000378152 PRKCSHP14314 528 aaPredicted RBP22.25■■□□□ 1.15
ARHGEF1-204ENST00000378152 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
ARHGEF1-204ENST00000378152 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
ARHGEF1-204ENST00000378152 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
ARHGEF1-204ENST00000378152 WASHC2AQ641Q2 1341 aa22.21■■□□□ 1.15
ARHGEF1-204ENST00000378152 MSH5O43196 834 aa22.2■■□□□ 1.14
ARHGEF1-204ENST00000378152 KDM5BQ9UGL1 1544 aa22.2■■□□□ 1.14
ARHGEF1-204ENST00000378152 ADCY10Q96PN6 1610 aa22.19■■□□□ 1.14
ARHGEF1-204ENST00000378152 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
ARHGEF1-204ENST00000378152 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
ARHGEF1-204ENST00000378152 TCOF1Q13428 1488 aaKnown RBP22.16■■□□□ 1.14
ARHGEF1-204ENST00000378152 CCDC184Q52MB2 194 aa22.16■■□□□ 1.14
ARHGEF1-204ENST00000378152 CDK11AQ9UQ88 783 aaPredicted RBP22.15■■□□□ 1.14
ARHGEF1-204ENST00000378152 EIF4G2P78344 907 aaKnown RBP eCLIP22.11■■□□□ 1.134e-7■■■■□ 20.1
ARHGEF1-204ENST00000378152 FOXD1Q16676 465 aa22.11■■□□□ 1.13
ARHGEF1-204ENST00000378152 MIA2Q96PC5 1412 aa22.1■■□□□ 1.13
ARHGEF1-204ENST00000378152 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
ARHGEF1-204ENST00000378152 TROQ12816 1431 aaPredicted RBP22.08■■□□□ 1.13
ARHGEF1-204ENST00000378152 DENND4BO75064 1496 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF1-204ENST00000378152 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
ARHGEF1-204ENST00000378152 C11orf95C9JLR9 678 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF1-204ENST00000378152 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
ARHGEF1-204ENST00000378152 PTPRGP23470 1445 aa22.06■■□□□ 1.12
ARHGEF1-204ENST00000378152 ERCC6L2Q5T890 1561 aa22.05■■□□□ 1.12
ARHGEF1-204ENST00000378152 KDM6BO15054 1643 aa22.05■■□□□ 1.12
ARHGEF1-204ENST00000378152 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
ARHGEF1-204ENST00000378152 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
ARHGEF1-204ENST00000378152 CNTLNQ9NXG0 1405 aa22.04■■□□□ 1.12
ARHGEF1-204ENST00000378152 ATP10BO94823 1461 aa22.04■■□□□ 1.12
ARHGEF1-204ENST00000378152 ERICH6Q7L0X2 663 aa22.02■■□□□ 1.12
ARHGEF1-204ENST00000378152 FANCIQ9NVI1 1328 aa22.02■■□□□ 1.12
ARHGEF1-204ENST00000378152 MRS2Q9HD23 443 aa22.02■■□□□ 1.11
ARHGEF1-204ENST00000378152 PRKRIP1Q9H875 184 aaPredicted RBP22■■□□□ 1.11
ARHGEF1-204ENST00000378152 PPP4R2Q9NY27 417 aa22■■□□□ 1.11
ARHGEF1-204ENST00000378152 ABCC2Q92887 1545 aa22■■□□□ 1.11
ARHGEF1-204ENST00000378152 KIF14Q15058 1648 aa21.99■■□□□ 1.11
ARHGEF1-204ENST00000378152 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
ARHGEF1-204ENST00000378152 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
ARHGEF1-204ENST00000378152 CCDC7Q96M83 1385 aa21.97■■□□□ 1.11
ARHGEF1-204ENST00000378152 GCC2Q8IWJ2 1684 aa21.97■■□□□ 1.11
ARHGEF1-204ENST00000378152 CNGB1Q14028 1251 aaPredicted RBP21.96■■□□□ 1.11
ARHGEF1-204ENST00000378152 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
ARHGEF1-204ENST00000378152 NBPF8Q3BBV2 869 aa21.95■■□□□ 1.1
ARHGEF1-204ENST00000378152 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.1
ARHGEF1-204ENST00000378152 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
ARHGEF1-204ENST00000378152 DNMT1P26358 1616 aaKnown RBP21.93■■□□□ 1.1
ARHGEF1-204ENST00000378152 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
ARHGEF1-204ENST00000378152 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
ARHGEF1-204ENST00000378152 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
ARHGEF1-204ENST00000378152 ZBED9Q6R2W3 1325 aa21.89■■□□□ 1.09
ARHGEF1-204ENST00000378152 KIF7Q2M1P5 1343 aa21.88■■□□□ 1.09
ARHGEF1-204ENST00000378152 CROCC2H7BZ55 1655 aa21.86■■□□□ 1.09
ARHGEF1-204ENST00000378152 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
ARHGEF1-204ENST00000378152 POLR3GLQ9BT43 218 aa21.85■■□□□ 1.09
ARHGEF1-204ENST00000378152 ANKRD30BQ9BXX2 1392 aa21.84■■□□□ 1.09
ARHGEF1-204ENST00000378152 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
ARHGEF1-204ENST00000378152 CAMSAP2Q08AD1 1489 aa21.83■■□□□ 1.09
ARHGEF1-204ENST00000378152 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
ARHGEF1-204ENST00000378152 PREX2Q70Z35 1606 aa21.83■■□□□ 1.08
ARHGEF1-204ENST00000378152 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
ARHGEF1-204ENST00000378152 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF1-204ENST00000378152 DAPK1P53355 1430 aa21.82■■□□□ 1.08
ARHGEF1-204ENST00000378152 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
ARHGEF1-204ENST00000378152 RPRD2Q5VT52 1461 aaKnown RBP21.81■■□□□ 1.08
ARHGEF1-204ENST00000378152 ADGBQ8N7X0 1667 aa21.81■■□□□ 1.08
ARHGEF1-204ENST00000378152 ABCC5O15440 1437 aa21.79■■□□□ 1.08
ARHGEF1-204ENST00000378152 TEX14Q8IWB6 1497 aa21.79■■□□□ 1.08
ARHGEF1-204ENST00000378152 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
ARHGEF1-204ENST00000378152 CDC42BPBQ9Y5S2 1711 aa21.77■■□□□ 1.08
ARHGEF1-204ENST00000378152 SPATA31E1Q6ZUB1 1445 aa21.77■■□□□ 1.07
ARHGEF1-204ENST00000378152 ADGRL2O95490 1459 aa21.75■■□□□ 1.07
ARHGEF1-204ENST00000378152 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
ARHGEF1-204ENST00000378152 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
ARHGEF1-204ENST00000378152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.07
ARHGEF1-204ENST00000378152 SHANK2Q9UPX8 1470 aa21.74■■□□□ 1.07
ARHGEF1-204ENST00000378152 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
ARHGEF1-204ENST00000378152 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
ARHGEF1-204ENST00000378152 CFDP1Q9UEE9 299 aaPredicted RBP21.7■■□□□ 1.06
ARHGEF1-204ENST00000378152 SAMD9LQ8IVG5 1584 aa21.69■■□□□ 1.06
ARHGEF1-204ENST00000378152 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
ARHGEF1-204ENST00000378152 POLR1AO95602 1720 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF1-204ENST00000378152 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
ARHGEF1-204ENST00000378152 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
ARHGEF1-204ENST00000378152 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
ARHGEF1-204ENST00000378152 ARAP3Q8WWN8 1544 aa21.66■■□□□ 1.06
ARHGEF1-204ENST00000378152 NOP58Q9Y2X3 529 aaKnown RBP21.65■■□□□ 1.06
ARHGEF1-204ENST00000378152 PAK3O75914 559 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF1-204ENST00000378152 NBR1Q14596 966 aa21.65■■□□□ 1.06
ARHGEF1-204ENST00000378152 USP47Q96K76 1375 aa21.65■■□□□ 1.06
ARHGEF1-204ENST00000378152 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
ARHGEF1-204ENST00000378152 MBD5Q9P267 1494 aa21.63■■□□□ 1.05
ARHGEF1-204ENST00000378152 MAST1Q9Y2H9 1570 aa21.62■■□□□ 1.05
ARHGEF1-204ENST00000378152 DEKP35659 375 aaKnown RBP21.62■■□□□ 1.05
ARHGEF1-204ENST00000378152 PZPP20742 1482 aa21.62■■□□□ 1.05
ARHGEF1-204ENST00000378152 BCORL1Q5H9F3 1711 aa21.62■■□□□ 1.05
ARHGEF1-204ENST00000378152 PLEKHH2Q8IVE3 1493 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms