RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 DAPK1P53355 1430 aa19.22■□□□□ 0.67
SF1-205ENST00000377394 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
SF1-205ENST00000377394 KIAA0586Q9BVV6 1533 aa19.22■□□□□ 0.67
SF1-205ENST00000377394 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
SF1-205ENST00000377394 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
SF1-205ENST00000377394 ABCC5O15440 1437 aa19.2■□□□□ 0.66
SF1-205ENST00000377394 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
SF1-205ENST00000377394 EIF4G2P78344 907 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■■□□□ 12.5
SF1-205ENST00000377394 FOXD1Q16676 465 aa19.2■□□□□ 0.66
SF1-205ENST00000377394 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
SF1-205ENST00000377394 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
SF1-205ENST00000377394 DEKP35659 375 aaKnown RBP19.18■□□□□ 0.66
SF1-205ENST00000377394 ZNF644Q9H582 1327 aaPredicted RBP19.17■□□□□ 0.66
SF1-205ENST00000377394 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
SF1-205ENST00000377394 RAPGEF6Q8TEU7 1601 aa19.16■□□□□ 0.66
SF1-205ENST00000377394 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
SF1-205ENST00000377394 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
SF1-205ENST00000377394 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
SF1-205ENST00000377394 TEX14Q8IWB6 1497 aa19.14■□□□□ 0.65
SF1-205ENST00000377394 NCOA1Q15788 1441 aa19.13■□□□□ 0.65
SF1-205ENST00000377394 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
SF1-205ENST00000377394 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
SF1-205ENST00000377394 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
SF1-205ENST00000377394 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
SF1-205ENST00000377394 CCDC7Q96M83 1385 aa19.11■□□□□ 0.65
SF1-205ENST00000377394 CDK11AQ9UQ88 783 aaPredicted RBP19.1■□□□□ 0.65
SF1-205ENST00000377394 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
SF1-205ENST00000377394 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.64
SF1-205ENST00000377394 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
SF1-205ENST00000377394 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
SF1-205ENST00000377394 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
SF1-205ENST00000377394 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
SF1-205ENST00000377394 PZPP20742 1482 aa19.06■□□□□ 0.64
SF1-205ENST00000377394 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
SF1-205ENST00000377394 PRKRIP1Q9H875 184 aaPredicted RBP19.04■□□□□ 0.64
SF1-205ENST00000377394 GPATCH8Q9UKJ3 1502 aaKnown RBP19.03■□□□□ 0.64
SF1-205ENST00000377394 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
SF1-205ENST00000377394 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
SF1-205ENST00000377394 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.63
SF1-205ENST00000377394 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
SF1-205ENST00000377394 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
SF1-205ENST00000377394 ADCY10Q96PN6 1610 aa19.01■□□□□ 0.63
SF1-205ENST00000377394 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
SF1-205ENST00000377394 ADGRL2O95490 1459 aa19■□□□□ 0.63
SF1-205ENST00000377394 ADGBQ8N7X0 1667 aa19■□□□□ 0.63
SF1-205ENST00000377394 KIF14Q15058 1648 aa19■□□□□ 0.63
SF1-205ENST00000377394 NBR1Q14596 966 aa18.99■□□□□ 0.63
SF1-205ENST00000377394 POLR1AO95602 1720 aaPredicted RBP18.99■□□□□ 0.63
SF1-205ENST00000377394 MBD5Q9P267 1494 aa18.98■□□□□ 0.63
SF1-205ENST00000377394 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
SF1-205ENST00000377394 SYNJ2O15056 1496 aa18.98■□□□□ 0.63
SF1-205ENST00000377394 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
SF1-205ENST00000377394 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
SF1-205ENST00000377394 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
SF1-205ENST00000377394 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
SF1-205ENST00000377394 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
SF1-205ENST00000377394 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
SF1-205ENST00000377394 NUP160Q12769 1436 aa18.92■□□□□ 0.62
SF1-205ENST00000377394 FAM9BQ8IZU0 186 aa18.92■□□□□ 0.62
SF1-205ENST00000377394 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
SF1-205ENST00000377394 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
SF1-205ENST00000377394 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
SF1-205ENST00000377394 PAK3O75914 559 aaPredicted RBP18.91■□□□□ 0.62
SF1-205ENST00000377394 PKD2Q13563 968 aa18.91■□□□□ 0.62
SF1-205ENST00000377394 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
SF1-205ENST00000377394 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.61
SF1-205ENST00000377394 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
SF1-205ENST00000377394 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
SF1-205ENST00000377394 ABCC10Q5T3U5 1492 aa18.88■□□□□ 0.61
SF1-205ENST00000377394 DHX29Q7Z478 1369 aaKnown RBP18.88■□□□□ 0.61
SF1-205ENST00000377394 FBLN2P98095 1184 aa18.87■□□□□ 0.61
SF1-205ENST00000377394 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
SF1-205ENST00000377394 USP47Q96K76 1375 aa18.87■□□□□ 0.61
SF1-205ENST00000377394 ABCA8O94911 1581 aa18.87■□□□□ 0.61
SF1-205ENST00000377394 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
SF1-205ENST00000377394 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
SF1-205ENST00000377394 SHANK2Q9UPX8 1470 aa18.86■□□□□ 0.61
SF1-205ENST00000377394 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
SF1-205ENST00000377394 ATP10BO94823 1461 aa18.85■□□□□ 0.61
SF1-205ENST00000377394 KDM5CP41229 1560 aa18.84■□□□□ 0.61
SF1-205ENST00000377394 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
SF1-205ENST00000377394 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
SF1-205ENST00000377394 PLEKHD1A6NEE1 506 aa18.83■□□□□ 0.61
SF1-205ENST00000377394 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
SF1-205ENST00000377394 PPP4R2Q9NY27 417 aa18.82■□□□□ 0.6
SF1-205ENST00000377394 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
SF1-205ENST00000377394 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
SF1-205ENST00000377394 NUP155O75694 1391 aa18.81■□□□□ 0.6
SF1-205ENST00000377394 KDM5DQ9BY66 1539 aa18.81■□□□□ 0.6
SF1-205ENST00000377394 RALGAPBQ86X10 1494 aa18.8■□□□□ 0.6
SF1-205ENST00000377394 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
SF1-205ENST00000377394 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
SF1-205ENST00000377394 ARHGEF12Q9NZN5 1544 aa18.78■□□□□ 0.6
SF1-205ENST00000377394 PTPRGP23470 1445 aa18.77■□□□□ 0.6
SF1-205ENST00000377394 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
SF1-205ENST00000377394 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
SF1-205ENST00000377394 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
SF1-205ENST00000377394 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
SF1-205ENST00000377394 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
SF1-205ENST00000377394 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms