RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 CAMSAP2Q08AD1 1489 aa31.28■■■□□ 2.6
RNF39-202ENST00000376751 ROCK1Q13464 1354 aa31.28■■■□□ 2.6
RNF39-202ENST00000376751 ATP10BO94823 1461 aa31.27■■■□□ 2.6
RNF39-202ENST00000376751 PPP1R15AO75807 674 aaPredicted RBP31.26■■■□□ 2.6
RNF39-202ENST00000376751 CENPBP07199 599 aaPredicted RBP31.26■■■□□ 2.6
RNF39-202ENST00000376751 TONSLQ96HA7 1378 aa31.22■■■□□ 2.59
RNF39-202ENST00000376751 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
RNF39-202ENST00000376751 CDC42BPAQ5VT25 1732 aa31.2■■■□□ 2.58
RNF39-202ENST00000376751 YTHDC1Q96MU7 727 aaKnown RBP31.19■■■□□ 2.58
RNF39-202ENST00000376751 CFDP1Q9UEE9 299 aaPredicted RBP31.19■■■□□ 2.58
RNF39-202ENST00000376751 KDM5BQ9UGL1 1544 aa31.19■■■□□ 2.58
RNF39-202ENST00000376751 PTPRGP23470 1445 aa31.19■■■□□ 2.58
RNF39-202ENST00000376751 ABCC10Q5T3U5 1492 aa31.18■■■□□ 2.58
RNF39-202ENST00000376751 TRIM52Q96A61 297 aa31.18■■■□□ 2.58
RNF39-202ENST00000376751 CROCC2H7BZ55 1655 aa31.17■■■□□ 2.58
RNF39-202ENST00000376751 ADGBQ8N7X0 1667 aa31.16■■■□□ 2.58
RNF39-202ENST00000376751 PLEKHD1A6NEE1 506 aa31.13■■■□□ 2.57
RNF39-202ENST00000376751 MPHOSPH9Q99550 1183 aa31.1■■■□□ 2.57
RNF39-202ENST00000376751 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
RNF39-202ENST00000376751 ZNF777Q9ULD5 760 aaPredicted RBP31.08■■■□□ 2.57
RNF39-202ENST00000376751 ADGRL2O95490 1459 aa31.07■■■□□ 2.56
RNF39-202ENST00000376751 NCOA1Q15788 1441 aa31.05■■■□□ 2.56
RNF39-202ENST00000376751 FOXD1Q16676 465 aa31.01■■■□□ 2.55
RNF39-202ENST00000376751 HIRIP3Q9BW71 556 aaPredicted RBP30.98■■■□□ 2.55
RNF39-202ENST00000376751 CLASP1Q7Z460 1538 aa30.97■■■□□ 2.55
RNF39-202ENST00000376751 PZPP20742 1482 aa30.95■■■□□ 2.55
RNF39-202ENST00000376751 ANKRD30BQ9BXX2 1392 aa30.95■■■□□ 2.54
RNF39-202ENST00000376751 SHANK2Q9UPX8 1470 aa30.94■■■□□ 2.54
RNF39-202ENST00000376751 CDC42BPBQ9Y5S2 1711 aa30.93■■■□□ 2.54
RNF39-202ENST00000376751 PREX2Q70Z35 1606 aa30.93■■■□□ 2.54
RNF39-202ENST00000376751 ABCC2Q92887 1545 aa30.92■■■□□ 2.54
RNF39-202ENST00000376751 ANKRD30AQ9BXX3 1397 aa30.92■■■□□ 2.54
RNF39-202ENST00000376751 GTF3C3Q9Y5Q9 886 aa30.91■■■□□ 2.54
RNF39-202ENST00000376751 DDX10Q13206 875 aaKnown RBP30.9■■■□□ 2.54
RNF39-202ENST00000376751 C9orf84Q5VXU9 1444 aa30.9■■■□□ 2.54
RNF39-202ENST00000376751 SAMD9LQ8IVG5 1584 aa30.89■■■□□ 2.53
RNF39-202ENST00000376751 ARHGEF5Q12774 1597 aa30.88■■■□□ 2.53
RNF39-202ENST00000376751 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
RNF39-202ENST00000376751 RPRD2Q5VT52 1461 aaKnown RBP30.88■■■□□ 2.53
RNF39-202ENST00000376751 TTC37Q6PGP7 1564 aa30.87■■■□□ 2.53
RNF39-202ENST00000376751 MBD5Q9P267 1494 aa30.84■■■□□ 2.53
RNF39-202ENST00000376751 ANKRD50Q9ULJ7 1429 aa30.83■■■□□ 2.53
RNF39-202ENST00000376751 TEX14Q8IWB6 1497 aa30.83■■■□□ 2.53
RNF39-202ENST00000376751 L3MBTL2Q969R5 705 aa30.82■■■□□ 2.52
RNF39-202ENST00000376751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.81■■■□□ 2.52
RNF39-202ENST00000376751 HNRNPMP52272 730 aaKnown RBP eCLIP30.79■■■□□ 2.52
RNF39-202ENST00000376751 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.51
RNF39-202ENST00000376751 KIAA1107Q9UPP5 1409 aa30.75■■■□□ 2.51
RNF39-202ENST00000376751 ZCCHC11Q5TAX3 1644 aaKnown RBP30.75■■■□□ 2.51
RNF39-202ENST00000376751 MYO5CQ9NQX4 1742 aa30.73■■■□□ 2.51
RNF39-202ENST00000376751 ARHGAP5Q13017 1502 aa30.72■■■□□ 2.51
RNF39-202ENST00000376751 SYCP2Q9BX26 1530 aa30.72■■■□□ 2.51
RNF39-202ENST00000376751 TSPY4P0CV99 314 aa30.72■■■□□ 2.51
RNF39-202ENST00000376751 TSPY10P0CW01 314 aa30.72■■■□□ 2.51
RNF39-202ENST00000376751 KCNH8Q96L42 1107 aa30.72■■■□□ 2.51
RNF39-202ENST00000376751 KIF15Q9NS87 1388 aa30.72■■■□□ 2.51
RNF39-202ENST00000376751 UHRF1BP1LA0JNW5 1464 aa30.71■■■□□ 2.51
RNF39-202ENST00000376751 KDM5DQ9BY66 1539 aa30.7■■■□□ 2.51
RNF39-202ENST00000376751 HSPA5P11021 654 aaKnown RBP30.68■■■□□ 2.5
RNF39-202ENST00000376751 PKD2Q13563 968 aa30.67■■■□□ 2.5
RNF39-202ENST00000376751 NBPF8Q3BBV2 869 aa30.66■■■□□ 2.5
RNF39-202ENST00000376751 NUP155O75694 1391 aa30.64■■■□□ 2.5
RNF39-202ENST00000376751 MAST1Q9Y2H9 1570 aa30.64■■■□□ 2.49
RNF39-202ENST00000376751 EIF4G2P78344 907 aaKnown RBP eCLIP30.58■■■□□ 2.49
RNF39-202ENST00000376751 RSPH4AQ5TD94 716 aa30.58■■■□□ 2.49
RNF39-202ENST00000376751 ARHGEF12Q9NZN5 1544 aa30.56■■■□□ 2.48
RNF39-202ENST00000376751 WASHC2AQ641Q2 1341 aa30.56■■■□□ 2.48
RNF39-202ENST00000376751 PLEKHH2Q8IVE3 1493 aa30.55■■■□□ 2.48
RNF39-202ENST00000376751 PLXNC1O60486 1568 aa30.53■■■□□ 2.48
RNF39-202ENST00000376751 PLCH2O75038 1416 aa30.53■■■□□ 2.48
RNF39-202ENST00000376751 ANP32CO43423 234 aa30.52■■■□□ 2.48
RNF39-202ENST00000376751 FAM135AQ9P2D6 1515 aa30.5■■■□□ 2.47
RNF39-202ENST00000376751 UNC13BO14795 1591 aa30.49■■■□□ 2.47
RNF39-202ENST00000376751 SPATA31E1Q6ZUB1 1445 aa30.48■■■□□ 2.47
RNF39-202ENST00000376751 CCER2I3L3R5 266 aa30.47■■■□□ 2.47
RNF39-202ENST00000376751 ABCC1P33527 1531 aa30.47■■■□□ 2.47
RNF39-202ENST00000376751 C11orf95C9JLR9 678 aaPredicted RBP30.44■■■□□ 2.46
RNF39-202ENST00000376751 CCDC7Q96M83 1385 aa30.41■■■□□ 2.46
RNF39-202ENST00000376751 POLR1AO95602 1720 aaPredicted RBP30.41■■■□□ 2.46
RNF39-202ENST00000376751 EFCAB2Q5VUJ9 269 aa30.39■■■□□ 2.46
RNF39-202ENST00000376751 DUOX2Q9NRD8 1548 aa30.38■■■□□ 2.45
RNF39-202ENST00000376751 CNTLNQ9NXG0 1405 aa30.38■■■□□ 2.45
RNF39-202ENST00000376751 TRAPPC8Q9Y2L5 1435 aa30.38■■■□□ 2.45
RNF39-202ENST00000376751 WDR7Q9Y4E6 1490 aa30.37■■■□□ 2.45
RNF39-202ENST00000376751 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
RNF39-202ENST00000376751 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
RNF39-202ENST00000376751 UHRF1BP1Q6BDS2 1440 aa30.37■■■□□ 2.45
RNF39-202ENST00000376751 ZNF326Q5BKZ1 582 aaKnown RBP30.34■■■□□ 2.45
RNF39-202ENST00000376751 MAGI2Q86UL8 1455 aa30.32■■■□□ 2.44
RNF39-202ENST00000376751 RALGAPBQ86X10 1494 aa30.31■■■□□ 2.44
RNF39-202ENST00000376751 KDM5CP41229 1560 aa30.31■■■□□ 2.44
RNF39-202ENST00000376751 ERBINQ96RT1 1412 aa30.31■■■□□ 2.44
RNF39-202ENST00000376751 PLA2R1Q13018 1463 aa30.29■■■□□ 2.44
RNF39-202ENST00000376751 KIF7Q2M1P5 1343 aa30.29■■■□□ 2.44
RNF39-202ENST00000376751 BCORL1Q5H9F3 1711 aa30.29■■■□□ 2.44
RNF39-202ENST00000376751 ABCA9Q8IUA7 1624 aa30.28■■■□□ 2.44
RNF39-202ENST00000376751 USP47Q96K76 1375 aa30.28■■■□□ 2.44
RNF39-202ENST00000376751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.28■■■□□ 2.44
RNF39-202ENST00000376751 ZFYVE16Q7Z3T8 1539 aa30.25■■■□□ 2.43
RNF39-202ENST00000376751 CCDC144AA2RUR9 1427 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms