RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CDC42BPAQ5VT25 1732 aa17.55■□□□□ 0.4
UBR4-203ENST00000375225 ABCC10Q5T3U5 1492 aa17.54■□□□□ 0.4
UBR4-203ENST00000375225 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.4
UBR4-203ENST00000375225 RIMBP3CA6NJZ7 1639 aa17.52■□□□□ 0.4
UBR4-203ENST00000375225 RIMBP3BA6NNM3 1639 aa17.52■□□□□ 0.4
UBR4-203ENST00000375225 RIMBP3Q9UFD9 1639 aa17.52■□□□□ 0.4
UBR4-203ENST00000375225 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
UBR4-203ENST00000375225 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
UBR4-203ENST00000375225 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
UBR4-203ENST00000375225 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
UBR4-203ENST00000375225 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
UBR4-203ENST00000375225 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBR4-203ENST00000375225 TTC37Q6PGP7 1564 aa17.48■□□□□ 0.39
UBR4-203ENST00000375225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBR4-203ENST00000375225 CAMSAP2Q08AD1 1489 aa17.47■□□□□ 0.39
UBR4-203ENST00000375225 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
UBR4-203ENST00000375225 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
UBR4-203ENST00000375225 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
UBR4-203ENST00000375225 DNMT1P26358 1616 aaKnown RBP17.46■□□□□ 0.39
UBR4-203ENST00000375225 NAIPQ13075 1403 aa17.45■□□□□ 0.38
UBR4-203ENST00000375225 CDC42BPBQ9Y5S2 1711 aa17.45■□□□□ 0.38
UBR4-203ENST00000375225 TONSLQ96HA7 1378 aa17.45■□□□□ 0.38
UBR4-203ENST00000375225 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
UBR4-203ENST00000375225 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
UBR4-203ENST00000375225 DAPK1P53355 1430 aa17.41■□□□□ 0.38
UBR4-203ENST00000375225 ARHGAP5Q13017 1502 aa17.41■□□□□ 0.38
UBR4-203ENST00000375225 CROCC2H7BZ55 1655 aa17.41■□□□□ 0.38
UBR4-203ENST00000375225 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
UBR4-203ENST00000375225 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
UBR4-203ENST00000375225 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
UBR4-203ENST00000375225 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
UBR4-203ENST00000375225 ABCA9Q8IUA7 1624 aa17.39■□□□□ 0.37
UBR4-203ENST00000375225 ADGBQ8N7X0 1667 aa17.39■□□□□ 0.37
UBR4-203ENST00000375225 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
UBR4-203ENST00000375225 ARAP3Q8WWN8 1544 aa17.38■□□□□ 0.37
UBR4-203ENST00000375225 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
UBR4-203ENST00000375225 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
UBR4-203ENST00000375225 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
UBR4-203ENST00000375225 ABCC5O15440 1437 aa17.36■□□□□ 0.37
UBR4-203ENST00000375225 PLCH2O75038 1416 aa17.36■□□□□ 0.37
UBR4-203ENST00000375225 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
UBR4-203ENST00000375225 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
UBR4-203ENST00000375225 SHANK2Q9UPX8 1470 aa17.34■□□□□ 0.37
UBR4-203ENST00000375225 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
UBR4-203ENST00000375225 RSPH4AQ5TD94 716 aa17.31■□□□□ 0.36
UBR4-203ENST00000375225 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
UBR4-203ENST00000375225 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
UBR4-203ENST00000375225 SYCP2Q9BX26 1530 aa17.3■□□□□ 0.36
UBR4-203ENST00000375225 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
UBR4-203ENST00000375225 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
UBR4-203ENST00000375225 CFAP74Q9C0B2 1584 aa17.29■□□□□ 0.36
UBR4-203ENST00000375225 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
UBR4-203ENST00000375225 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
UBR4-203ENST00000375225 MBD5Q9P267 1494 aa17.28■□□□□ 0.36
UBR4-203ENST00000375225 ABCC1P33527 1531 aa17.28■□□□□ 0.36
UBR4-203ENST00000375225 C9orf84Q5VXU9 1444 aa17.27■□□□□ 0.35
UBR4-203ENST00000375225 ANKRD30AQ9BXX3 1397 aa17.27■□□□□ 0.35
UBR4-203ENST00000375225 TSPY4P0CV99 314 aa17.26■□□□□ 0.35
UBR4-203ENST00000375225 TSPY10P0CW01 314 aa17.26■□□□□ 0.35
UBR4-203ENST00000375225 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
UBR4-203ENST00000375225 FANCAO15360 1455 aa17.25■□□□□ 0.35
UBR4-203ENST00000375225 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBR4-203ENST00000375225 NCOA1Q15788 1441 aa17.24■□□□□ 0.35
UBR4-203ENST00000375225 GLI2P10070 1586 aa17.22■□□□□ 0.35
UBR4-203ENST00000375225 ANP32CO43423 234 aa17.22■□□□□ 0.35
UBR4-203ENST00000375225 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
UBR4-203ENST00000375225 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
UBR4-203ENST00000375225 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
UBR4-203ENST00000375225 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.34
UBR4-203ENST00000375225 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
UBR4-203ENST00000375225 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
UBR4-203ENST00000375225 KDM6BO15054 1643 aa17.19■□□□□ 0.34
UBR4-203ENST00000375225 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
UBR4-203ENST00000375225 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
UBR4-203ENST00000375225 DIP2BQ9P265 1576 aa17.18■□□□□ 0.34
UBR4-203ENST00000375225 KIF15Q9NS87 1388 aa17.16■□□□□ 0.34
UBR4-203ENST00000375225 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
UBR4-203ENST00000375225 NEO1Q92859 1461 aa17.14■□□□□ 0.33
UBR4-203ENST00000375225 TRAPPC8Q9Y2L5 1435 aa17.14■□□□□ 0.33
UBR4-203ENST00000375225 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
UBR4-203ENST00000375225 RTEL1-TNFRSF6BF6WH68 1400 aa17.12■□□□□ 0.33
UBR4-203ENST00000375225 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
UBR4-203ENST00000375225 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
UBR4-203ENST00000375225 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
UBR4-203ENST00000375225 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
UBR4-203ENST00000375225 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
UBR4-203ENST00000375225 DENND4BO75064 1496 aaPredicted RBP17.11■□□□□ 0.33
UBR4-203ENST00000375225 ZNF518AQ6AHZ1 1483 aa17.11■□□□□ 0.33
UBR4-203ENST00000375225 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
UBR4-203ENST00000375225 ANKRD30BQ9BXX2 1392 aa17.1■□□□□ 0.33
UBR4-203ENST00000375225 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
UBR4-203ENST00000375225 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
UBR4-203ENST00000375225 FAM69CQ0P6D2 419 aa17.08■□□□□ 0.32
UBR4-203ENST00000375225 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
UBR4-203ENST00000375225 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
UBR4-203ENST00000375225 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
UBR4-203ENST00000375225 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
UBR4-203ENST00000375225 TSPOAP1O95153 1857 aa17.06■□□□□ 0.32
UBR4-203ENST00000375225 KDM5CP41229 1560 aa17.06■□□□□ 0.32
UBR4-203ENST00000375225 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms