RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
PHF1-202ENST00000374516 DAPK1P53355 1430 aa24.16■■□□□ 1.46
PHF1-202ENST00000374516 ABCC5O15440 1437 aa24.15■■□□□ 1.46
PHF1-202ENST00000374516 TRIM52Q96A61 297 aa24.15■■□□□ 1.46
PHF1-202ENST00000374516 ERCC6L2Q5T890 1561 aa24.13■■□□□ 1.45
PHF1-202ENST00000374516 KDM6BO15054 1643 aa24.11■■□□□ 1.45
PHF1-202ENST00000374516 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
PHF1-202ENST00000374516 AKNAQ7Z591 1439 aa24.09■■□□□ 1.45
PHF1-202ENST00000374516 ADCY10Q96PN6 1610 aa24.09■■□□□ 1.45
PHF1-202ENST00000374516 CAMSAP2Q08AD1 1489 aa24.09■■□□□ 1.45
PHF1-202ENST00000374516 DNMT1P26358 1616 aaKnown RBP24.08■■□□□ 1.45
PHF1-202ENST00000374516 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.44
PHF1-202ENST00000374516 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
PHF1-202ENST00000374516 TIMELESSQ9UNS1 1208 aa24.05■■□□□ 1.44
PHF1-202ENST00000374516 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
PHF1-202ENST00000374516 ABCC10Q5T3U5 1492 aa24.03■■□□□ 1.44
PHF1-202ENST00000374516 PPP1R15AO75807 674 aaPredicted RBP24.01■■□□□ 1.43
PHF1-202ENST00000374516 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
PHF1-202ENST00000374516 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
PHF1-202ENST00000374516 TONSLQ96HA7 1378 aa24■■□□□ 1.43
PHF1-202ENST00000374516 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
PHF1-202ENST00000374516 FOXD1Q16676 465 aa23.99■■□□□ 1.43
PHF1-202ENST00000374516 DENND4BO75064 1496 aaPredicted RBP23.99■■□□□ 1.43
PHF1-202ENST00000374516 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
PHF1-202ENST00000374516 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
PHF1-202ENST00000374516 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
PHF1-202ENST00000374516 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
PHF1-202ENST00000374516 KCNH8Q96L42 1107 aa23.93■■□□□ 1.42
PHF1-202ENST00000374516 HIRIP3Q9BW71 556 aaPredicted RBP23.89■■□□□ 1.41
PHF1-202ENST00000374516 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.41
PHF1-202ENST00000374516 ANKRD30AQ9BXX3 1397 aa23.88■■□□□ 1.41
PHF1-202ENST00000374516 TSPY4P0CV99 314 aa23.87■■□□□ 1.41
PHF1-202ENST00000374516 TSPY10P0CW01 314 aa23.87■■□□□ 1.41
PHF1-202ENST00000374516 CROCC2H7BZ55 1655 aa23.85■■□□□ 1.41
PHF1-202ENST00000374516 ADGRL2O95490 1459 aa23.84■■□□□ 1.41
PHF1-202ENST00000374516 C9orf84Q5VXU9 1444 aa23.84■■□□□ 1.41
PHF1-202ENST00000374516 ADGBQ8N7X0 1667 aa23.83■■□□□ 1.41
PHF1-202ENST00000374516 TTC37Q6PGP7 1564 aa23.82■■□□□ 1.4
PHF1-202ENST00000374516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.81■■□□□ 1.42e-7■■■■□ 20
PHF1-202ENST00000374516 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
PHF1-202ENST00000374516 ANP32EQ9BTT0 268 aa23.81■■□□□ 1.4
PHF1-202ENST00000374516 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
PHF1-202ENST00000374516 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
PHF1-202ENST00000374516 SAMD9LQ8IVG5 1584 aa23.79■■□□□ 1.4
PHF1-202ENST00000374516 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
PHF1-202ENST00000374516 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
PHF1-202ENST00000374516 ARHGAP5Q13017 1502 aa23.77■■□□□ 1.4
PHF1-202ENST00000374516 ZCCHC11Q5TAX3 1644 aaKnown RBP23.77■■□□□ 1.4
PHF1-202ENST00000374516 KDM5BQ9UGL1 1544 aa23.77■■□□□ 1.4
PHF1-202ENST00000374516 UHRF1BP1LA0JNW5 1464 aa23.77■■□□□ 1.4
PHF1-202ENST00000374516 SHANK2Q9UPX8 1470 aa23.76■■□□□ 1.39
PHF1-202ENST00000374516 PZPP20742 1482 aa23.76■■□□□ 1.39
PHF1-202ENST00000374516 L3MBTL2Q969R5 705 aa23.76■■□□□ 1.39
PHF1-202ENST00000374516 DDX10Q13206 875 aaKnown RBP23.75■■□□□ 1.39
PHF1-202ENST00000374516 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
PHF1-202ENST00000374516 CCDC141Q6ZP82 1450 aa23.73■■□□□ 1.39
PHF1-202ENST00000374516 ARHGEF5Q12774 1597 aa23.72■■□□□ 1.39
PHF1-202ENST00000374516 PKD2Q13563 968 aa23.72■■□□□ 1.39
PHF1-202ENST00000374516 FKBP8Q14318 412 aa23.72■■□□□ 1.39
PHF1-202ENST00000374516 SYCP2Q9BX26 1530 aa23.71■■□□□ 1.39
PHF1-202ENST00000374516 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
PHF1-202ENST00000374516 BCANQ96GW7 911 aa23.71■■□□□ 1.39
PHF1-202ENST00000374516 RSPH4AQ5TD94 716 aa23.71■■□□□ 1.39
PHF1-202ENST00000374516 NUP155O75694 1391 aa23.7■■□□□ 1.38
PHF1-202ENST00000374516 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
PHF1-202ENST00000374516 MYO5CQ9NQX4 1742 aa23.67■■□□□ 1.38
PHF1-202ENST00000374516 PLCH2O75038 1416 aa23.65■■□□□ 1.38
PHF1-202ENST00000374516 KIAA1107Q9UPP5 1409 aa23.65■■□□□ 1.38
PHF1-202ENST00000374516 EFCAB2Q5VUJ9 269 aa23.64■■□□□ 1.37
PHF1-202ENST00000374516 ARHGEF12Q9NZN5 1544 aa23.62■■□□□ 1.37
PHF1-202ENST00000374516 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
PHF1-202ENST00000374516 CCER2I3L3R5 266 aa23.59■■□□□ 1.37
PHF1-202ENST00000374516 PLEKHH2Q8IVE3 1493 aa23.58■■□□□ 1.37
PHF1-202ENST00000374516 TEX14Q8IWB6 1497 aa23.58■■□□□ 1.37
PHF1-202ENST00000374516 HSPA5P11021 654 aaKnown RBP23.57■■□□□ 1.36
PHF1-202ENST00000374516 WDR7Q9Y4E6 1490 aa23.56■■□□□ 1.36
PHF1-202ENST00000374516 NEFLP07196 543 aa23.56■■□□□ 1.36
PHF1-202ENST00000374516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.366e-7■■■□□ 15
PHF1-202ENST00000374516 TRAPPC8Q9Y2L5 1435 aa23.53■■□□□ 1.36
PHF1-202ENST00000374516 ANP32CO43423 234 aa23.53■■□□□ 1.36
PHF1-202ENST00000374516 EIF4G2P78344 907 aaKnown RBP eCLIP23.53■■□□□ 1.36
PHF1-202ENST00000374516 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
PHF1-202ENST00000374516 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.35
PHF1-202ENST00000374516 RBM19Q9Y4C8 960 aaKnown RBP23.51■■□□□ 1.35
PHF1-202ENST00000374516 KDM5DQ9BY66 1539 aa23.5■■□□□ 1.35
PHF1-202ENST00000374516 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
PHF1-202ENST00000374516 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
PHF1-202ENST00000374516 ABCC1P33527 1531 aa23.49■■□□□ 1.35
PHF1-202ENST00000374516 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
PHF1-202ENST00000374516 FAM135AQ9P2D6 1515 aa23.47■■□□□ 1.35
PHF1-202ENST00000374516 SPAG9O60271 1321 aaKnown RBP23.45■■□□□ 1.34
PHF1-202ENST00000374516 PLXNC1O60486 1568 aa23.44■■□□□ 1.34
PHF1-202ENST00000374516 WASHC2AQ641Q2 1341 aa23.43■■□□□ 1.34
PHF1-202ENST00000374516 FANCAO15360 1455 aa23.43■■□□□ 1.34
PHF1-202ENST00000374516 DUOX2Q9NRD8 1548 aa23.42■■□□□ 1.34
PHF1-202ENST00000374516 ARAP3Q8WWN8 1544 aa23.4■■□□□ 1.34
PHF1-202ENST00000374516 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
PHF1-202ENST00000374516 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.34
PHF1-202ENST00000374516 ABCA9Q8IUA7 1624 aa23.39■■□□□ 1.33
PHF1-202ENST00000374516 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms