RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 CFDP1Q9UEE9 299 aaPredicted RBP34.42■■■■□ 3.1
SNX21-204ENST00000372542 ABCC10Q5T3U5 1492 aa34.4■■■■□ 3.1
SNX21-204ENST00000372542 SIN3AQ96ST3 1273 aa34.37■■■■□ 3.09
SNX21-204ENST00000372542 CDC42BPAQ5VT25 1732 aa34.37■■■■□ 3.09
SNX21-204ENST00000372542 ZNF644Q9H582 1327 aaPredicted RBP34.35■■■■□ 3.09
SNX21-204ENST00000372542 NEUROD1Q13562 356 aa34.32■■■■□ 3.08
SNX21-204ENST00000372542 ADGBQ8N7X0 1667 aa34.31■■■■□ 3.08
SNX21-204ENST00000372542 ABCC2Q92887 1545 aa34.31■■■■□ 3.08
SNX21-204ENST00000372542 CROCC2H7BZ55 1655 aa34.31■■■■□ 3.08
SNX21-204ENST00000372542 KDM6BO15054 1643 aa34.3■■■■□ 3.08
SNX21-204ENST00000372542 ERCC6L2Q5T890 1561 aa34.3■■■■□ 3.08
SNX21-204ENST00000372542 ADGRL2O95490 1459 aa34.25■■■■□ 3.07
SNX21-204ENST00000372542 TRIM52Q96A61 297 aa34.2■■■■□ 3.07
SNX21-204ENST00000372542 SHANK2Q9UPX8 1470 aa34.19■■■■□ 3.06
SNX21-204ENST00000372542 ZNF777Q9ULD5 760 aaPredicted RBP34.19■■■■□ 3.06
SNX21-204ENST00000372542 UHRF1BP1LA0JNW5 1464 aa34.19■■■■□ 3.06
SNX21-204ENST00000372542 TONSLQ96HA7 1378 aa34.19■■■■□ 3.06
SNX21-204ENST00000372542 NCOA1Q15788 1441 aa34.17■■■■□ 3.06
SNX21-204ENST00000372542 PREX2Q70Z35 1606 aa34.16■■■■□ 3.06
SNX21-204ENST00000372542 PPP1R15AO75807 674 aaPredicted RBP34.16■■■■□ 3.06
SNX21-204ENST00000372542 DENND4BO75064 1496 aaPredicted RBP34.14■■■■□ 3.06
SNX21-204ENST00000372542 ANKRD30AQ9BXX3 1397 aa34.13■■■■□ 3.05
SNX21-204ENST00000372542 ARHGEF5Q12774 1597 aa34.13■■■■□ 3.05
SNX21-204ENST00000372542 MPHOSPH9Q99550 1183 aa34.12■■■■□ 3.05
SNX21-204ENST00000372542 CDC42BPBQ9Y5S2 1711 aa34.1■■■■□ 3.05
SNX21-204ENST00000372542 ZCCHC11Q5TAX3 1644 aaKnown RBP34.05■■■■□ 3.04
SNX21-204ENST00000372542 KDM5BQ9UGL1 1544 aa34.05■■■■□ 3.04
SNX21-204ENST00000372542 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
SNX21-204ENST00000372542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.04■■■■□ 3.04
SNX21-204ENST00000372542 SAMD9LQ8IVG5 1584 aa34.02■■■■□ 3.04
SNX21-204ENST00000372542 TTC37Q6PGP7 1564 aa34.02■■■■□ 3.04
SNX21-204ENST00000372542 RSPH4AQ5TD94 716 aa34.01■■■■□ 3.03
SNX21-204ENST00000372542 MYO5CQ9NQX4 1742 aa34■■■■□ 3.03
SNX21-204ENST00000372542 MBD5Q9P267 1494 aa33.99■■■■□ 3.03
SNX21-204ENST00000372542 TSPY4P0CV99 314 aa33.98■■■■□ 3.03
SNX21-204ENST00000372542 TSPY10P0CW01 314 aa33.98■■■■□ 3.03
SNX21-204ENST00000372542 MIER1Q8N108 512 aa33.98■■■■□ 3.03
SNX21-204ENST00000372542 CCDC141Q6ZP82 1450 aa33.97■■■■□ 3.03
SNX21-204ENST00000372542 ANKRD50Q9ULJ7 1429 aa33.95■■■■□ 3.03
SNX21-204ENST00000372542 ARHGAP5Q13017 1502 aa33.94■■■■□ 3.02
SNX21-204ENST00000372542 PLEKHH2Q8IVE3 1493 aa33.93■■■■□ 3.02
SNX21-204ENST00000372542 PZPP20742 1482 aa33.93■■■■□ 3.02
SNX21-204ENST00000372542 ANKRD30BQ9BXX2 1392 aa33.93■■■■□ 3.02
SNX21-204ENST00000372542 SLC4A1APQ9BWU0 796 aaKnown RBP33.91■■■■□ 3.02
SNX21-204ENST00000372542 HNRNPMP52272 730 aaKnown RBP eCLIP33.89■■■■□ 3.02
SNX21-204ENST00000372542 MAST1Q9Y2H9 1570 aa33.88■■■■□ 3.01
SNX21-204ENST00000372542 KIAA1107Q9UPP5 1409 aa33.87■■■■□ 3.01
SNX21-204ENST00000372542 RPRD2Q5VT52 1461 aaKnown RBP33.85■■■■□ 3.01
SNX21-204ENST00000372542 SYCP2Q9BX26 1530 aa33.84■■■■□ 3.01
SNX21-204ENST00000372542 PLCH2O75038 1416 aa33.83■■■■□ 3.01
SNX21-204ENST00000372542 KIF15Q9NS87 1388 aa33.83■■■■□ 3.01
SNX21-204ENST00000372542 CENPBP07199 599 aaPredicted RBP33.83■■■■□ 3.01
SNX21-204ENST00000372542 KDM5DQ9BY66 1539 aa33.83■■■■□ 3.01
SNX21-204ENST00000372542 FOXD1Q16676 465 aa33.79■■■■□ 3
SNX21-204ENST00000372542 KCNH8Q96L42 1107 aa33.79■■■■□ 3
SNX21-204ENST00000372542 ARAP3Q8WWN8 1544 aa33.77■■■■□ 3
SNX21-204ENST00000372542 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
SNX21-204ENST00000372542 PLXNC1O60486 1568 aa33.73■■■□□ 2.99
SNX21-204ENST00000372542 EFCAB2Q5VUJ9 269 aa33.72■■■□□ 2.99
SNX21-204ENST00000372542 WDR7Q9Y4E6 1490 aa33.72■■■□□ 2.99
SNX21-204ENST00000372542 TEX14Q8IWB6 1497 aa33.7■■■□□ 2.99
SNX21-204ENST00000372542 NUP155O75694 1391 aa33.7■■■□□ 2.99
SNX21-204ENST00000372542 L3MBTL2Q969R5 705 aa33.69■■■□□ 2.98
SNX21-204ENST00000372542 ABCC1P33527 1531 aa33.67■■■□□ 2.98
SNX21-204ENST00000372542 PKD2Q13563 968 aa33.66■■■□□ 2.98
SNX21-204ENST00000372542 ARHGEF12Q9NZN5 1544 aa33.64■■■□□ 2.98
SNX21-204ENST00000372542 UNC13BO14795 1591 aa33.6■■■□□ 2.97
SNX21-204ENST00000372542 ABCA9Q8IUA7 1624 aa33.6■■■□□ 2.97
SNX21-204ENST00000372542 DUOX2Q9NRD8 1548 aa33.59■■■□□ 2.97
SNX21-204ENST00000372542 FAM135AQ9P2D6 1515 aa33.54■■■□□ 2.96
SNX21-204ENST00000372542 DDX10Q13206 875 aaKnown RBP33.54■■■□□ 2.96
SNX21-204ENST00000372542 ERBINQ96RT1 1412 aa33.53■■■□□ 2.96
SNX21-204ENST00000372542 HIRIP3Q9BW71 556 aaPredicted RBP33.52■■■□□ 2.96
SNX21-204ENST00000372542 ASXL2Q76L83 1435 aa33.52■■■□□ 2.96
SNX21-204ENST00000372542 RTEL1-TNFRSF6BF6WH68 1400 aa33.49■■■□□ 2.95
SNX21-204ENST00000372542 EIF4G2P78344 907 aaKnown RBP eCLIP33.49■■■□□ 2.95
SNX21-204ENST00000372542 YTHDC1Q96MU7 727 aaKnown RBP33.49■■■□□ 2.95
SNX21-204ENST00000372542 TRAPPC8Q9Y2L5 1435 aa33.49■■■□□ 2.95
SNX21-204ENST00000372542 IQGAP3Q86VI3 1631 aa33.46■■■□□ 2.95
SNX21-204ENST00000372542 HSPA5P11021 654 aaKnown RBP33.45■■■□□ 2.95
SNX21-204ENST00000372542 FANCAO15360 1455 aa33.45■■■□□ 2.95
SNX21-204ENST00000372542 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
SNX21-204ENST00000372542 NPM1P06748 294 aaKnown RBP eCLIP33.44■■■□□ 2.94
SNX21-204ENST00000372542 NBPF8Q3BBV2 869 aa33.44■■■□□ 2.94
SNX21-204ENST00000372542 SPAG9O60271 1321 aaKnown RBP33.4■■■□□ 2.94
SNX21-204ENST00000372542 ZFYVE16Q7Z3T8 1539 aa33.39■■■□□ 2.94
SNX21-204ENST00000372542 SCAF1Q9H7N4 1312 aaKnown RBP33.38■■■□□ 2.93
SNX21-204ENST00000372542 UHRF1BP1Q6BDS2 1440 aa33.35■■■□□ 2.93
SNX21-204ENST00000372542 INO80Q9ULG1 1556 aaPredicted RBP33.33■■■□□ 2.93
SNX21-204ENST00000372542 ADGRL1O94910 1474 aa33.32■■■□□ 2.93
SNX21-204ENST00000372542 ATP7AQ04656 1500 aa33.29■■■□□ 2.92
SNX21-204ENST00000372542 SPATA31E1Q6ZUB1 1445 aa33.29■■■□□ 2.92
SNX21-204ENST00000372542 ANP32CO43423 234 aa33.28■■■□□ 2.92
SNX21-204ENST00000372542 AFAP1Q8N556 730 aa33.28■■■□□ 2.92
SNX21-204ENST00000372542 CFAP74Q9C0B2 1584 aa33.28■■■□□ 2.92
SNX21-204ENST00000372542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.28■■■□□ 2.923e-6■■□□□ 11.7
SNX21-204ENST00000372542 CCDC144AA2RUR9 1427 aa33.27■■■□□ 2.92
SNX21-204ENST00000372542 SCAPERQ9BY12 1400 aa33.27■■■□□ 2.92
SNX21-204ENST00000372542 WASHC2AQ641Q2 1341 aa33.26■■■□□ 2.91
SNX21-204ENST00000372542 ATP10AO60312 1499 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms