RNA–Protein interactions for RNA: ENST00000372105.3

LRIT1-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT1, Length 2,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1-201ENST00000372105 GPATCH8Q9UKJ3 1502 aaKnown RBP22.61■■□□□ 1.21
LRIT1-201ENST00000372105 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
LRIT1-201ENST00000372105 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.21
LRIT1-201ENST00000372105 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
LRIT1-201ENST00000372105 TIMELESSQ9UNS1 1208 aa22.58■■□□□ 1.2
LRIT1-201ENST00000372105 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
LRIT1-201ENST00000372105 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
LRIT1-201ENST00000372105 UHRF1BP1LA0JNW5 1464 aa22.57■■□□□ 1.2
LRIT1-201ENST00000372105 CDC42BPAQ5VT25 1732 aa22.55■■□□□ 1.2
LRIT1-201ENST00000372105 CHIC2Q9UKJ5 165 aa22.54■■□□□ 1.2
LRIT1-201ENST00000372105 NAIPQ13075 1403 aa22.54■■□□□ 1.2
LRIT1-201ENST00000372105 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
LRIT1-201ENST00000372105 KCNH8Q96L42 1107 aa22.53■■□□□ 1.2
LRIT1-201ENST00000372105 DNMT1P26358 1616 aaKnown RBP22.53■■□□□ 1.2
LRIT1-201ENST00000372105 DAPK1P53355 1430 aa22.52■■□□□ 1.2
LRIT1-201ENST00000372105 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
LRIT1-201ENST00000372105 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
LRIT1-201ENST00000372105 ZNF777Q9ULD5 760 aaPredicted RBP22.5■■□□□ 1.19
LRIT1-201ENST00000372105 ABCC5O15440 1437 aa22.5■■□□□ 1.19
LRIT1-201ENST00000372105 FKBP8Q14318 412 aa22.5■■□□□ 1.19
LRIT1-201ENST00000372105 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
LRIT1-201ENST00000372105 KDM5BQ9UGL1 1544 aa22.49■■□□□ 1.19
LRIT1-201ENST00000372105 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
LRIT1-201ENST00000372105 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
LRIT1-201ENST00000372105 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
LRIT1-201ENST00000372105 NEFLP07196 543 aa22.46■■□□□ 1.19
LRIT1-201ENST00000372105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.43■■□□□ 1.18
LRIT1-201ENST00000372105 ROCK1Q13464 1354 aa22.42■■□□□ 1.18
LRIT1-201ENST00000372105 TTC37Q6PGP7 1564 aa22.42■■□□□ 1.18
LRIT1-201ENST00000372105 PREX2Q70Z35 1606 aa22.42■■□□□ 1.18
LRIT1-201ENST00000372105 DDX10Q13206 875 aaKnown RBP22.42■■□□□ 1.18
LRIT1-201ENST00000372105 CDC42BPBQ9Y5S2 1711 aa22.41■■□□□ 1.18
LRIT1-201ENST00000372105 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
LRIT1-201ENST00000372105 BCANQ96GW7 911 aa22.39■■□□□ 1.18
LRIT1-201ENST00000372105 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.17
LRIT1-201ENST00000372105 RBM19Q9Y4C8 960 aaKnown RBP22.39■■□□□ 1.17
LRIT1-201ENST00000372105 KDM6BO15054 1643 aa22.39■■□□□ 1.17
LRIT1-201ENST00000372105 ADGBQ8N7X0 1667 aa22.35■■□□□ 1.17
LRIT1-201ENST00000372105 MYO5CQ9NQX4 1742 aa22.35■■□□□ 1.17
LRIT1-201ENST00000372105 SAMD9LQ8IVG5 1584 aa22.35■■□□□ 1.17
LRIT1-201ENST00000372105 ARHGAP5Q13017 1502 aa22.34■■□□□ 1.17
LRIT1-201ENST00000372105 ANP32CO43423 234 aa22.33■■□□□ 1.16
LRIT1-201ENST00000372105 ADGRL2O95490 1459 aa22.32■■□□□ 1.16
LRIT1-201ENST00000372105 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
LRIT1-201ENST00000372105 HNRNPMP52272 730 aaKnown RBP eCLIP22.31■■□□□ 1.16
LRIT1-201ENST00000372105 ARHGEF5Q12774 1597 aa22.3■■□□□ 1.16
LRIT1-201ENST00000372105 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
LRIT1-201ENST00000372105 MBD5Q9P267 1494 aa22.3■■□□□ 1.16
LRIT1-201ENST00000372105 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
LRIT1-201ENST00000372105 WDR7Q9Y4E6 1490 aa22.3■■□□□ 1.16
LRIT1-201ENST00000372105 SIN3AQ96ST3 1273 aa22.29■■□□□ 1.16
LRIT1-201ENST00000372105 ANKRD30AQ9BXX3 1397 aa22.28■■□□□ 1.16
LRIT1-201ENST00000372105 C9orf84Q5VXU9 1444 aa22.27■■□□□ 1.16
LRIT1-201ENST00000372105 PLCH2O75038 1416 aa22.27■■□□□ 1.16
LRIT1-201ENST00000372105 TSPY4P0CV99 314 aa22.26■■□□□ 1.15
LRIT1-201ENST00000372105 TSPY10P0CW01 314 aa22.26■■□□□ 1.15
LRIT1-201ENST00000372105 CCDC141Q6ZP82 1450 aa22.25■■□□□ 1.15
LRIT1-201ENST00000372105 SYCP2Q9BX26 1530 aa22.24■■□□□ 1.15
LRIT1-201ENST00000372105 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
LRIT1-201ENST00000372105 RSPH4AQ5TD94 716 aa22.23■■□□□ 1.15
LRIT1-201ENST00000372105 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
LRIT1-201ENST00000372105 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
LRIT1-201ENST00000372105 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
LRIT1-201ENST00000372105 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
LRIT1-201ENST00000372105 KIAA1107Q9UPP5 1409 aa22.2■■□□□ 1.14
LRIT1-201ENST00000372105 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
LRIT1-201ENST00000372105 MPHOSPH9Q99550 1183 aa22.19■■□□□ 1.14
LRIT1-201ENST00000372105 ABCA9Q8IUA7 1624 aa22.17■■□□□ 1.14
LRIT1-201ENST00000372105 ANKRD50Q9ULJ7 1429 aa22.17■■□□□ 1.14
LRIT1-201ENST00000372105 ARAP3Q8WWN8 1544 aa22.17■■□□□ 1.14
LRIT1-201ENST00000372105 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
LRIT1-201ENST00000372105 ERICH6BQ5W0A0 696 aa22.15■■□□□ 1.14
LRIT1-201ENST00000372105 KIF15Q9NS87 1388 aa22.15■■□□□ 1.14
LRIT1-201ENST00000372105 MAST1Q9Y2H9 1570 aa22.15■■□□□ 1.14
LRIT1-201ENST00000372105 ABCC1P33527 1531 aa22.14■■□□□ 1.14
LRIT1-201ENST00000372105 TONSLQ96HA7 1378 aa22.13■■□□□ 1.13
LRIT1-201ENST00000372105 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
LRIT1-201ENST00000372105 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
LRIT1-201ENST00000372105 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
LRIT1-201ENST00000372105 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
LRIT1-201ENST00000372105 PZPP20742 1482 aa22.1■■□□□ 1.13
LRIT1-201ENST00000372105 MSH5O43196 834 aa22.08■■□□□ 1.13
LRIT1-201ENST00000372105 FOXD1Q16676 465 aa22.08■■□□□ 1.13
LRIT1-201ENST00000372105 FANCAO15360 1455 aa22.08■■□□□ 1.13
LRIT1-201ENST00000372105 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
LRIT1-201ENST00000372105 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
LRIT1-201ENST00000372105 PLXNC1O60486 1568 aa22.06■■□□□ 1.12
LRIT1-201ENST00000372105 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
LRIT1-201ENST00000372105 MYT1LQ9UL68 1186 aa22.04■■□□□ 1.12
LRIT1-201ENST00000372105 ANKRD30BQ9BXX2 1392 aa22.02■■□□□ 1.12
LRIT1-201ENST00000372105 NUP155O75694 1391 aa22.01■■□□□ 1.11
LRIT1-201ENST00000372105 KDM5DQ9BY66 1539 aa22■■□□□ 1.11
LRIT1-201ENST00000372105 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
LRIT1-201ENST00000372105 ADGRL1O94910 1474 aa21.99■■□□□ 1.11
LRIT1-201ENST00000372105 DUOX2Q9NRD8 1548 aa21.98■■□□□ 1.11
LRIT1-201ENST00000372105 CD109Q6YHK3 1445 aa21.98■■□□□ 1.11
LRIT1-201ENST00000372105 SPAG9O60271 1321 aaKnown RBP21.98■■□□□ 1.11
LRIT1-201ENST00000372105 HNRNPUQ00839 825 aaKnown RBP eCLIP21.97■■□□□ 1.11
LRIT1-201ENST00000372105 PKD2Q13563 968 aa21.97■■□□□ 1.11
LRIT1-201ENST00000372105 SCAPERQ9BY12 1400 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms