RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 DNMT1P26358 1616 aaKnown RBP34.48■■■■□ 3.11
LHX3-201ENST00000371746 ITSN2Q9NZM3 1697 aa34.47■■■■□ 3.11
LHX3-201ENST00000371746 KDM6BO15054 1643 aa34.46■■■■□ 3.11
LHX3-201ENST00000371746 CLASP1Q7Z460 1538 aa34.46■■■■□ 3.11
LHX3-201ENST00000371746 ABCC10Q5T3U5 1492 aa34.43■■■■□ 3.1
LHX3-201ENST00000371746 ROCK1Q13464 1354 aa34.41■■■■□ 3.1
LHX3-201ENST00000371746 TRIM52Q96A61 297 aa34.4■■■■□ 3.1
LHX3-201ENST00000371746 CDC42BPAQ5VT25 1732 aa34.34■■■■□ 3.09
LHX3-201ENST00000371746 ABCC2Q92887 1545 aa34.32■■■■□ 3.08
LHX3-201ENST00000371746 TIMELESSQ9UNS1 1208 aa34.31■■■■□ 3.08
LHX3-201ENST00000371746 DENND4BO75064 1496 aaPredicted RBP34.29■■■■□ 3.08
LHX3-201ENST00000371746 MPHOSPH9Q99550 1183 aa34.24■■■■□ 3.07
LHX3-201ENST00000371746 NCOA1Q15788 1441 aa34.24■■■■□ 3.07
LHX3-201ENST00000371746 TONSLQ96HA7 1378 aa34.23■■■■□ 3.07
LHX3-201ENST00000371746 PPP1R15AO75807 674 aaPredicted RBP34.21■■■■□ 3.07
LHX3-201ENST00000371746 CROCC2H7BZ55 1655 aa34.18■■■■□ 3.06
LHX3-201ENST00000371746 FOXD1Q16676 465 aa34.17■■■■□ 3.06
LHX3-201ENST00000371746 MIER1Q8N108 512 aa34.17■■■■□ 3.06
LHX3-201ENST00000371746 ADGRL2O95490 1459 aa34.16■■■■□ 3.06
LHX3-201ENST00000371746 HNRNPMP52272 730 aaKnown RBP eCLIP34.15■■■■□ 3.06
LHX3-201ENST00000371746 ADGBQ8N7X0 1667 aa34.14■■■■□ 3.06
LHX3-201ENST00000371746 ANKRD30AQ9BXX3 1397 aa34.14■■■■□ 3.06
LHX3-201ENST00000371746 KCNH8Q96L42 1107 aa34.13■■■■□ 3.05
LHX3-201ENST00000371746 TTC37Q6PGP7 1564 aa34.13■■■■□ 3.05
LHX3-201ENST00000371746 C9orf84Q5VXU9 1444 aa34.11■■■■□ 3.05
LHX3-201ENST00000371746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.11■■■■□ 3.05
LHX3-201ENST00000371746 UHRF1BP1LA0JNW5 1464 aa34.1■■■■□ 3.05
LHX3-201ENST00000371746 PREX2Q70Z35 1606 aa34.1■■■■□ 3.05
LHX3-201ENST00000371746 CDC42BPBQ9Y5S2 1711 aa34.09■■■■□ 3.05
LHX3-201ENST00000371746 ZCCHC11Q5TAX3 1644 aaKnown RBP34.08■■■■□ 3.05
LHX3-201ENST00000371746 SAMD9LQ8IVG5 1584 aa34.07■■■■□ 3.04
LHX3-201ENST00000371746 MBD5Q9P267 1494 aa34.07■■■■□ 3.04
LHX3-201ENST00000371746 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.04
LHX3-201ENST00000371746 TSPY4P0CV99 314 aa34.06■■■■□ 3.04
LHX3-201ENST00000371746 TSPY10P0CW01 314 aa34.06■■■■□ 3.04
LHX3-201ENST00000371746 SLC4A1APQ9BWU0 796 aaKnown RBP34.06■■■■□ 3.04
LHX3-201ENST00000371746 KDM5BQ9UGL1 1544 aa34.06■■■■□ 3.04
LHX3-201ENST00000371746 ACIN1Q9UKV3 1341 aaKnown RBP34.06■■■■□ 3.04
LHX3-201ENST00000371746 ARHGAP5Q13017 1502 aa34.03■■■■□ 3.04
LHX3-201ENST00000371746 ANKRD50Q9ULJ7 1429 aa34.03■■■■□ 3.04
LHX3-201ENST00000371746 ARHGEF5Q12774 1597 aa34■■■■□ 3.03
LHX3-201ENST00000371746 PZPP20742 1482 aa33.99■■■■□ 3.03
LHX3-201ENST00000371746 CCDC141Q6ZP82 1450 aa33.98■■■■□ 3.03
LHX3-201ENST00000371746 ANKRD30BQ9BXX2 1392 aa33.98■■■■□ 3.03
LHX3-201ENST00000371746 SYCP2Q9BX26 1530 aa33.96■■■■□ 3.03
LHX3-201ENST00000371746 KIF15Q9NS87 1388 aa33.95■■■■□ 3.02
LHX3-201ENST00000371746 HIRIP3Q9BW71 556 aaPredicted RBP33.94■■■■□ 3.02
LHX3-201ENST00000371746 OSCARQ8IYS5 282 aa33.94■■■■□ 3.02
LHX3-201ENST00000371746 MYO5CQ9NQX4 1742 aa33.91■■■■□ 3.02
LHX3-201ENST00000371746 RSPH4AQ5TD94 716 aa33.89■■■■□ 3.02
LHX3-201ENST00000371746 PLCH2O75038 1416 aa33.87■■■■□ 3.01
LHX3-201ENST00000371746 L3MBTL2Q969R5 705 aa33.86■■■■□ 3.01
LHX3-201ENST00000371746 RPRD2Q5VT52 1461 aaKnown RBP33.85■■■■□ 3.01
LHX3-201ENST00000371746 NUP155O75694 1391 aa33.84■■■■□ 3.01
LHX3-201ENST00000371746 PKD2Q13563 968 aa33.83■■■■□ 3.01
LHX3-201ENST00000371746 KIAA1107Q9UPP5 1409 aa33.81■■■■□ 3
LHX3-201ENST00000371746 YTHDC1Q96MU7 727 aaKnown RBP33.81■■■■□ 3
LHX3-201ENST00000371746 ARHGEF12Q9NZN5 1544 aa33.81■■■■□ 3
LHX3-201ENST00000371746 PLEKHH2Q8IVE3 1493 aa33.8■■■■□ 3
LHX3-201ENST00000371746 EFCAB2Q5VUJ9 269 aa33.79■■■■□ 3
LHX3-201ENST00000371746 WDR7Q9Y4E6 1490 aa33.78■■■■□ 3
LHX3-201ENST00000371746 TEX14Q8IWB6 1497 aa33.74■■■□□ 2.99
LHX3-201ENST00000371746 DDX10Q13206 875 aaKnown RBP33.74■■■□□ 2.99
LHX3-201ENST00000371746 MAST1Q9Y2H9 1570 aa33.72■■■□□ 2.99
LHX3-201ENST00000371746 CENPBP07199 599 aaPredicted RBP33.7■■■□□ 2.98
LHX3-201ENST00000371746 KDM5DQ9BY66 1539 aa33.69■■■□□ 2.98
LHX3-201ENST00000371746 ABCC1P33527 1531 aa33.68■■■□□ 2.98
LHX3-201ENST00000371746 ASXL2Q76L83 1435 aa33.66■■■□□ 2.98
LHX3-201ENST00000371746 TRAPPC8Q9Y2L5 1435 aa33.66■■■□□ 2.98
LHX3-201ENST00000371746 NBPF8Q3BBV2 869 aa33.63■■■□□ 2.97
LHX3-201ENST00000371746 PLXNC1O60486 1568 aa33.62■■■□□ 2.97
LHX3-201ENST00000371746 ARAP3Q8WWN8 1544 aa33.6■■■□□ 2.97
LHX3-201ENST00000371746 FAM135AQ9P2D6 1515 aa33.58■■■□□ 2.97
LHX3-201ENST00000371746 HSPA5P11021 654 aaKnown RBP33.58■■■□□ 2.97
LHX3-201ENST00000371746 AFAP1Q8N556 730 aa33.58■■■□□ 2.97
LHX3-201ENST00000371746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.57■■■□□ 2.96
LHX3-201ENST00000371746 FANCAO15360 1455 aa33.55■■■□□ 2.96
LHX3-201ENST00000371746 ABCA9Q8IUA7 1624 aa33.55■■■□□ 2.96
LHX3-201ENST00000371746 NPM1P06748 294 aaKnown RBP eCLIP33.55■■■□□ 2.96
LHX3-201ENST00000371746 SCAF1Q9H7N4 1312 aaKnown RBP33.53■■■□□ 2.96
LHX3-201ENST00000371746 DUOX2Q9NRD8 1548 aa33.53■■■□□ 2.96
LHX3-201ENST00000371746 EIF4G2P78344 907 aaKnown RBP eCLIP33.53■■■□□ 2.96
LHX3-201ENST00000371746 SPAG9O60271 1321 aaKnown RBP33.52■■■□□ 2.96
LHX3-201ENST00000371746 UNC13BO14795 1591 aa33.5■■■□□ 2.95
LHX3-201ENST00000371746 ERBINQ96RT1 1412 aa33.48■■■□□ 2.95
LHX3-201ENST00000371746 ZNF326Q5BKZ1 582 aaKnown RBP33.45■■■□□ 2.95
LHX3-201ENST00000371746 ZFYVE16Q7Z3T8 1539 aa33.43■■■□□ 2.94
LHX3-201ENST00000371746 ADGRL1O94910 1474 aa33.42■■■□□ 2.94
LHX3-201ENST00000371746 SCAPERQ9BY12 1400 aa33.41■■■□□ 2.94
LHX3-201ENST00000371746 RTEL1-TNFRSF6BF6WH68 1400 aa33.41■■■□□ 2.94
LHX3-201ENST00000371746 WASHC2AQ641Q2 1341 aa33.4■■■□□ 2.94
LHX3-201ENST00000371746 IQGAP3Q86VI3 1631 aa33.37■■■□□ 2.93
LHX3-201ENST00000371746 MAGI2Q86UL8 1455 aa33.37■■■□□ 2.93
LHX3-201ENST00000371746 PLA2R1Q13018 1463 aa33.35■■■□□ 2.93
LHX3-201ENST00000371746 MYT1LQ9UL68 1186 aa33.33■■■□□ 2.93
LHX3-201ENST00000371746 CCDC144AA2RUR9 1427 aa33.33■■■□□ 2.93
LHX3-201ENST00000371746 ATP7AQ04656 1500 aa33.32■■■□□ 2.92
LHX3-201ENST00000371746 SPATA31E1Q6ZUB1 1445 aa33.32■■■□□ 2.92
LHX3-201ENST00000371746 C11orf95C9JLR9 678 aaPredicted RBP33.31■■■□□ 2.92
LHX3-201ENST00000371746 KDM2AQ9Y2K7 1162 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms