RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 KDM5CP41229 1560 aa18.57■□□□□ 0.56
EXOSC1-204ENST00000370902 ARHGEF12Q9NZN5 1544 aa18.57■□□□□ 0.56
EXOSC1-204ENST00000370902 FMN1Q68DA7 1419 aa18.56■□□□□ 0.56
EXOSC1-204ENST00000370902 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
EXOSC1-204ENST00000370902 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
EXOSC1-204ENST00000370902 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
EXOSC1-204ENST00000370902 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
EXOSC1-204ENST00000370902 TROQ12816 1431 aaPredicted RBP18.51■□□□□ 0.55
EXOSC1-204ENST00000370902 PREX2Q70Z35 1606 aa18.51■□□□□ 0.55
EXOSC1-204ENST00000370902 C9orf84Q5VXU9 1444 aa18.5■□□□□ 0.55
EXOSC1-204ENST00000370902 ABCA6Q8N139 1617 aa18.5■□□□□ 0.55
EXOSC1-204ENST00000370902 FBXO41Q8TF61 875 aa18.5■□□□□ 0.55
EXOSC1-204ENST00000370902 ATP10AO60312 1499 aa18.49■□□□□ 0.55
EXOSC1-204ENST00000370902 REREQ9P2R6 1566 aa18.49■□□□□ 0.55
EXOSC1-204ENST00000370902 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
EXOSC1-204ENST00000370902 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
EXOSC1-204ENST00000370902 ABCC1P33527 1531 aa18.47■□□□□ 0.55
EXOSC1-204ENST00000370902 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
EXOSC1-204ENST00000370902 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
EXOSC1-204ENST00000370902 HSPA2P54652 639 aa18.45■□□□□ 0.54
EXOSC1-204ENST00000370902 CDC42BPAQ5VT25 1732 aa18.45■□□□□ 0.54
EXOSC1-204ENST00000370902 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
EXOSC1-204ENST00000370902 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
EXOSC1-204ENST00000370902 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
EXOSC1-204ENST00000370902 KIDINS220Q9ULH0 1771 aa18.41■□□□□ 0.54
EXOSC1-204ENST00000370902 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
EXOSC1-204ENST00000370902 C3P01024 1663 aa18.41■□□□□ 0.54
EXOSC1-204ENST00000370902 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
EXOSC1-204ENST00000370902 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
EXOSC1-204ENST00000370902 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
EXOSC1-204ENST00000370902 MLECQ14165 292 aa18.39■□□□□ 0.53
EXOSC1-204ENST00000370902 CLIP1P30622 1438 aa18.39■□□□□ 0.53
EXOSC1-204ENST00000370902 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
EXOSC1-204ENST00000370902 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
EXOSC1-204ENST00000370902 AGLP35573 1532 aa18.38■□□□□ 0.53
EXOSC1-204ENST00000370902 AFAP1Q8N556 730 aa18.37■□□□□ 0.53
EXOSC1-204ENST00000370902 SAMD9LQ8IVG5 1584 aa18.36■□□□□ 0.53
EXOSC1-204ENST00000370902 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
EXOSC1-204ENST00000370902 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
EXOSC1-204ENST00000370902 FYCO1Q9BQS8 1478 aa18.34■□□□□ 0.53
EXOSC1-204ENST00000370902 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
EXOSC1-204ENST00000370902 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
EXOSC1-204ENST00000370902 SYCP2Q9BX26 1530 aa18.29■□□□□ 0.52
EXOSC1-204ENST00000370902 SETD1BQ9UPS6 1966 aaKnown RBP18.29■□□□□ 0.52
EXOSC1-204ENST00000370902 INO80Q9ULG1 1556 aaPredicted RBP18.29■□□□□ 0.52
EXOSC1-204ENST00000370902 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
EXOSC1-204ENST00000370902 PLXNC1O60486 1568 aa18.28■□□□□ 0.52
EXOSC1-204ENST00000370902 UHRF1BP1Q6BDS2 1440 aa18.27■□□□□ 0.52
EXOSC1-204ENST00000370902 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.51
EXOSC1-204ENST00000370902 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
EXOSC1-204ENST00000370902 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
EXOSC1-204ENST00000370902 ATP7AQ04656 1500 aa18.22■□□□□ 0.51
EXOSC1-204ENST00000370902 LTBP4Q8N2S1 1624 aa18.21■□□□□ 0.51
EXOSC1-204ENST00000370902 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
EXOSC1-204ENST00000370902 TIAM1Q13009 1591 aa18.2■□□□□ 0.5
EXOSC1-204ENST00000370902 CLTCQ00610 1675 aaKnown RBP18.19■□□□□ 0.5
EXOSC1-204ENST00000370902 PTPRTO14522 1441 aa18.18■□□□□ 0.5
EXOSC1-204ENST00000370902 NCOA1Q15788 1441 aa18.18■□□□□ 0.5
EXOSC1-204ENST00000370902 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
EXOSC1-204ENST00000370902 MYO3AQ8NEV4 1616 aa18.18■□□□□ 0.5
EXOSC1-204ENST00000370902 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
EXOSC1-204ENST00000370902 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
EXOSC1-204ENST00000370902 NPATQ14207 1427 aa18.15■□□□□ 0.5
EXOSC1-204ENST00000370902 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
EXOSC1-204ENST00000370902 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
EXOSC1-204ENST00000370902 A2MP01023 1474 aa18.12■□□□□ 0.49
EXOSC1-204ENST00000370902 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
EXOSC1-204ENST00000370902 MBD5Q9P267 1494 aa18.12■□□□□ 0.49
EXOSC1-204ENST00000370902 EHBP1L1Q8N3D4 1523 aa18.12■□□□□ 0.49
EXOSC1-204ENST00000370902 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
EXOSC1-204ENST00000370902 CEP170BQ9Y4F5 1589 aaPredicted RBP18.09■□□□□ 0.49
EXOSC1-204ENST00000370902 PTPRKQ15262 1439 aa18.08■□□□□ 0.49
EXOSC1-204ENST00000370902 ZMYM3Q14202 1370 aa18.08■□□□□ 0.49
EXOSC1-204ENST00000370902 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.49
EXOSC1-204ENST00000370902 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
EXOSC1-204ENST00000370902 IQSEC2Q5JU85 1478 aa18.07■□□□□ 0.48
EXOSC1-204ENST00000370902 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
EXOSC1-204ENST00000370902 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
EXOSC1-204ENST00000370902 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
EXOSC1-204ENST00000370902 CEP162Q5TB80 1403 aa18.06■□□□□ 0.48
EXOSC1-204ENST00000370902 PLA2R1Q13018 1463 aa18.05■□□□□ 0.48
EXOSC1-204ENST00000370902 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
EXOSC1-204ENST00000370902 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
EXOSC1-204ENST00000370902 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
EXOSC1-204ENST00000370902 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
EXOSC1-204ENST00000370902 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
EXOSC1-204ENST00000370902 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
EXOSC1-204ENST00000370902 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
EXOSC1-204ENST00000370902 NEURL4Q96JN8 1562 aa18■□□□□ 0.47
EXOSC1-204ENST00000370902 POLR1AO95602 1720 aaPredicted RBP17.99■□□□□ 0.47
EXOSC1-204ENST00000370902 CAMSAP2Q08AD1 1489 aa17.99■□□□□ 0.47
EXOSC1-204ENST00000370902 NCOA2Q15596 1464 aa17.98■□□□□ 0.47
EXOSC1-204ENST00000370902 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
EXOSC1-204ENST00000370902 CCDC141Q6ZP82 1450 aa17.97■□□□□ 0.47
EXOSC1-204ENST00000370902 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
EXOSC1-204ENST00000370902 A2ML1A8K2U0 1454 aa17.96■□□□□ 0.47
EXOSC1-204ENST00000370902 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.47
EXOSC1-204ENST00000370902 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.46
EXOSC1-204ENST00000370902 ILDR2Q71H61 639 aa17.95■□□□□ 0.46
EXOSC1-204ENST00000370902 ZNF335Q9H4Z2 1342 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms