RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 DEKP35659 375 aaKnown RBP24.32■■□□□ 1.48
RTCA-203ENST00000370128 RAPGEF6Q8TEU7 1601 aa24.29■■□□□ 1.48
RTCA-203ENST00000370128 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
RTCA-203ENST00000370128 DAPK1P53355 1430 aa24.25■■□□□ 1.47
RTCA-203ENST00000370128 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
RTCA-203ENST00000370128 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
RTCA-203ENST00000370128 CCER2I3L3R5 266 aa24.23■■□□□ 1.47
RTCA-203ENST00000370128 ROCK1Q13464 1354 aa24.23■■□□□ 1.47
RTCA-203ENST00000370128 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
RTCA-203ENST00000370128 ANP32CO43423 234 aa24.22■■□□□ 1.47
RTCA-203ENST00000370128 DNMT1P26358 1616 aaKnown RBP24.22■■□□□ 1.47
RTCA-203ENST00000370128 ABCC5O15440 1437 aa24.21■■□□□ 1.47
RTCA-203ENST00000370128 SLC24A1O60721 1099 aa24.21■■□□□ 1.47
RTCA-203ENST00000370128 CDK11AQ9UQ88 783 aaPredicted RBP24.2■■□□□ 1.46
RTCA-203ENST00000370128 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
RTCA-203ENST00000370128 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
RTCA-203ENST00000370128 EIF5BO60841 1220 aaKnown RBP24.2■■□□□ 1.46
RTCA-203ENST00000370128 CCDC136Q96JN2 1154 aa24.2■■□□□ 1.46
RTCA-203ENST00000370128 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
RTCA-203ENST00000370128 FANCIQ9NVI1 1328 aa24.18■■□□□ 1.46
RTCA-203ENST00000370128 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
RTCA-203ENST00000370128 BCANQ96GW7 911 aa24.17■■□□□ 1.46
RTCA-203ENST00000370128 TROQ12816 1431 aaPredicted RBP24.15■■□□□ 1.46
RTCA-203ENST00000370128 PRG4Q92954 1404 aaPredicted RBP24.15■■□□□ 1.46
RTCA-203ENST00000370128 PLB1Q6P1J6 1458 aa24.14■■□□□ 1.45
RTCA-203ENST00000370128 FOXD1Q16676 465 aa24.14■■□□□ 1.45
RTCA-203ENST00000370128 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
RTCA-203ENST00000370128 L3MBTL2Q969R5 705 aa24.1■■□□□ 1.45
RTCA-203ENST00000370128 HSPA5P11021 654 aaKnown RBP24.1■■□□□ 1.45
RTCA-203ENST00000370128 NUP160Q12769 1436 aa24.09■■□□□ 1.45
RTCA-203ENST00000370128 FBLN2P98095 1184 aa24.08■■□□□ 1.45
RTCA-203ENST00000370128 CAMSAP2Q08AD1 1489 aa24.08■■□□□ 1.44
RTCA-203ENST00000370128 RPRD2Q5VT52 1461 aaKnown RBP24.07■■□□□ 1.44
RTCA-203ENST00000370128 WASHC2AQ641Q2 1341 aa24.07■■□□□ 1.44
RTCA-203ENST00000370128 GPATCH8Q9UKJ3 1502 aaKnown RBP24.06■■□□□ 1.44
RTCA-203ENST00000370128 CARMIL2Q6F5E8 1435 aa24.06■■□□□ 1.44
RTCA-203ENST00000370128 JPH4Q96JJ6 628 aa24.06■■□□□ 1.44
RTCA-203ENST00000370128 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
RTCA-203ENST00000370128 CFDP1Q9UEE9 299 aaPredicted RBP24.06■■□□□ 1.44
RTCA-203ENST00000370128 KIF14Q15058 1648 aa24.05■■□□□ 1.44
RTCA-203ENST00000370128 ADCY10Q96PN6 1610 aa24.05■■□□□ 1.44
RTCA-203ENST00000370128 EIF4G2P78344 907 aaKnown RBP eCLIP24.05■■□□□ 1.44
RTCA-203ENST00000370128 FKBP8Q14318 412 aa24.04■■□□□ 1.44
RTCA-203ENST00000370128 SLC4A1APQ9BWU0 796 aaKnown RBP24.02■■□□□ 1.44
RTCA-203ENST00000370128 TEX14Q8IWB6 1497 aa24.02■■□□□ 1.44
RTCA-203ENST00000370128 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
RTCA-203ENST00000370128 ADGBQ8N7X0 1667 aa23.98■■□□□ 1.43
RTCA-203ENST00000370128 PZPP20742 1482 aa23.98■■□□□ 1.43
RTCA-203ENST00000370128 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
RTCA-203ENST00000370128 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
RTCA-203ENST00000370128 ZNF777Q9ULD5 760 aaPredicted RBP23.96■■□□□ 1.43
RTCA-203ENST00000370128 CROCC2H7BZ55 1655 aa23.96■■□□□ 1.43
RTCA-203ENST00000370128 ABCA8O94911 1581 aa23.95■■□□□ 1.42
RTCA-203ENST00000370128 C11orf95C9JLR9 678 aaPredicted RBP23.91■■□□□ 1.42
RTCA-203ENST00000370128 CNTLNQ9NXG0 1405 aa23.91■■□□□ 1.42
RTCA-203ENST00000370128 PKNOX2Q96KN3 472 aa23.9■■□□□ 1.42
RTCA-203ENST00000370128 ATP10BO94823 1461 aa23.9■■□□□ 1.42
RTCA-203ENST00000370128 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
RTCA-203ENST00000370128 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.89■■□□□ 1.42
RTCA-203ENST00000370128 ABCC10Q5T3U5 1492 aa23.89■■□□□ 1.42
RTCA-203ENST00000370128 CDC42BPAQ5VT25 1732 aa23.89■■□□□ 1.41
RTCA-203ENST00000370128 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
RTCA-203ENST00000370128 ANKRD30AQ9BXX3 1397 aa23.89■■□□□ 1.41
RTCA-203ENST00000370128 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
RTCA-203ENST00000370128 KIAA1107Q9UPP5 1409 aa23.86■■□□□ 1.41
RTCA-203ENST00000370128 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
RTCA-203ENST00000370128 DAXXQ9UER7 740 aaPredicted RBP23.83■■□□□ 1.41
RTCA-203ENST00000370128 MBD5Q9P267 1494 aa23.82■■□□□ 1.4
RTCA-203ENST00000370128 SHANK2Q9UPX8 1470 aa23.82■■□□□ 1.4
RTCA-203ENST00000370128 NEFLP07196 543 aa23.81■■□□□ 1.4
RTCA-203ENST00000370128 PKD2Q13563 968 aa23.81■■□□□ 1.4
RTCA-203ENST00000370128 C9orf84Q5VXU9 1444 aa23.8■■□□□ 1.4
RTCA-203ENST00000370128 HNRNPUQ00839 825 aaKnown RBP eCLIP23.79■■□□□ 1.4
RTCA-203ENST00000370128 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
RTCA-203ENST00000370128 KIF7Q2M1P5 1343 aa23.78■■□□□ 1.4
RTCA-203ENST00000370128 IL27Q8NEV9 243 aa23.78■■□□□ 1.4
RTCA-203ENST00000370128 PRKRIP1Q9H875 184 aaPredicted RBP23.77■■□□□ 1.4
RTCA-203ENST00000370128 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
RTCA-203ENST00000370128 PTPRGP23470 1445 aa23.75■■□□□ 1.39
RTCA-203ENST00000370128 NUP155O75694 1391 aa23.73■■□□□ 1.39
RTCA-203ENST00000370128 TSPY4P0CV99 314 aa23.72■■□□□ 1.39
RTCA-203ENST00000370128 TSPY10P0CW01 314 aa23.72■■□□□ 1.39
RTCA-203ENST00000370128 ARHGEF5Q12774 1597 aa23.71■■□□□ 1.39
RTCA-203ENST00000370128 KDM5DQ9BY66 1539 aa23.7■■□□□ 1.39
RTCA-203ENST00000370128 HNRNPMP52272 730 aaKnown RBP eCLIP23.7■■□□□ 1.38
RTCA-203ENST00000370128 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
RTCA-203ENST00000370128 USP47Q96K76 1375 aa23.67■■□□□ 1.38
RTCA-203ENST00000370128 RTN4Q9NQC3 1192 aaKnown RBP23.67■■□□□ 1.38
RTCA-203ENST00000370128 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
RTCA-203ENST00000370128 UHRF1BP1Q6BDS2 1440 aa23.65■■□□□ 1.38
RTCA-203ENST00000370128 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
RTCA-203ENST00000370128 CDC42BPBQ9Y5S2 1711 aa23.65■■□□□ 1.38
RTCA-203ENST00000370128 BCORL1Q5H9F3 1711 aa23.64■■□□□ 1.38
RTCA-203ENST00000370128 PLEKHG5O94827 1062 aa23.64■■□□□ 1.38
RTCA-203ENST00000370128 PREX2Q70Z35 1606 aa23.64■■□□□ 1.38
RTCA-203ENST00000370128 KDM5CP41229 1560 aa23.64■■□□□ 1.37
RTCA-203ENST00000370128 MRS2Q9HD23 443 aa23.64■■□□□ 1.37
RTCA-203ENST00000370128 CHD1O14646 1710 aa23.63■■□□□ 1.37
RTCA-203ENST00000370128 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
RTCA-203ENST00000370128 NBR1Q14596 966 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms