RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 PES1O00541 588 aaKnown RBP10.87□□□□□ -0.67
VANGL1-204ENST00000369510 FTSJ3Q8IY81 847 aaKnown RBP10.87□□□□□ -0.67
VANGL1-204ENST00000369510 LMOD2Q6P5Q4 547 aa10.86□□□□□ -0.67
VANGL1-204ENST00000369510 RUFY1Q96T51 708 aa10.86□□□□□ -0.67
VANGL1-204ENST00000369510 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
VANGL1-204ENST00000369510 MNS1Q8NEH6 495 aa10.86□□□□□ -0.67
VANGL1-204ENST00000369510 IPO7O95373 1038 aaKnown RBP10.86□□□□□ -0.67
VANGL1-204ENST00000369510 CHMP3Q9Y3E7 222 aa10.86□□□□□ -0.67
VANGL1-204ENST00000369510 CHMP4AQ9BY43 222 aa10.85□□□□□ -0.67
VANGL1-204ENST00000369510 TONSLQ96HA7 1378 aa10.85□□□□□ -0.67
VANGL1-204ENST00000369510 NPHP1O15259 732 aa10.85□□□□□ -0.67
VANGL1-204ENST00000369510 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
VANGL1-204ENST00000369510 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
VANGL1-204ENST00000369510 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
VANGL1-204ENST00000369510 CFAP57Q96MR6 1250 aa10.83□□□□□ -0.68
VANGL1-204ENST00000369510 FYB1O15117 783 aa10.83□□□□□ -0.68
VANGL1-204ENST00000369510 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
VANGL1-204ENST00000369510 CFAP53Q96M91 514 aa10.83□□□□□ -0.68
VANGL1-204ENST00000369510 CCDC175P0C221 793 aa10.82□□□□□ -0.68
VANGL1-204ENST00000369510 PATL2C9JE40 543 aaKnown RBP10.82□□□□□ -0.68
VANGL1-204ENST00000369510 ERCC4Q92889 916 aaPredicted RBP10.82□□□□□ -0.68
VANGL1-204ENST00000369510 HSP90B2PQ58FF3 399 aa10.82□□□□□ -0.68
VANGL1-204ENST00000369510 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
VANGL1-204ENST00000369510 EZRP15311 586 aaKnown RBP10.81□□□□□ -0.68
VANGL1-204ENST00000369510 RTN4Q9NQC3 1192 aaKnown RBP10.81□□□□□ -0.68
VANGL1-204ENST00000369510 TAF7LQ5H9L4 462 aa10.81□□□□□ -0.68
VANGL1-204ENST00000369510 NF2P35240 595 aa10.81□□□□□ -0.68
VANGL1-204ENST00000369510 CCDC173Q0VFZ6 552 aa10.81□□□□□ -0.68
VANGL1-204ENST00000369510 TAF3Q5VWG9 929 aa10.81□□□□□ -0.68
VANGL1-204ENST00000369510 KIF16BQ96L93 1317 aa10.81□□□□□ -0.68
VANGL1-204ENST00000369510 H0YHG0 523 aa10.8□□□□□ -0.68
VANGL1-204ENST00000369510 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
VANGL1-204ENST00000369510 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
VANGL1-204ENST00000369510 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
VANGL1-204ENST00000369510 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
VANGL1-204ENST00000369510 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
VANGL1-204ENST00000369510 CCDC112Q8NEF3 446 aa10.79□□□□□ -0.68
VANGL1-204ENST00000369510 TMX4Q9H1E5 349 aaPredicted RBP10.79□□□□□ -0.68
VANGL1-204ENST00000369510 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
VANGL1-204ENST00000369510 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
VANGL1-204ENST00000369510 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
VANGL1-204ENST00000369510 NAP1L2Q9ULW6 460 aaPredicted RBP10.78□□□□□ -0.68
VANGL1-204ENST00000369510 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
VANGL1-204ENST00000369510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.68
VANGL1-204ENST00000369510 HDAC5Q9UQL6 1122 aa10.78□□□□□ -0.68
VANGL1-204ENST00000369510 PPM1EQ8WY54 764 aa10.77□□□□□ -0.68
VANGL1-204ENST00000369510 DEF6Q9H4E7 631 aa10.77□□□□□ -0.69
VANGL1-204ENST00000369510 TSPYL1Q9H0U9 437 aa10.76□□□□□ -0.69
VANGL1-204ENST00000369510 A0A0G2JS52 829 aa10.75□□□□□ -0.69
VANGL1-204ENST00000369510 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
VANGL1-204ENST00000369510 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
VANGL1-204ENST00000369510 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
VANGL1-204ENST00000369510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.74□□□□□ -0.69
VANGL1-204ENST00000369510 C14orf37Q86TY3 774 aa10.74□□□□□ -0.69
VANGL1-204ENST00000369510 CNKSR2Q8WXI2 1034 aa10.74□□□□□ -0.69
VANGL1-204ENST00000369510 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
VANGL1-204ENST00000369510 HOOK1Q9UJC3 728 aaKnown RBP10.73□□□□□ -0.69
VANGL1-204ENST00000369510 ATP6V1DQ9Y5K8 247 aa10.73□□□□□ -0.69
VANGL1-204ENST00000369510 SETSIPP0DME0 302 aa10.72□□□□□ -0.69
VANGL1-204ENST00000369510 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
VANGL1-204ENST00000369510 DHX8Q14562 1220 aaKnown RBP10.72□□□□□ -0.69
VANGL1-204ENST00000369510 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
VANGL1-204ENST00000369510 ODF2Q5BJF6 829 aa10.72□□□□□ -0.69
VANGL1-204ENST00000369510 KIF3BO15066 747 aa10.71□□□□□ -0.69
VANGL1-204ENST00000369510 CCDC47Q96A33 483 aaKnown RBP10.71□□□□□ -0.69
VANGL1-204ENST00000369510 GPATCH3Q96I76 525 aa10.71□□□□□ -0.7
VANGL1-204ENST00000369510 MRS2Q9HD23 443 aa10.71□□□□□ -0.7
VANGL1-204ENST00000369510 TPD52L1Q16890 204 aaPredicted RBP10.71□□□□□ -0.7
VANGL1-204ENST00000369510 RABEP1Q15276 862 aa10.7□□□□□ -0.7
VANGL1-204ENST00000369510 CCP110O43303 1012 aa10.7□□□□□ -0.7
VANGL1-204ENST00000369510 E9PSI1 815 aa10.7□□□□□ -0.7
VANGL1-204ENST00000369510 CLGNO14967 610 aa10.7□□□□□ -0.7
VANGL1-204ENST00000369510 ISY1Q9ULR0 285 aaKnown RBP10.7□□□□□ -0.7
VANGL1-204ENST00000369510 CLASRPQ8N2M8 674 aaKnown RBP10.7□□□□□ -0.7
VANGL1-204ENST00000369510 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.68□□□□□ -0.7
VANGL1-204ENST00000369510 V9GYY5 206 aaPredicted RBP10.68□□□□□ -0.7
VANGL1-204ENST00000369510 GOLGA6L19H0YKK7 550 aa10.68□□□□□ -0.7
VANGL1-204ENST00000369510 ERLIN2O94905 339 aa10.68□□□□□ -0.7
VANGL1-204ENST00000369510 KIAA0754O94854 1291 aa10.68□□□□□ -0.7
VANGL1-204ENST00000369510 LEKR1Q6ZMV7 388 aa10.68□□□□□ -0.7
VANGL1-204ENST00000369510 GOLGA6L10A6NI86 522 aa10.68□□□□□ -0.7
VANGL1-204ENST00000369510 SHTN1A0MZ66 631 aa10.68□□□□□ -0.7
VANGL1-204ENST00000369510 TXLNBQ8N3L3 684 aa10.67□□□□□ -0.7
VANGL1-204ENST00000369510 TCEAL9Q9UHQ7 104 aa10.67□□□□□ -0.7
VANGL1-204ENST00000369510 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 TCERG1O14776 1098 aaKnown RBP10.66□□□□□ -0.7
VANGL1-204ENST00000369510 STAMBPO95630 424 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 SKOR2Q2VWA4 1001 aaPredicted RBP10.66□□□□□ -0.7
VANGL1-204ENST00000369510 PDCL3Q9H2J4 239 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 GIMAP7Q8NHV1 300 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 GBP2P32456 591 aaPredicted RBP10.66□□□□□ -0.7
VANGL1-204ENST00000369510 RALBP1Q15311 655 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
VANGL1-204ENST00000369510 POLR3GO15318 223 aaPredicted RBP10.66□□□□□ -0.7
VANGL1-204ENST00000369510 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
VANGL1-204ENST00000369510 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.66□□□□□ -0.7
VANGL1-204ENST00000369510 ZBTB7CA1YPR0 619 aa10.65□□□□□ -0.7
VANGL1-204ENST00000369510 CT47A1Q5JQC4 288 aaPredicted RBP10.65□□□□□ -0.7
VANGL1-204ENST00000369510 MAPK8IP3Q9UPT6 1336 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms