RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 CAMSAP2Q08AD1 1489 aa34.28■■■■□ 3.08
PRDM13-202ENST00000369215 SCAF1Q9H7N4 1312 aaKnown RBP34.27■■■■□ 3.08
PRDM13-202ENST00000369215 ROCK1Q13464 1354 aa34.26■■■■□ 3.07
PRDM13-202ENST00000369215 ABCC10Q5T3U5 1492 aa34.25■■■■□ 3.07
PRDM13-202ENST00000369215 SIN3AQ96ST3 1273 aa34.23■■■■□ 3.07
PRDM13-202ENST00000369215 CDC42BPAQ5VT25 1732 aa34.22■■■■□ 3.07
PRDM13-202ENST00000369215 KDM6BO15054 1643 aa34.19■■■■□ 3.06
PRDM13-202ENST00000369215 NEUROD1Q13562 356 aa34.19■■■■□ 3.06
PRDM13-202ENST00000369215 TIMELESSQ9UNS1 1208 aa34.19■■■■□ 3.06
PRDM13-202ENST00000369215 ABCC2Q92887 1545 aa34.18■■■■□ 3.06
PRDM13-202ENST00000369215 ZNF777Q9ULD5 760 aaPredicted RBP34.13■■■■□ 3.05
PRDM13-202ENST00000369215 CROCC2H7BZ55 1655 aa34.12■■■■□ 3.05
PRDM13-202ENST00000369215 ADGBQ8N7X0 1667 aa34.1■■■■□ 3.05
PRDM13-202ENST00000369215 ACIN1Q9UKV3 1341 aaKnown RBP34.09■■■■□ 3.05
PRDM13-202ENST00000369215 TRIM52Q96A61 297 aa34.06■■■■□ 3.04
PRDM13-202ENST00000369215 ADGRL2O95490 1459 aa34.04■■■■□ 3.04
PRDM13-202ENST00000369215 UHRF1BP1LA0JNW5 1464 aa34.02■■■■□ 3.04
PRDM13-202ENST00000369215 PREX2Q70Z35 1606 aa34■■■■□ 3.03
PRDM13-202ENST00000369215 NCOA1Q15788 1441 aa34■■■■□ 3.03
PRDM13-202ENST00000369215 DENND4BO75064 1496 aaPredicted RBP34■■■■□ 3.03
PRDM13-202ENST00000369215 SHANK2Q9UPX8 1470 aa33.97■■■■□ 3.03
PRDM13-202ENST00000369215 TONSLQ96HA7 1378 aa33.97■■■■□ 3.03
PRDM13-202ENST00000369215 CDC42BPBQ9Y5S2 1711 aa33.96■■■■□ 3.03
PRDM13-202ENST00000369215 MPHOSPH9Q99550 1183 aa33.95■■■■□ 3.03
PRDM13-202ENST00000369215 ZCCHC11Q5TAX3 1644 aaKnown RBP33.95■■■■□ 3.02
PRDM13-202ENST00000369215 ANKRD30AQ9BXX3 1397 aa33.94■■■■□ 3.02
PRDM13-202ENST00000369215 PPP1R15AO75807 674 aaPredicted RBP33.93■■■■□ 3.02
PRDM13-202ENST00000369215 ARHGEF5Q12774 1597 aa33.93■■■■□ 3.02
PRDM13-202ENST00000369215 TTC37Q6PGP7 1564 aa33.93■■■■□ 3.02
PRDM13-202ENST00000369215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.92■■■■□ 3.02
PRDM13-202ENST00000369215 KDM5BQ9UGL1 1544 aa33.92■■■■□ 3.02
PRDM13-202ENST00000369215 SAMD9LQ8IVG5 1584 aa33.9■■■■□ 3.02
PRDM13-202ENST00000369215 CENPBP07199 599 aaPredicted RBP33.9■■■■□ 3.02
PRDM13-202ENST00000369215 C9orf84Q5VXU9 1444 aa33.89■■■■□ 3.01
PRDM13-202ENST00000369215 MBD5Q9P267 1494 aa33.85■■■■□ 3.01
PRDM13-202ENST00000369215 MYO5CQ9NQX4 1742 aa33.84■■■■□ 3.01
PRDM13-202ENST00000369215 ARHGAP5Q13017 1502 aa33.82■■■■□ 3
PRDM13-202ENST00000369215 TSPY4P0CV99 314 aa33.82■■■■□ 3
PRDM13-202ENST00000369215 TSPY10P0CW01 314 aa33.82■■■■□ 3
PRDM13-202ENST00000369215 HNRNPMP52272 730 aaKnown RBP eCLIP33.82■■■■□ 3
PRDM13-202ENST00000369215 CCDC141Q6ZP82 1450 aa33.8■■■■□ 3
PRDM13-202ENST00000369215 ANKRD50Q9ULJ7 1429 aa33.79■■■■□ 3
PRDM13-202ENST00000369215 RSPH4AQ5TD94 716 aa33.77■■■■□ 3
PRDM13-202ENST00000369215 MIER1Q8N108 512 aa33.77■■■■□ 3
PRDM13-202ENST00000369215 KCNH8Q96L42 1107 aa33.77■■■■□ 3
PRDM13-202ENST00000369215 PZPP20742 1482 aa33.76■■■■□ 3
PRDM13-202ENST00000369215 SLC4A1APQ9BWU0 796 aaKnown RBP33.76■■■□□ 2.99
PRDM13-202ENST00000369215 SYCP2Q9BX26 1530 aa33.73■■■□□ 2.99
PRDM13-202ENST00000369215 ANKRD30BQ9BXX2 1392 aa33.73■■■□□ 2.99
PRDM13-202ENST00000369215 FOXD1Q16676 465 aa33.73■■■□□ 2.99
PRDM13-202ENST00000369215 PLEKHH2Q8IVE3 1493 aa33.72■■■□□ 2.99
PRDM13-202ENST00000369215 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
PRDM13-202ENST00000369215 KIF15Q9NS87 1388 aa33.69■■■□□ 2.98
PRDM13-202ENST00000369215 PLCH2O75038 1416 aa33.69■■■□□ 2.98
PRDM13-202ENST00000369215 KIAA1107Q9UPP5 1409 aa33.68■■■□□ 2.98
PRDM13-202ENST00000369215 MAST1Q9Y2H9 1570 aa33.67■■■□□ 2.98
PRDM13-202ENST00000369215 RPRD2Q5VT52 1461 aaKnown RBP33.65■■■□□ 2.98
PRDM13-202ENST00000369215 WDR7Q9Y4E6 1490 aa33.6■■■□□ 2.97
PRDM13-202ENST00000369215 KDM5DQ9BY66 1539 aa33.6■■■□□ 2.97
PRDM13-202ENST00000369215 GTF3C3Q9Y5Q9 886 aa33.59■■■□□ 2.97
PRDM13-202ENST00000369215 EFCAB2Q5VUJ9 269 aa33.59■■■□□ 2.97
PRDM13-202ENST00000369215 ARAP3Q8WWN8 1544 aa33.56■■■□□ 2.96
PRDM13-202ENST00000369215 NUP155O75694 1391 aa33.56■■■□□ 2.96
PRDM13-202ENST00000369215 ARHGEF12Q9NZN5 1544 aa33.55■■■□□ 2.96
PRDM13-202ENST00000369215 PLXNC1O60486 1568 aa33.54■■■□□ 2.96
PRDM13-202ENST00000369215 ABCC1P33527 1531 aa33.54■■■□□ 2.96
PRDM13-202ENST00000369215 L3MBTL2Q969R5 705 aa33.53■■■□□ 2.96
PRDM13-202ENST00000369215 PKD2Q13563 968 aa33.53■■■□□ 2.96
PRDM13-202ENST00000369215 TEX14Q8IWB6 1497 aa33.51■■■□□ 2.96
PRDM13-202ENST00000369215 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
PRDM13-202ENST00000369215 ASXL2Q76L83 1435 aa33.44■■■□□ 2.94
PRDM13-202ENST00000369215 HIRIP3Q9BW71 556 aaPredicted RBP33.44■■■□□ 2.94
PRDM13-202ENST00000369215 YTHDC1Q96MU7 727 aaKnown RBP33.42■■■□□ 2.94
PRDM13-202ENST00000369215 DUOX2Q9NRD8 1548 aa33.41■■■□□ 2.94
PRDM13-202ENST00000369215 UNC13BO14795 1591 aa33.41■■■□□ 2.94
PRDM13-202ENST00000369215 TRAPPC8Q9Y2L5 1435 aa33.4■■■□□ 2.94
PRDM13-202ENST00000369215 FAM135AQ9P2D6 1515 aa33.38■■■□□ 2.93
PRDM13-202ENST00000369215 DDX10Q13206 875 aaKnown RBP33.36■■■□□ 2.93
PRDM13-202ENST00000369215 NPM1P06748 294 aaKnown RBP eCLIP33.34■■■□□ 2.93
PRDM13-202ENST00000369215 FANCAO15360 1455 aa33.34■■■□□ 2.93
PRDM13-202ENST00000369215 ERBINQ96RT1 1412 aa33.34■■■□□ 2.93
PRDM13-202ENST00000369215 MYT1Q01538 1121 aa33.32■■■□□ 2.92
PRDM13-202ENST00000369215 NBPF8Q3BBV2 869 aa33.3■■■□□ 2.92
PRDM13-202ENST00000369215 RTEL1-TNFRSF6BF6WH68 1400 aa33.3■■■□□ 2.92
PRDM13-202ENST00000369215 SPAG9O60271 1321 aaKnown RBP33.28■■■□□ 2.92
PRDM13-202ENST00000369215 IQGAP3Q86VI3 1631 aa33.27■■■□□ 2.92
PRDM13-202ENST00000369215 HSPA5P11021 654 aaKnown RBP33.27■■■□□ 2.92
PRDM13-202ENST00000369215 EIF4G2P78344 907 aaKnown RBP eCLIP33.27■■■□□ 2.92
PRDM13-202ENST00000369215 ZFYVE16Q7Z3T8 1539 aa33.26■■■□□ 2.92
PRDM13-202ENST00000369215 MAGI2Q86UL8 1455 aa33.25■■■□□ 2.91
PRDM13-202ENST00000369215 AFAP1Q8N556 730 aa33.23■■■□□ 2.91
PRDM13-202ENST00000369215 ADGRL1O94910 1474 aa33.22■■■□□ 2.91
PRDM13-202ENST00000369215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.21■■■□□ 2.91
PRDM13-202ENST00000369215 INO80Q9ULG1 1556 aaPredicted RBP33.19■■■□□ 2.9
PRDM13-202ENST00000369215 SCAPERQ9BY12 1400 aa33.17■■■□□ 2.9
PRDM13-202ENST00000369215 ATP7AQ04656 1500 aa33.16■■■□□ 2.9
PRDM13-202ENST00000369215 UHRF1BP1Q6BDS2 1440 aa33.12■■■□□ 2.89
PRDM13-202ENST00000369215 CCDC144AA2RUR9 1427 aa33.1■■■□□ 2.89
PRDM13-202ENST00000369215 CFAP74Q9C0B2 1584 aa33.09■■■□□ 2.89
PRDM13-202ENST00000369215 CD109Q6YHK3 1445 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms