RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
H3F3A-201ENST00000366813 TMEM92Q6UXU6 159 aa16.73■□□□□ 0.27
H3F3A-201ENST00000366813 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
H3F3A-201ENST00000366813 EMP3P54852 163 aa16.71■□□□□ 0.27
H3F3A-201ENST00000366813 HOXB3P14651 431 aaPredicted RBP16.7■□□□□ 0.26
H3F3A-201ENST00000366813 RIMBP2O15034 1052 aa16.7■□□□□ 0.26
H3F3A-201ENST00000366813 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
H3F3A-201ENST00000366813 PPP1R37O75864 691 aa16.62■□□□□ 0.25
H3F3A-201ENST00000366813 FAM205CA6NFA0 338 aa16.61■□□□□ 0.25
H3F3A-201ENST00000366813 HOXB1P14653 301 aaPredicted RBP16.59■□□□□ 0.25
H3F3A-201ENST00000366813 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
H3F3A-201ENST00000366813 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
H3F3A-201ENST00000366813 C2orf72A6NCS6 295 aa16.55■□□□□ 0.24
H3F3A-201ENST00000366813 HS3ST6Q96QI5 342 aa16.55■□□□□ 0.24
H3F3A-201ENST00000366813 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
H3F3A-201ENST00000366813 RYDENQ9NUL5 291 aaKnown RBP16.53■□□□□ 0.24
H3F3A-201ENST00000366813 ERBB3P21860 1342 aa16.52■□□□□ 0.23
H3F3A-201ENST00000366813 KIF3CO14782 793 aa16.49■□□□□ 0.23
H3F3A-201ENST00000366813 NKX1-1Q15270 411 aaPredicted RBP16.48■□□□□ 0.23
H3F3A-201ENST00000366813 POTEB3A0JP26 581 aa16.46■□□□□ 0.23
H3F3A-201ENST00000366813 POTEBQ6S5H4 581 aa16.46■□□□□ 0.23
H3F3A-201ENST00000366813 ARSIQ5FYB1 569 aa16.45■□□□□ 0.22
H3F3A-201ENST00000366813 GPR153Q6NV75 609 aa16.45■□□□□ 0.22
H3F3A-201ENST00000366813 RB1CC1Q8TDY2 1594 aa16.39■□□□□ 0.21
H3F3A-201ENST00000366813 VARS2Q5ST30 1063 aaKnown RBP16.39■□□□□ 0.21
H3F3A-201ENST00000366813 KHSRPQ92945 711 aaKnown RBP eCLIP16.36■□□□□ 0.212e-7■■□□□ 11.8
H3F3A-201ENST00000366813 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
H3F3A-201ENST00000366813 SLC34A2O95436 690 aa16.32■□□□□ 0.2
H3F3A-201ENST00000366813 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
H3F3A-201ENST00000366813 SPNS2Q8IVW8 549 aa16.3■□□□□ 0.2
H3F3A-201ENST00000366813 KRTAP3-3Q9BYR6 98 aa16.3■□□□□ 0.2
H3F3A-201ENST00000366813 KRTAP3-2Q9BYR7 98 aa16.3■□□□□ 0.2
H3F3A-201ENST00000366813 PCDHGA4Q9Y5G9 962 aa16.3■□□□□ 0.2
H3F3A-201ENST00000366813 FOXK1P85037 733 aa16.29■□□□□ 0.2
H3F3A-201ENST00000366813 PLPP6Q8IY26 295 aa16.29■□□□□ 0.2
H3F3A-201ENST00000366813 NUDT7P0C024 238 aa16.28■□□□□ 0.2
H3F3A-201ENST00000366813 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
H3F3A-201ENST00000366813 DSG2Q14126 1118 aa16.25■□□□□ 0.19
H3F3A-201ENST00000366813 ZNF687Q8N1G0 1237 aa16.25■□□□□ 0.19
H3F3A-201ENST00000366813 MMRN1Q13201 1228 aa16.21■□□□□ 0.19
H3F3A-201ENST00000366813 PDE4AP27815 886 aa16.2■□□□□ 0.18
H3F3A-201ENST00000366813 TBC1D12O60347 775 aa16.19■□□□□ 0.18
H3F3A-201ENST00000366813 PTCD2Q8WV60 388 aaKnown RBP16.18■□□□□ 0.18
H3F3A-201ENST00000366813 LHX6Q9UPM6 363 aa16.18■□□□□ 0.18
H3F3A-201ENST00000366813 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
H3F3A-201ENST00000366813 PPP1R15BQ5SWA1 713 aa16.13■□□□□ 0.17
H3F3A-201ENST00000366813 BBXQ8WY36 941 aaPredicted RBP16.13■□□□□ 0.17
H3F3A-201ENST00000366813 LARP6Q9BRS8 491 aaKnown RBP16.11■□□□□ 0.17
H3F3A-201ENST00000366813 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
H3F3A-201ENST00000366813 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
H3F3A-201ENST00000366813 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
H3F3A-201ENST00000366813 UPF1Q92900 1129 aaKnown RBP eCLIP16.08■□□□□ 0.16
H3F3A-201ENST00000366813 NACADO15069 1562 aa16.07■□□□□ 0.16
H3F3A-201ENST00000366813 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
H3F3A-201ENST00000366813 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
H3F3A-201ENST00000366813 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
H3F3A-201ENST00000366813 PBX2P40425 430 aa16.02■□□□□ 0.16
H3F3A-201ENST00000366813 OXER1Q8TDS5 423 aa16.02■□□□□ 0.16
H3F3A-201ENST00000366813 KDM4FA0A1W2PPD8 638 aa16.01■□□□□ 0.15
H3F3A-201ENST00000366813 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
H3F3A-201ENST00000366813 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
H3F3A-201ENST00000366813 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
H3F3A-201ENST00000366813 LSM11P83369 360 aaKnown RBP eCLIP15.98■□□□□ 0.15
H3F3A-201ENST00000366813 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
H3F3A-201ENST00000366813 PPP4R3BQ5MIZ7 849 aa15.96■□□□□ 0.15
H3F3A-201ENST00000366813 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
H3F3A-201ENST00000366813 MFSD10Q14728 455 aa15.94■□□□□ 0.14
H3F3A-201ENST00000366813 ARHGAP33O14559 1287 aa15.94■□□□□ 0.14
H3F3A-201ENST00000366813 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
H3F3A-201ENST00000366813 PTGER2P43116 358 aa15.93■□□□□ 0.14
H3F3A-201ENST00000366813 MAP3K9P80192 1104 aa15.93■□□□□ 0.14
H3F3A-201ENST00000366813 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
H3F3A-201ENST00000366813 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
H3F3A-201ENST00000366813 RNF166Q96A37 237 aaPredicted RBP15.91■□□□□ 0.14
H3F3A-201ENST00000366813 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
H3F3A-201ENST00000366813 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
H3F3A-201ENST00000366813 EVI5O60447 810 aa15.87■□□□□ 0.13
H3F3A-201ENST00000366813 ZNF454Q8N9F8 522 aa15.87■□□□□ 0.13
H3F3A-201ENST00000366813 PAXIP1Q6ZW49 1069 aaPredicted RBP15.86■□□□□ 0.13
H3F3A-201ENST00000366813 PSEN2P49810 448 aa15.84■□□□□ 0.13
H3F3A-201ENST00000366813 ANO8Q9HCE9 1232 aaPredicted RBP15.82■□□□□ 0.12
H3F3A-201ENST00000366813 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
H3F3A-201ENST00000366813 ADGRD1Q6QNK2 874 aa15.79■□□□□ 0.12
H3F3A-201ENST00000366813 KCNK17Q96T54 332 aa15.79■□□□□ 0.12
H3F3A-201ENST00000366813 DMRTA1Q5VZB9 504 aa15.78■□□□□ 0.12
H3F3A-201ENST00000366813 FOSBP53539 338 aa15.77■□□□□ 0.12
H3F3A-201ENST00000366813 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
H3F3A-201ENST00000366813 TK2O00142 265 aa15.75■□□□□ 0.11
H3F3A-201ENST00000366813 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
H3F3A-201ENST00000366813 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
H3F3A-201ENST00000366813 ZDHHC16Q969W1 377 aa15.72■□□□□ 0.11
H3F3A-201ENST00000366813 BCL2L12Q9HB09 334 aa15.72■□□□□ 0.11
H3F3A-201ENST00000366813 PTPREP23469 700 aa15.71■□□□□ 0.11
H3F3A-201ENST00000366813 CAMK2BQ13554 666 aa15.71■□□□□ 0.11
H3F3A-201ENST00000366813 WDR70Q9NW82 654 aa15.69■□□□□ 0.1
H3F3A-201ENST00000366813 DPYSL4O14531 572 aa15.68■□□□□ 0.1
H3F3A-201ENST00000366813 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
H3F3A-201ENST00000366813 ADAM33Q9BZ11 813 aa15.65■□□□□ 0.1
H3F3A-201ENST00000366813 HRO43593 1189 aa15.63■□□□□ 0.09
H3F3A-201ENST00000366813 VPS9D1Q9Y2B5 631 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms