RNA–Protein interactions for RNA: ENST00000362576.1

RNU6-543P-201, Transcript of RNA, U6 small nuclear 543, pseudogene, humanhuman

BASIC

Gene RNU6-543P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-543P-201ENST00000362576 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
RNU6-543P-201ENST00000362576 GOLGA2Q08379 1002 aa9.62□□□□□ -0.87
RNU6-543P-201ENST00000362576 LMOD2Q6P5Q4 547 aa9.62□□□□□ -0.87
RNU6-543P-201ENST00000362576 E2F4Q16254 413 aa9.61□□□□□ -0.87
RNU6-543P-201ENST00000362576 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
RNU6-543P-201ENST00000362576 FBXO22Q8NEZ5 403 aa9.59□□□□□ -0.87
RNU6-543P-201ENST00000362576 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
RNU6-543P-201ENST00000362576 PLCG2P16885 1265 aa9.56□□□□□ -0.88
RNU6-543P-201ENST00000362576 PDE4AP27815 886 aa9.55□□□□□ -0.88
RNU6-543P-201ENST00000362576 LARP6Q9BRS8 491 aaKnown RBP9.55□□□□□ -0.88
RNU6-543P-201ENST00000362576 SLAIN1Q8ND83 568 aa9.53□□□□□ -0.88
RNU6-543P-201ENST00000362576 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
RNU6-543P-201ENST00000362576 ST18O60284 1047 aa9.52□□□□□ -0.89
RNU6-543P-201ENST00000362576 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.89
RNU6-543P-201ENST00000362576 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
RNU6-543P-201ENST00000362576 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
RNU6-543P-201ENST00000362576 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
RNU6-543P-201ENST00000362576 SEMA3EO15041 775 aa9.49□□□□□ -0.89
RNU6-543P-201ENST00000362576 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
RNU6-543P-201ENST00000362576 CDAN1Q8IWY9 1227 aa9.48□□□□□ -0.89
RNU6-543P-201ENST00000362576 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
RNU6-543P-201ENST00000362576 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
RNU6-543P-201ENST00000362576 MS4A4AQ96JQ5 239 aa9.46□□□□□ -0.9
RNU6-543P-201ENST00000362576 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
RNU6-543P-201ENST00000362576 ILDR1Q86SU0 546 aaPredicted RBP9.45□□□□□ -0.9
RNU6-543P-201ENST00000362576 ZC3H15Q8WU90 426 aaKnown RBP9.45□□□□□ -0.9
RNU6-543P-201ENST00000362576 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
RNU6-543P-201ENST00000362576 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
RNU6-543P-201ENST00000362576 MFSD10Q14728 455 aa9.41□□□□□ -0.9
RNU6-543P-201ENST00000362576 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
RNU6-543P-201ENST00000362576 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
RNU6-543P-201ENST00000362576 NEUROD2Q15784 382 aa9.4□□□□□ -0.9
RNU6-543P-201ENST00000362576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.9
RNU6-543P-201ENST00000362576 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
RNU6-543P-201ENST00000362576 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
RNU6-543P-201ENST00000362576 SNPHO15079 494 aa9.36□□□□□ -0.91
RNU6-543P-201ENST00000362576 BRPF1P55201 1214 aaPredicted RBP9.36□□□□□ -0.91
RNU6-543P-201ENST00000362576 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
RNU6-543P-201ENST00000362576 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
RNU6-543P-201ENST00000362576 CAMK2BQ13554 666 aa9.33□□□□□ -0.92
RNU6-543P-201ENST00000362576 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
RNU6-543P-201ENST00000362576 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
RNU6-543P-201ENST00000362576 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
RNU6-543P-201ENST00000362576 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
RNU6-543P-201ENST00000362576 ZMYND10O75800 440 aa9.31□□□□□ -0.92
RNU6-543P-201ENST00000362576 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
RNU6-543P-201ENST00000362576 G3V3G9 751 aa9.3□□□□□ -0.92
RNU6-543P-201ENST00000362576 C3orf67Q6ZVT6 689 aa9.3□□□□□ -0.92
RNU6-543P-201ENST00000362576 GPIHBP1Q8IV16 184 aa9.29□□□□□ -0.92
RNU6-543P-201ENST00000362576 SPNS2Q8IVW8 549 aa9.29□□□□□ -0.92
RNU6-543P-201ENST00000362576 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
RNU6-543P-201ENST00000362576 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
RNU6-543P-201ENST00000362576 RBM26Q5T8P6 1007 aaKnown RBP9.28□□□□□ -0.92
RNU6-543P-201ENST00000362576 DPYSL4O14531 572 aa9.27□□□□□ -0.93
RNU6-543P-201ENST00000362576 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
RNU6-543P-201ENST00000362576 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
RNU6-543P-201ENST00000362576 SPDYE16A6NNV3 312 aaPredicted RBP9.26□□□□□ -0.93
RNU6-543P-201ENST00000362576 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
RNU6-543P-201ENST00000362576 POTEB3A0JP26 581 aa9.25□□□□□ -0.93
RNU6-543P-201ENST00000362576 DSG2Q14126 1118 aa9.25□□□□□ -0.93
RNU6-543P-201ENST00000362576 POTEBQ6S5H4 581 aa9.25□□□□□ -0.93
RNU6-543P-201ENST00000362576 AK7Q96M32 723 aa9.25□□□□□ -0.93
RNU6-543P-201ENST00000362576 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
RNU6-543P-201ENST00000362576 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
RNU6-543P-201ENST00000362576 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
RNU6-543P-201ENST00000362576 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
RNU6-543P-201ENST00000362576 EMP3P54852 163 aa9.21□□□□□ -0.94
RNU6-543P-201ENST00000362576 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
RNU6-543P-201ENST00000362576 MAP3K9P80192 1104 aa9.2□□□□□ -0.94
RNU6-543P-201ENST00000362576 FOXK1P85037 733 aa9.2□□□□□ -0.94
RNU6-543P-201ENST00000362576 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
RNU6-543P-201ENST00000362576 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
RNU6-543P-201ENST00000362576 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
RNU6-543P-201ENST00000362576 PDIA6Q15084 440 aa9.19□□□□□ -0.94
RNU6-543P-201ENST00000362576 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
RNU6-543P-201ENST00000362576 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
RNU6-543P-201ENST00000362576 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
RNU6-543P-201ENST00000362576 C2orf72A6NCS6 295 aa9.16□□□□□ -0.94
RNU6-543P-201ENST00000362576 GPBP1L1Q9HC44 474 aaPredicted RBP9.15□□□□□ -0.94
RNU6-543P-201ENST00000362576 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
RNU6-543P-201ENST00000362576 UPF1Q92900 1129 aaKnown RBP eCLIP9.14□□□□□ -0.95
RNU6-543P-201ENST00000362576 FAM205CA6NFA0 338 aa9.13□□□□□ -0.95
RNU6-543P-201ENST00000362576 HOXB1P14653 301 aaPredicted RBP9.13□□□□□ -0.95
RNU6-543P-201ENST00000362576 TRIM66O15016 1216 aa9.12□□□□□ -0.95
RNU6-543P-201ENST00000362576 PDE4DQ08499 809 aa9.11□□□□□ -0.95
RNU6-543P-201ENST00000362576 KDM4CQ9H3R0 1056 aa9.11□□□□□ -0.95
RNU6-543P-201ENST00000362576 TBC1D12O60347 775 aa9.1□□□□□ -0.95
RNU6-543P-201ENST00000362576 TMEM92Q6UXU6 159 aa9.1□□□□□ -0.95
RNU6-543P-201ENST00000362576 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
RNU6-543P-201ENST00000362576 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
RNU6-543P-201ENST00000362576 KIF3CO14782 793 aa9.07□□□□□ -0.96
RNU6-543P-201ENST00000362576 DOK7Q18PE1 504 aa9.07□□□□□ -0.96
RNU6-543P-201ENST00000362576 DDX12PQ92771 950 aa9.07□□□□□ -0.96
RNU6-543P-201ENST00000362576 ARXQ96QS3 562 aa9.07□□□□□ -0.96
RNU6-543P-201ENST00000362576 SUPT5HO00267 1087 aaKnown RBP9.04□□□□□ -0.96
RNU6-543P-201ENST00000362576 FCHSD2O94868 740 aa9.04□□□□□ -0.96
RNU6-543P-201ENST00000362576 GNPATO15228 680 aa9.03□□□□□ -0.96
RNU6-543P-201ENST00000362576 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
RNU6-543P-201ENST00000362576 IRF6O14896 467 aa9.02□□□□□ -0.97
RNU6-543P-201ENST00000362576 OSBPP22059 807 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms