RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 KIF14Q15058 1648 aa26.82■■□□□ 1.88
CMTM3-201ENST00000361909 CCER2I3L3R5 266 aa26.81■■□□□ 1.88
CMTM3-201ENST00000361909 RBM19Q9Y4C8 960 aaKnown RBP26.81■■□□□ 1.88
CMTM3-201ENST00000361909 ITSN2Q9NZM3 1697 aa26.8■■□□□ 1.88
CMTM3-201ENST00000361909 TIMELESSQ9UNS1 1208 aa26.8■■□□□ 1.88
CMTM3-201ENST00000361909 KDM5BQ9UGL1 1544 aa26.8■■□□□ 1.88
CMTM3-201ENST00000361909 RAB3GAP2Q9H2M9 1393 aa26.78■■□□□ 1.88
CMTM3-201ENST00000361909 ABCC10Q5T3U5 1492 aa26.77■■□□□ 1.88
CMTM3-201ENST00000361909 GPATCH8Q9UKJ3 1502 aaKnown RBP26.76■■□□□ 1.88
CMTM3-201ENST00000361909 SETD5Q9C0A6 1442 aa26.74■■□□□ 1.87
CMTM3-201ENST00000361909 ZCCHC11Q5TAX3 1644 aaKnown RBP26.74■■□□□ 1.87
CMTM3-201ENST00000361909 BCANQ96GW7 911 aa26.74■■□□□ 1.87
CMTM3-201ENST00000361909 KCNH8Q96L42 1107 aa26.74■■□□□ 1.87
CMTM3-201ENST00000361909 PTPRKQ15262 1439 aa26.7■■□□□ 1.86
CMTM3-201ENST00000361909 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.86
CMTM3-201ENST00000361909 CDC42BPAQ5VT25 1732 aa26.69■■□□□ 1.86
CMTM3-201ENST00000361909 PPP1R15AO75807 674 aaPredicted RBP26.68■■□□□ 1.86
CMTM3-201ENST00000361909 HFM1A2PYH4 1435 aa26.65■■□□□ 1.86
CMTM3-201ENST00000361909 FANCIQ9NVI1 1328 aa26.65■■□□□ 1.86
CMTM3-201ENST00000361909 DNMT1P26358 1616 aaKnown RBP26.63■■□□□ 1.85
CMTM3-201ENST00000361909 AKNAQ7Z591 1439 aa26.62■■□□□ 1.85
CMTM3-201ENST00000361909 CAMSAP2Q08AD1 1489 aa26.62■■□□□ 1.85
CMTM3-201ENST00000361909 MYT1LQ9UL68 1186 aa26.62■■□□□ 1.85
CMTM3-201ENST00000361909 DDX10Q13206 875 aaKnown RBP26.6■■□□□ 1.85
CMTM3-201ENST00000361909 DAPK1P53355 1430 aa26.6■■□□□ 1.85
CMTM3-201ENST00000361909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.853e-7■■■■■ 59
CMTM3-201ENST00000361909 ZNF644Q9H582 1327 aaPredicted RBP26.59■■□□□ 1.85
CMTM3-201ENST00000361909 PREX2Q70Z35 1606 aa26.58■■□□□ 1.85
CMTM3-201ENST00000361909 ANP32CO43423 234 aa26.58■■□□□ 1.85
CMTM3-201ENST00000361909 ABCC5O15440 1437 aa26.57■■□□□ 1.84
CMTM3-201ENST00000361909 NAIPQ13075 1403 aa26.56■■□□□ 1.84
CMTM3-201ENST00000361909 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
CMTM3-201ENST00000361909 CDC42BPBQ9Y5S2 1711 aa26.55■■□□□ 1.84
CMTM3-201ENST00000361909 TTC37Q6PGP7 1564 aa26.55■■□□□ 1.84
CMTM3-201ENST00000361909 WDR7Q9Y4E6 1490 aa26.52■■□□□ 1.84
CMTM3-201ENST00000361909 GCC2Q8IWJ2 1684 aa26.52■■□□□ 1.84
CMTM3-201ENST00000361909 MYO5CQ9NQX4 1742 aa26.52■■□□□ 1.84
CMTM3-201ENST00000361909 ZNF777Q9ULD5 760 aaPredicted RBP26.51■■□□□ 1.83
CMTM3-201ENST00000361909 ERICH6BQ5W0A0 696 aa26.49■■□□□ 1.83
CMTM3-201ENST00000361909 NPM1P06748 294 aaKnown RBP eCLIP26.48■■□□□ 1.83
CMTM3-201ENST00000361909 CROCC2H7BZ55 1655 aa26.48■■□□□ 1.83
CMTM3-201ENST00000361909 CHIC2Q9UKJ5 165 aa26.47■■□□□ 1.83
CMTM3-201ENST00000361909 PLCH2O75038 1416 aa26.46■■□□□ 1.83
CMTM3-201ENST00000361909 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
CMTM3-201ENST00000361909 RSPH4AQ5TD94 716 aa26.45■■□□□ 1.82
CMTM3-201ENST00000361909 SAMD9LQ8IVG5 1584 aa26.45■■□□□ 1.82
CMTM3-201ENST00000361909 MSH5O43196 834 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 ARHGAP5Q13017 1502 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 SHANK2Q9UPX8 1470 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 ASXL2Q76L83 1435 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 ARAP3Q8WWN8 1544 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 ADGRL2O95490 1459 aa26.44■■□□□ 1.82
CMTM3-201ENST00000361909 ADGBQ8N7X0 1667 aa26.43■■□□□ 1.82
CMTM3-201ENST00000361909 PLEKHH2Q8IVE3 1493 aa26.42■■□□□ 1.82
CMTM3-201ENST00000361909 MBD5Q9P267 1494 aa26.42■■□□□ 1.82
CMTM3-201ENST00000361909 ERICH6Q7L0X2 663 aa26.4■■□□□ 1.82
CMTM3-201ENST00000361909 KIAA1107Q9UPP5 1409 aa26.4■■□□□ 1.82
CMTM3-201ENST00000361909 TRIM52Q96A61 297 aa26.4■■□□□ 1.82
CMTM3-201ENST00000361909 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
CMTM3-201ENST00000361909 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
CMTM3-201ENST00000361909 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
CMTM3-201ENST00000361909 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.82
CMTM3-201ENST00000361909 NCOA1Q15788 1441 aa26.39■■□□□ 1.81
CMTM3-201ENST00000361909 EFCAB2Q5VUJ9 269 aa26.37■■□□□ 1.81
CMTM3-201ENST00000361909 ANKRD30AQ9BXX3 1397 aa26.36■■□□□ 1.81
CMTM3-201ENST00000361909 CCDC141Q6ZP82 1450 aa26.35■■□□□ 1.81
CMTM3-201ENST00000361909 TSPY4P0CV99 314 aa26.35■■□□□ 1.81
CMTM3-201ENST00000361909 TSPY10P0CW01 314 aa26.35■■□□□ 1.81
CMTM3-201ENST00000361909 SIN3AQ96ST3 1273 aa26.34■■□□□ 1.81
CMTM3-201ENST00000361909 HNRNPMP52272 730 aaKnown RBP eCLIP26.34■■□□□ 1.81
CMTM3-201ENST00000361909 C9orf84Q5VXU9 1444 aa26.34■■□□□ 1.81
CMTM3-201ENST00000361909 SYCP2Q9BX26 1530 aa26.31■■□□□ 1.8
CMTM3-201ENST00000361909 KDM6BO15054 1643 aa26.3■■□□□ 1.8
CMTM3-201ENST00000361909 MAST1Q9Y2H9 1570 aa26.29■■□□□ 1.8
CMTM3-201ENST00000361909 CYB5RLQ6IPT4 315 aa26.27■■□□□ 1.8
CMTM3-201ENST00000361909 TONSLQ96HA7 1378 aa26.27■■□□□ 1.8
CMTM3-201ENST00000361909 ABCC1P33527 1531 aa26.26■■□□□ 1.8
CMTM3-201ENST00000361909 ARHGEF12Q9NZN5 1544 aa26.23■■□□□ 1.79
CMTM3-201ENST00000361909 FANCAO15360 1455 aa26.21■■□□□ 1.79
CMTM3-201ENST00000361909 ANKRD50Q9ULJ7 1429 aa26.2■■□□□ 1.79
CMTM3-201ENST00000361909 PPP4R2Q9NY27 417 aa26.2■■□□□ 1.78
CMTM3-201ENST00000361909 KIF15Q9NS87 1388 aa26.17■■□□□ 1.78
CMTM3-201ENST00000361909 PLXNC1O60486 1568 aa26.17■■□□□ 1.78
CMTM3-201ENST00000361909 HNRNPUQ00839 825 aaKnown RBP eCLIP26.16■■□□□ 1.78
CMTM3-201ENST00000361909 CD109Q6YHK3 1445 aa26.15■■□□□ 1.78
CMTM3-201ENST00000361909 MPHOSPH9Q99550 1183 aa26.14■■□□□ 1.77
CMTM3-201ENST00000361909 CFAP74Q9C0B2 1584 aa26.13■■□□□ 1.77
CMTM3-201ENST00000361909 TRAPPC8Q9Y2L5 1435 aa26.13■■□□□ 1.77
CMTM3-201ENST00000361909 RTEL1-TNFRSF6BF6WH68 1400 aa26.12■■□□□ 1.77
CMTM3-201ENST00000361909 DENND4BO75064 1496 aaPredicted RBP26.12■■□□□ 1.77
CMTM3-201ENST00000361909 ADGRL1O94910 1474 aa26.1■■□□□ 1.77
CMTM3-201ENST00000361909 GLI2P10070 1586 aa26.1■■□□□ 1.77
CMTM3-201ENST00000361909 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
CMTM3-201ENST00000361909 DUOX2Q9NRD8 1548 aa26.06■■□□□ 1.76
CMTM3-201ENST00000361909 SCAPERQ9BY12 1400 aa26.06■■□□□ 1.76
CMTM3-201ENST00000361909 KDM5DQ9BY66 1539 aa26.05■■□□□ 1.76
CMTM3-201ENST00000361909 PZPP20742 1482 aa26.05■■□□□ 1.76
CMTM3-201ENST00000361909 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
CMTM3-201ENST00000361909 MAP3K4Q9Y6R4 1608 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms