RNA–Protein interactions for RNA: ENST00000360449.3

CPNE8-202, Transcript of copine 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CPNE8, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-202ENST00000360449 CCDC82Q8N4S0 544 aa6.64□□□□□ -1.35
CPNE8-202ENST00000360449 RBM42Q9BTD8 480 aaKnown RBP6.64□□□□□ -1.35
CPNE8-202ENST00000360449 CRISPLD2Q9H0B8 497 aa6.64□□□□□ -1.35
CPNE8-202ENST00000360449 PCDHB8Q9UN66 801 aa6.64□□□□□ -1.35
CPNE8-202ENST00000360449 PCDHB13Q9Y5F0 798 aa6.64□□□□□ -1.35
CPNE8-202ENST00000360449 TRAK2O60296 914 aa6.64□□□□□ -1.35
CPNE8-202ENST00000360449 MINK1Q8N4C8 1332 aaPredicted RBP6.64□□□□□ -1.35
CPNE8-202ENST00000360449 EFCAB3Q8N7B9 438 aa6.63□□□□□ -1.35
CPNE8-202ENST00000360449 SPDYE16A6NNV3 312 aaPredicted RBP6.62□□□□□ -1.35
CPNE8-202ENST00000360449 TRAIPQ9BWF2 469 aa6.62□□□□□ -1.35
CPNE8-202ENST00000360449 TSPYL2Q9H2G4 693 aaPredicted RBP6.62□□□□□ -1.35
CPNE8-202ENST00000360449 NECTIN2Q92692 538 aa6.62□□□□□ -1.35
CPNE8-202ENST00000360449 PHF8Q9UPP1 1060 aa6.62□□□□□ -1.35
CPNE8-202ENST00000360449 MLLT3P42568 568 aaPredicted RBP6.61□□□□□ -1.35
CPNE8-202ENST00000360449 AMHR2Q16671 573 aa6.61□□□□□ -1.35
CPNE8-202ENST00000360449 CABP2Q9NPB3 220 aa6.61□□□□□ -1.35
CPNE8-202ENST00000360449 PLEKHG3A1L390 1219 aa6.6□□□□□ -1.35
CPNE8-202ENST00000360449 ONECUT3O60422 494 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-202ENST00000360449 MAP2K5Q13163 448 aa6.59□□□□□ -1.35
CPNE8-202ENST00000360449 PCMTD1Q96MG8 357 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-202ENST00000360449 SERPINA10Q9UK55 444 aa6.59□□□□□ -1.35
CPNE8-202ENST00000360449 CCDC97Q96F63 343 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-202ENST00000360449 RAD21O60216 631 aa6.56□□□□□ -1.36
CPNE8-202ENST00000360449 PDIA6Q15084 440 aa6.56□□□□□ -1.36
CPNE8-202ENST00000360449 PARP9Q8IXQ6 854 aa6.56□□□□□ -1.36
CPNE8-202ENST00000360449 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
CPNE8-202ENST00000360449 IRF6O14896 467 aa6.55□□□□□ -1.36
CPNE8-202ENST00000360449 PDE4CQ08493 712 aa6.55□□□□□ -1.36
CPNE8-202ENST00000360449 PROSER2Q86WR7 435 aaPredicted RBP6.55□□□□□ -1.36
CPNE8-202ENST00000360449 CLUAP1Q96AJ1 413 aa6.55□□□□□ -1.36
CPNE8-202ENST00000360449 PPP1R15BQ5SWA1 713 aa6.54□□□□□ -1.36
CPNE8-202ENST00000360449 REM2Q8IYK8 340 aaPredicted RBP6.54□□□□□ -1.36
CPNE8-202ENST00000360449 CCDC61Q9Y6R9 512 aa6.54□□□□□ -1.36
CPNE8-202ENST00000360449 TMCO4Q5TGY1 634 aa6.54□□□□□ -1.36
CPNE8-202ENST00000360449 GPR37O15354 613 aa6.53□□□□□ -1.36
CPNE8-202ENST00000360449 PAK3O75914 559 aaPredicted RBP6.53□□□□□ -1.36
CPNE8-202ENST00000360449 TTLL12Q14166 644 aaPredicted RBP6.53□□□□□ -1.36
CPNE8-202ENST00000360449 MCM6Q14566 821 aa6.53□□□□□ -1.36
CPNE8-202ENST00000360449 PATL2C9JE40 543 aaKnown RBP6.52□□□□□ -1.37
CPNE8-202ENST00000360449 GOLGA2Q08379 1002 aa6.52□□□□□ -1.37
CPNE8-202ENST00000360449 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
CPNE8-202ENST00000360449 DPYSL4O14531 572 aa6.52□□□□□ -1.37
CPNE8-202ENST00000360449 IFNL1Q8IU54 200 aa6.52□□□□□ -1.37
CPNE8-202ENST00000360449 NUTM2FA1L443 756 aa6.51□□□□□ -1.37
CPNE8-202ENST00000360449 GNPATO15228 680 aa6.51□□□□□ -1.37
CPNE8-202ENST00000360449 HIC1Q14526 733 aa6.51□□□□□ -1.37
CPNE8-202ENST00000360449 GPHNQ9NQX3 736 aaPredicted RBP6.5□□□□□ -1.37
CPNE8-202ENST00000360449 PLSCR2Q9NRY7 297 aa6.5□□□□□ -1.37
CPNE8-202ENST00000360449 SH3D19Q5HYK7 790 aa6.49□□□□□ -1.37
CPNE8-202ENST00000360449 MS4A4AQ96JQ5 239 aa6.49□□□□□ -1.37
CPNE8-202ENST00000360449 ZNF777Q9ULD5 760 aaPredicted RBP6.49□□□□□ -1.37
CPNE8-202ENST00000360449 FCHSD2O94868 740 aa6.49□□□□□ -1.37
CPNE8-202ENST00000360449 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
CPNE8-202ENST00000360449 FARP1Q9Y4F1 1045 aaPredicted RBP6.49□□□□□ -1.37
CPNE8-202ENST00000360449 NISCHQ9Y2I1 1504 aa6.49□□□□□ -1.37
CPNE8-202ENST00000360449 PPP1R15AO75807 674 aaPredicted RBP6.46□□□□□ -1.37
CPNE8-202ENST00000360449 GIGYF2Q6Y7W6 1299 aaKnown RBP6.46□□□□□ -1.37
CPNE8-202ENST00000360449 FNBP4Q8N3X1 1017 aaPredicted RBP6.46□□□□□ -1.37
CPNE8-202ENST00000360449 PELP1Q8IZL8 1130 aaKnown RBP6.46□□□□□ -1.38
CPNE8-202ENST00000360449 EMILIN3Q9NT22 766 aa6.46□□□□□ -1.38
CPNE8-202ENST00000360449 MFAP1P55081 439 aaKnown RBP6.45□□□□□ -1.38
CPNE8-202ENST00000360449 WWC1Q8IX03 1113 aa6.45□□□□□ -1.38
CPNE8-202ENST00000360449 SHROOM4Q9ULL8 1493 aa6.45□□□□□ -1.38
CPNE8-202ENST00000360449 SPDYE5A6NIY4 337 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 PITPNM1O00562 1244 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 MAP3K13O43283 966 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 SKIV2LQ15477 1246 aaKnown RBP6.44□□□□□ -1.38
CPNE8-202ENST00000360449 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 FBXW7Q969H0 707 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 GZF1Q9H116 711 aaPredicted RBP6.44□□□□□ -1.38
CPNE8-202ENST00000360449 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 ACIN1Q9UKV3 1341 aaKnown RBP6.44□□□□□ -1.38
CPNE8-202ENST00000360449 GRXCR2A6NFK2 248 aa6.44□□□□□ -1.38
CPNE8-202ENST00000360449 KIF12Q96FN5 646 aa6.43□□□□□ -1.38
CPNE8-202ENST00000360449 ATP1B4Q9UN42 357 aaPredicted RBP6.43□□□□□ -1.38
CPNE8-202ENST00000360449 MS4A1P11836 297 aa6.42□□□□□ -1.38
CPNE8-202ENST00000360449 CLCN1P35523 988 aa6.42□□□□□ -1.38
CPNE8-202ENST00000360449 HMGB1P09429 215 aaKnown RBP6.41□□□□□ -1.38
CPNE8-202ENST00000360449 TMC2Q8TDI7 906 aa6.41□□□□□ -1.38
CPNE8-202ENST00000360449 E9PSI1 815 aa6.41□□□□□ -1.38
CPNE8-202ENST00000360449 RBM25P49756 843 aaKnown RBP6.41□□□□□ -1.38
CPNE8-202ENST00000360449 FOXK1P85037 733 aa6.41□□□□□ -1.38
CPNE8-202ENST00000360449 ZNF330Q9Y3S2 320 aaPredicted RBP6.41□□□□□ -1.38
CPNE8-202ENST00000360449 MAP3K9P80192 1104 aa6.4□□□□□ -1.38
CPNE8-202ENST00000360449 DSG2Q14126 1118 aa6.4□□□□□ -1.38
CPNE8-202ENST00000360449 CHADLQ6NUI6 762 aa6.4□□□□□ -1.38
CPNE8-202ENST00000360449 BANK1Q8NDB2 785 aa6.4□□□□□ -1.38
CPNE8-202ENST00000360449 OSBPP22059 807 aa6.39□□□□□ -1.39
CPNE8-202ENST00000360449 POM121Q96HA1 1249 aa6.39□□□□□ -1.39
CPNE8-202ENST00000360449 PRM3Q9NNZ6 103 aa6.39□□□□□ -1.39
CPNE8-202ENST00000360449 GPCPD1Q9NPB8 672 aa6.39□□□□□ -1.39
CPNE8-202ENST00000360449 COG6Q9Y2V7 657 aa6.39□□□□□ -1.39
CPNE8-202ENST00000360449 PTGER2P43116 358 aa6.38□□□□□ -1.39
CPNE8-202ENST00000360449 KCNA1Q09470 495 aa6.38□□□□□ -1.39
CPNE8-202ENST00000360449 OXER1Q8TDS5 423 aa6.37□□□□□ -1.39
CPNE8-202ENST00000360449 FECHP22830 423 aa6.36□□□□□ -1.39
CPNE8-202ENST00000360449 IRF5Q13568 498 aa6.36□□□□□ -1.39
CPNE8-202ENST00000360449 PTGDRQ13258 359 aa6.36□□□□□ -1.39
CPNE8-202ENST00000360449 TMEM259Q4ZIN3 620 aa6.36□□□□□ -1.39
CPNE8-202ENST00000360449 FOXD4L5Q5VV16 416 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms