RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 ROCK1Q13464 1354 aa30.76■■■□□ 2.51
FAM3A-202ENST00000359889 ABCC5O15440 1437 aa30.76■■■□□ 2.51
FAM3A-202ENST00000359889 ACIN1Q9UKV3 1341 aaKnown RBP30.75■■■□□ 2.51
FAM3A-202ENST00000359889 RRP7BPQ9NSQ0 103 aa30.74■■■□□ 2.51
FAM3A-202ENST00000359889 ZCCHC11Q5TAX3 1644 aaKnown RBP30.71■■■□□ 2.51
FAM3A-202ENST00000359889 CDC42BPAQ5VT25 1732 aa30.69■■■□□ 2.5
FAM3A-202ENST00000359889 KCNH8Q96L42 1107 aa30.65■■■□□ 2.5
FAM3A-202ENST00000359889 GCC2Q8IWJ2 1684 aa30.65■■■□□ 2.5
FAM3A-202ENST00000359889 MAPKBP1O60336 1514 aa30.63■■■□□ 2.49
FAM3A-202ENST00000359889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.61■■■□□ 2.49
FAM3A-202ENST00000359889 PREX2Q70Z35 1606 aa30.6■■■□□ 2.49
FAM3A-202ENST00000359889 RSPH4AQ5TD94 716 aa30.6■■■□□ 2.49
FAM3A-202ENST00000359889 NPM1P06748 294 aaKnown RBP eCLIP30.58■■■□□ 2.49
FAM3A-202ENST00000359889 TSPY4P0CV99 314 aa30.57■■■□□ 2.48
FAM3A-202ENST00000359889 TSPY10P0CW01 314 aa30.57■■■□□ 2.48
FAM3A-202ENST00000359889 ANKRD30AQ9BXX3 1397 aa30.57■■■□□ 2.48
FAM3A-202ENST00000359889 ARHGAP5Q13017 1502 aa30.56■■■□□ 2.48
FAM3A-202ENST00000359889 TTC37Q6PGP7 1564 aa30.56■■■□□ 2.48
FAM3A-202ENST00000359889 ADGRL2O95490 1459 aa30.55■■■□□ 2.48
FAM3A-202ENST00000359889 SHANK2Q9UPX8 1470 aa30.55■■■□□ 2.48
FAM3A-202ENST00000359889 TRIM52Q96A61 297 aa30.54■■■□□ 2.48
FAM3A-202ENST00000359889 PLEKHH2Q8IVE3 1493 aa30.53■■■□□ 2.48
FAM3A-202ENST00000359889 WDR7Q9Y4E6 1490 aa30.53■■■□□ 2.48
FAM3A-202ENST00000359889 NCOA1Q15788 1441 aa30.53■■■□□ 2.48
FAM3A-202ENST00000359889 ARHGEF5Q12774 1597 aa30.52■■■□□ 2.48
FAM3A-202ENST00000359889 PLCH2O75038 1416 aa30.51■■■□□ 2.47
FAM3A-202ENST00000359889 HNRNPMP52272 730 aaKnown RBP eCLIP30.5■■■□□ 2.47
FAM3A-202ENST00000359889 CROCC2H7BZ55 1655 aa30.5■■■□□ 2.47
FAM3A-202ENST00000359889 CDC42BPBQ9Y5S2 1711 aa30.5■■■□□ 2.47
FAM3A-202ENST00000359889 ADGBQ8N7X0 1667 aa30.49■■■□□ 2.47
FAM3A-202ENST00000359889 MYO5CQ9NQX4 1742 aa30.49■■■□□ 2.47
FAM3A-202ENST00000359889 EFCAB2Q5VUJ9 269 aa30.49■■■□□ 2.47
FAM3A-202ENST00000359889 TIMELESSQ9UNS1 1208 aa30.49■■■□□ 2.47
FAM3A-202ENST00000359889 C9orf84Q5VXU9 1444 aa30.49■■■□□ 2.47
FAM3A-202ENST00000359889 SAMD9LQ8IVG5 1584 aa30.48■■■□□ 2.47
FAM3A-202ENST00000359889 CCDC141Q6ZP82 1450 aa30.47■■■□□ 2.47
FAM3A-202ENST00000359889 MBD5Q9P267 1494 aa30.47■■■□□ 2.47
FAM3A-202ENST00000359889 KIAA1107Q9UPP5 1409 aa30.46■■■□□ 2.47
FAM3A-202ENST00000359889 ASXL2Q76L83 1435 aa30.42■■■□□ 2.46
FAM3A-202ENST00000359889 NEUROD1Q13562 356 aa30.42■■■□□ 2.46
FAM3A-202ENST00000359889 KDM6BO15054 1643 aa30.41■■■□□ 2.46
FAM3A-202ENST00000359889 ZNF316A6NFI3 1004 aaPredicted RBP30.4■■■□□ 2.46
FAM3A-202ENST00000359889 ARAP3Q8WWN8 1544 aa30.4■■■□□ 2.46
FAM3A-202ENST00000359889 SIN3AQ96ST3 1273 aa30.39■■■□□ 2.46
FAM3A-202ENST00000359889 MPHOSPH9Q99550 1183 aa30.39■■■□□ 2.45
FAM3A-202ENST00000359889 SYCP2Q9BX26 1530 aa30.37■■■□□ 2.45
FAM3A-202ENST00000359889 ANKRD50Q9ULJ7 1429 aa30.37■■■□□ 2.45
FAM3A-202ENST00000359889 KIF15Q9NS87 1388 aa30.33■■■□□ 2.45
FAM3A-202ENST00000359889 ABCA9Q8IUA7 1624 aa30.3■■■□□ 2.44
FAM3A-202ENST00000359889 MAST1Q9Y2H9 1570 aa30.29■■■□□ 2.44
FAM3A-202ENST00000359889 SLC4A1APQ9BWU0 796 aaKnown RBP30.29■■■□□ 2.44
FAM3A-202ENST00000359889 TONSLQ96HA7 1378 aa30.27■■■□□ 2.44
FAM3A-202ENST00000359889 ABCC1P33527 1531 aa30.26■■■□□ 2.43
FAM3A-202ENST00000359889 FANCAO15360 1455 aa30.22■■■□□ 2.43
FAM3A-202ENST00000359889 ARHGEF12Q9NZN5 1544 aa30.22■■■□□ 2.43
FAM3A-202ENST00000359889 DENND4BO75064 1496 aaPredicted RBP30.21■■■□□ 2.43
FAM3A-202ENST00000359889 CYB5RLQ6IPT4 315 aa30.19■■■□□ 2.42
FAM3A-202ENST00000359889 PZPP20742 1482 aa30.17■■■□□ 2.42
FAM3A-202ENST00000359889 PLXNC1O60486 1568 aa30.16■■■□□ 2.42
FAM3A-202ENST00000359889 NUP155O75694 1391 aa30.16■■■□□ 2.42
FAM3A-202ENST00000359889 PPP1R15AO75807 674 aaPredicted RBP30.16■■■□□ 2.42
FAM3A-202ENST00000359889 TRAPPC8Q9Y2L5 1435 aa30.15■■■□□ 2.42
FAM3A-202ENST00000359889 SPAG9O60271 1321 aaKnown RBP30.14■■■□□ 2.42
FAM3A-202ENST00000359889 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.42
FAM3A-202ENST00000359889 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.42
FAM3A-202ENST00000359889 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.42
FAM3A-202ENST00000359889 DIEXFQ68CQ4 756 aaKnown RBP30.13■■■□□ 2.41
FAM3A-202ENST00000359889 RTEL1-TNFRSF6BF6WH68 1400 aa30.13■■■□□ 2.41
FAM3A-202ENST00000359889 ANKRD30BQ9BXX2 1392 aa30.13■■■□□ 2.41
FAM3A-202ENST00000359889 CD109Q6YHK3 1445 aa30.12■■■□□ 2.41
FAM3A-202ENST00000359889 DUOX2Q9NRD8 1548 aa30.11■■■□□ 2.41
FAM3A-202ENST00000359889 ADGRL1O94910 1474 aa30.11■■■□□ 2.41
FAM3A-202ENST00000359889 FOXD1Q16676 465 aa30.1■■■□□ 2.41
FAM3A-202ENST00000359889 KDM5DQ9BY66 1539 aa30.1■■■□□ 2.41
FAM3A-202ENST00000359889 SCAPERQ9BY12 1400 aa30.08■■■□□ 2.41
FAM3A-202ENST00000359889 PKD2Q13563 968 aa30.08■■■□□ 2.41
FAM3A-202ENST00000359889 AFAP1Q8N556 730 aa30.07■■■□□ 2.4
FAM3A-202ENST00000359889 ERBINQ96RT1 1412 aa30.06■■■□□ 2.4
FAM3A-202ENST00000359889 CFAP74Q9C0B2 1584 aa30.04■■■□□ 2.4
FAM3A-202ENST00000359889 RPRD2Q5VT52 1461 aaKnown RBP30.02■■■□□ 2.4
FAM3A-202ENST00000359889 MYT1LQ9UL68 1186 aa29.99■■■□□ 2.39
FAM3A-202ENST00000359889 ZFYVE16Q7Z3T8 1539 aa29.98■■■□□ 2.39
FAM3A-202ENST00000359889 UNC13BO14795 1591 aa29.95■■■□□ 2.39
FAM3A-202ENST00000359889 ZNF518AQ6AHZ1 1483 aa29.95■■■□□ 2.38
FAM3A-202ENST00000359889 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
FAM3A-202ENST00000359889 FAM135AQ9P2D6 1515 aa29.94■■■□□ 2.38
FAM3A-202ENST00000359889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.93■■■□□ 2.38
FAM3A-202ENST00000359889 NEO1Q92859 1461 aa29.93■■■□□ 2.38
FAM3A-202ENST00000359889 INO80Q9ULG1 1556 aaPredicted RBP29.91■■■□□ 2.38
FAM3A-202ENST00000359889 L3MBTL2Q969R5 705 aa29.91■■■□□ 2.38
FAM3A-202ENST00000359889 GLI2P10070 1586 aa29.89■■■□□ 2.38
FAM3A-202ENST00000359889 POGZQ7Z3K3 1410 aa29.87■■■□□ 2.37
FAM3A-202ENST00000359889 MAGI2Q86UL8 1455 aa29.86■■■□□ 2.37
FAM3A-202ENST00000359889 IQGAP3Q86VI3 1631 aa29.84■■■□□ 2.37
FAM3A-202ENST00000359889 DHX29Q7Z478 1369 aaKnown RBP29.83■■■□□ 2.37
FAM3A-202ENST00000359889 TEX14Q8IWB6 1497 aa29.81■■■□□ 2.36
FAM3A-202ENST00000359889 MAP3K4Q9Y6R4 1608 aa29.8■■■□□ 2.36
FAM3A-202ENST00000359889 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
FAM3A-202ENST00000359889 KANK1Q14678 1352 aa29.79■■■□□ 2.36
FAM3A-202ENST00000359889 MLH3Q9UHC1 1453 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms