RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MSH5O43196 834 aa7.66□□□□□ -1.18
VPS13B-203ENST00000358544 CHMP4BQ9H444 224 aaKnown RBP7.66□□□□□ -1.18
VPS13B-203ENST00000358544 SKOR2Q2VWA4 1001 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-203ENST00000358544 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
VPS13B-203ENST00000358544 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
VPS13B-203ENST00000358544 CARD11Q9BXL7 1154 aa7.64□□□□□ -1.19
VPS13B-203ENST00000358544 GOLGA6L4A6NEF3 574 aa7.64□□□□□ -1.19
VPS13B-203ENST00000358544 RALBP1Q15311 655 aa7.64□□□□□ -1.19
VPS13B-203ENST00000358544 EXOC6Q8TAG9 804 aa7.64□□□□□ -1.19
VPS13B-203ENST00000358544 CFAP53Q96M91 514 aa7.64□□□□□ -1.19
VPS13B-203ENST00000358544 RSF1Q96T23 1441 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-203ENST00000358544 MRE11P49959 708 aa7.63□□□□□ -1.19
VPS13B-203ENST00000358544 RRP1P56182 461 aaKnown RBP7.63□□□□□ -1.19
VPS13B-203ENST00000358544 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-203ENST00000358544 CDCA8Q53HL2 280 aa7.63□□□□□ -1.19
VPS13B-203ENST00000358544 CC2D1BQ5T0F9 858 aaKnown RBP7.63□□□□□ -1.19
VPS13B-203ENST00000358544 PHF14O94880 888 aa7.63□□□□□ -1.19
VPS13B-203ENST00000358544 KTN1Q86UP2 1357 aaKnown RBP7.63□□□□□ -1.19
VPS13B-203ENST00000358544 VPS8Q8N3P4 1428 aa7.63□□□□□ -1.19
VPS13B-203ENST00000358544 PPP1R15AO75807 674 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-203ENST00000358544 CALD1Q05682 793 aaKnown RBP7.61□□□□□ -1.19
VPS13B-203ENST00000358544 CENPQQ7L2Z9 268 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-203ENST00000358544 DHX57Q6P158 1386 aaKnown RBP7.61□□□□□ -1.19
VPS13B-203ENST00000358544 MCCP23508 829 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 ZMYND15Q9H091 742 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 RAB3GAP2Q9H2M9 1393 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 MAPK8IP3Q9UPT6 1336 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 TEX35Q5T0J7 233 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 CCDC39Q9UFE4 941 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 FOXD4L1Q9NU39 408 aa7.6□□□□□ -1.19
VPS13B-203ENST00000358544 GOLGA6L1Q8N7Z2 621 aa7.59□□□□□ -1.19
VPS13B-203ENST00000358544 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS13B-203ENST00000358544 TAF3Q5VWG9 929 aa7.59□□□□□ -1.19
VPS13B-203ENST00000358544 FRAT2O75474 233 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-203ENST00000358544 WRNQ14191 1432 aaPredicted RBP eCLIP7.59□□□□□ -1.19
VPS13B-203ENST00000358544 CFAP44Q96MT7 982 aa7.59□□□□□ -1.19
VPS13B-203ENST00000358544 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-203ENST00000358544 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
VPS13B-203ENST00000358544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.58□□□□□ -1.22e-6■■□□□ 14.1
VPS13B-203ENST00000358544 R3HCC1Q9Y3T6 440 aaKnown RBP7.58□□□□□ -1.2
VPS13B-203ENST00000358544 RBM10P98175 930 aaKnown RBP7.57□□□□□ -1.2
VPS13B-203ENST00000358544 CCDC66A2RUB6 948 aa7.57□□□□□ -1.2
VPS13B-203ENST00000358544 PDE4CQ08493 712 aa7.57□□□□□ -1.2
VPS13B-203ENST00000358544 CHMP5Q9NZZ3 219 aa7.57□□□□□ -1.2
VPS13B-203ENST00000358544 KIAA1211Q6ZU35 1233 aa7.57□□□□□ -1.2
VPS13B-203ENST00000358544 KIF16BQ96L93 1317 aa7.57□□□□□ -1.2
VPS13B-203ENST00000358544 NASPP49321 788 aaPredicted RBP7.56□□□□□ -1.2
VPS13B-203ENST00000358544 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
VPS13B-203ENST00000358544 PMFBP1Q8TBY8 1022 aa7.56□□□□□ -1.2
VPS13B-203ENST00000358544 APPP05067 770 aa7.56□□□□□ -1.2
VPS13B-203ENST00000358544 GPS2Q13227 327 aa7.56□□□□□ -1.2
VPS13B-203ENST00000358544 HMGN5P82970 282 aaKnown RBP7.56□□□□□ -1.2
VPS13B-203ENST00000358544 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
VPS13B-203ENST00000358544 ROCK2O75116 1388 aaKnown RBP7.55□□□□□ -1.2
VPS13B-203ENST00000358544 SCRIBQ14160 1630 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 NLRP13Q86W25 1043 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 ITPRIPQ8IWB1 547 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 PHLDB1Q86UU1 1377 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 ESPNB1AK53 854 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 CCDC173Q0VFZ6 552 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 CRBNQ96SW2 442 aa7.55□□□□□ -1.2
VPS13B-203ENST00000358544 UQCRHLA0A096LP55 91 aa7.54□□□□□ -1.2
VPS13B-203ENST00000358544 UQCRHP07919 91 aa7.54□□□□□ -1.2
VPS13B-203ENST00000358544 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-203ENST00000358544 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
VPS13B-203ENST00000358544 IPO8O15397 1037 aaKnown RBP7.54□□□□□ -1.2
VPS13B-203ENST00000358544 PLIN1O60240 522 aa7.54□□□□□ -1.2
VPS13B-203ENST00000358544 CHGAP10645 457 aaKnown RBP7.54□□□□□ -1.2
VPS13B-203ENST00000358544 BAZ1BQ9UIG0 1483 aaKnown RBP7.54□□□□□ -1.2
VPS13B-203ENST00000358544 CALRP27797 417 aaKnown RBP7.54□□□□□ -1.2
VPS13B-203ENST00000358544 ISY1Q9ULR0 285 aaKnown RBP7.53□□□□□ -1.2
VPS13B-203ENST00000358544 FGD1P98174 961 aa7.53□□□□□ -1.2
VPS13B-203ENST00000358544 PDE4DIPQ5VU43 2346 aa7.53□□□□□ -1.2
VPS13B-203ENST00000358544 SOGA1O94964 1423 aa7.53□□□□□ -1.2
VPS13B-203ENST00000358544 ST18O60284 1047 aa7.53□□□□□ -1.2
VPS13B-203ENST00000358544 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
VPS13B-203ENST00000358544 KCNJ4P48050 445 aa7.53□□□□□ -1.2
VPS13B-203ENST00000358544 CENPJQ9HC77 1338 aaPredicted RBP7.53□□□□□ -1.2
VPS13B-203ENST00000358544 KIF15Q9NS87 1388 aa7.52□□□□□ -1.2
VPS13B-203ENST00000358544 HTATSF1O43719 755 aaKnown RBP7.52□□□□□ -1.2
VPS13B-203ENST00000358544 CWC15Q9P013 229 aaKnown RBP7.52□□□□□ -1.21
VPS13B-203ENST00000358544 BAZ2BQ9UIF8 2168 aaKnown RBP7.52□□□□□ -1.21
VPS13B-203ENST00000358544 PRKRIP1Q9H875 184 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-203ENST00000358544 RGL3Q3MIN7 710 aa7.52□□□□□ -1.21
VPS13B-203ENST00000358544 TMF1P82094 1093 aa7.51□□□□□ -1.21
VPS13B-203ENST00000358544 POGKQ9P215 609 aa7.51□□□□□ -1.21
VPS13B-203ENST00000358544 CGNL1Q0VF96 1302 aa7.51□□□□□ -1.21
VPS13B-203ENST00000358544 TSPY4P0CV99 314 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 TSPY10P0CW01 314 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 BACH2Q9BYV9 841 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 DIAPH3Q9NSV4 1193 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 MAPK8IP2Q13387 824 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-203ENST00000358544 C11orf95C9JLR9 678 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-203ENST00000358544 NOC3LQ8WTT2 800 aaKnown RBP7.5□□□□□ -1.21
VPS13B-203ENST00000358544 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 TPM4P67936 248 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 GRPEL1Q9HAV7 217 aa7.5□□□□□ -1.21
VPS13B-203ENST00000358544 MYBBP1AQ9BQG0 1328 aaKnown RBP7.49□□□□□ -1.21
VPS13B-203ENST00000358544 OS9Q13438 667 aaPredicted RBP7.49□□□□□ -1.21
VPS13B-203ENST00000358544 URB1O60287 2271 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms