RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
NPAS3-203ENST00000357798 NESP48681 1621 aa32.44■■■□□ 2.78
NPAS3-203ENST00000357798 RPRD2Q5VT52 1461 aaKnown RBP32.44■■■□□ 2.78
NPAS3-203ENST00000357798 TEX14Q8IWB6 1497 aa32.42■■■□□ 2.78
NPAS3-203ENST00000357798 B4GALNT3Q6L9W6 998 aa32.41■■■□□ 2.78
NPAS3-203ENST00000357798 SPATA31E1Q6ZUB1 1445 aa32.39■■■□□ 2.78
NPAS3-203ENST00000357798 TDRD9Q8NDG6 1382 aaKnown RBP32.39■■■□□ 2.78
NPAS3-203ENST00000357798 ANKRD30BQ9BXX2 1392 aa32.38■■■□□ 2.77
NPAS3-203ENST00000357798 EPRSP07814 1512 aaKnown RBP32.38■■■□□ 2.77
NPAS3-203ENST00000357798 ROCK1Q13464 1354 aa32.35■■■□□ 2.77
NPAS3-203ENST00000357798 KIF7Q2M1P5 1343 aa32.34■■■□□ 2.77
NPAS3-203ENST00000357798 SMG6Q86US8 1419 aaKnown RBP32.34■■■□□ 2.77
NPAS3-203ENST00000357798 NBPF8Q3BBV2 869 aa32.32■■■□□ 2.76
NPAS3-203ENST00000357798 WDR62O43379 1518 aa32.28■■■□□ 2.76
NPAS3-203ENST00000357798 DNMT1P26358 1616 aaKnown RBP32.27■■■□□ 2.76
NPAS3-203ENST00000357798 FOXD1Q16676 465 aa32.26■■■□□ 2.75
NPAS3-203ENST00000357798 DAPK1P53355 1430 aa32.25■■■□□ 2.75
NPAS3-203ENST00000357798 CDK13Q14004 1512 aaKnown RBP32.25■■■□□ 2.75
NPAS3-203ENST00000357798 IQGAP2Q13576 1575 aa32.24■■■□□ 2.75
NPAS3-203ENST00000357798 NOP58Q9Y2X3 529 aaKnown RBP32.24■■■□□ 2.75
NPAS3-203ENST00000357798 RNF123Q5XPI4 1314 aa32.22■■■□□ 2.75
NPAS3-203ENST00000357798 DHX29Q7Z478 1369 aaKnown RBP32.19■■■□□ 2.74
NPAS3-203ENST00000357798 DEKP35659 375 aaKnown RBP32.18■■■□□ 2.74
NPAS3-203ENST00000357798 NUDCQ9Y266 331 aa32.18■■■□□ 2.74
NPAS3-203ENST00000357798 TARBP1Q13395 1621 aaKnown RBP32.17■■■□□ 2.74
NPAS3-203ENST00000357798 ABCC5O15440 1437 aa32.16■■■□□ 2.74
NPAS3-203ENST00000357798 PBRM1Q86U86 1689 aa32.15■■■□□ 2.74
NPAS3-203ENST00000357798 MBD5Q9P267 1494 aa32.14■■■□□ 2.74
NPAS3-203ENST00000357798 SLC4A1APQ9BWU0 796 aaKnown RBP32.1■■■□□ 2.73
NPAS3-203ENST00000357798 BCORL1Q5H9F3 1711 aa32.1■■■□□ 2.73
NPAS3-203ENST00000357798 KIF14Q15058 1648 aa32.07■■■□□ 2.72
NPAS3-203ENST00000357798 ARID4BQ4LE39 1312 aaPredicted RBP32.07■■■□□ 2.72
NPAS3-203ENST00000357798 PDS5BQ9NTI5 1447 aa32.07■■■□□ 2.72
NPAS3-203ENST00000357798 ADAMTS12P58397 1594 aa32.07■■■□□ 2.72
NPAS3-203ENST00000357798 PZPP20742 1482 aa32.07■■■□□ 2.72
NPAS3-203ENST00000357798 CCDC136Q96JN2 1154 aa32.05■■■□□ 2.72
NPAS3-203ENST00000357798 PAK3O75914 559 aaPredicted RBP32.03■■■□□ 2.72
NPAS3-203ENST00000357798 KDM5CP41229 1560 aa32.02■■■□□ 2.72
NPAS3-203ENST00000357798 USP47Q96K76 1375 aa32.02■■■□□ 2.72
NPAS3-203ENST00000357798 ADGBQ8N7X0 1667 aa32.01■■■□□ 2.72
NPAS3-203ENST00000357798 ANP32AP39687 249 aaKnown RBP32.01■■■□□ 2.71
NPAS3-203ENST00000357798 IPO9Q96P70 1041 aaKnown RBP31.99■■■□□ 2.71
NPAS3-203ENST00000357798 ROCK2O75116 1388 aaKnown RBP31.97■■■□□ 2.71
NPAS3-203ENST00000357798 KIAA1107Q9UPP5 1409 aa31.96■■■□□ 2.71
NPAS3-203ENST00000357798 PNISRQ8TF01 805 aaKnown RBP31.93■■■□□ 2.7
NPAS3-203ENST00000357798 NBR1Q14596 966 aa31.92■■■□□ 2.7
NPAS3-203ENST00000357798 ZNF644Q9H582 1327 aaPredicted RBP31.91■■■□□ 2.7
NPAS3-203ENST00000357798 KIAA0556O60303 1618 aa31.9■■■□□ 2.7
NPAS3-203ENST00000357798 NUP153P49790 1475 aaKnown RBP31.9■■■□□ 2.7
NPAS3-203ENST00000357798 ITSN2Q9NZM3 1697 aa31.89■■■□□ 2.7
NPAS3-203ENST00000357798 ADGRL2O95490 1459 aa31.89■■■□□ 2.7
NPAS3-203ENST00000357798 ARID3CA6NKF2 412 aa31.89■■■□□ 2.7
NPAS3-203ENST00000357798 RAPGEF6Q8TEU7 1601 aa31.89■■■□□ 2.69
NPAS3-203ENST00000357798 UHRF1BP1Q6BDS2 1440 aa31.88■■■□□ 2.69
NPAS3-203ENST00000357798 CROCC2H7BZ55 1655 aa31.88■■■□□ 2.69
NPAS3-203ENST00000357798 RALGAPBQ86X10 1494 aa31.88■■■□□ 2.69
NPAS3-203ENST00000357798 CAMSAP2Q08AD1 1489 aa31.87■■■□□ 2.69
NPAS3-203ENST00000357798 LRPPRCP42704 1394 aaKnown RBP31.86■■■□□ 2.69
NPAS3-203ENST00000357798 ZBTB47Q9UFB7 747 aaPredicted RBP31.86■■■□□ 2.69
NPAS3-203ENST00000357798 KTN1Q86UP2 1357 aaKnown RBP31.84■■■□□ 2.69
NPAS3-203ENST00000357798 KIF15Q9NS87 1388 aa31.84■■■□□ 2.69
NPAS3-203ENST00000357798 TMC1Q8TDI8 760 aa31.83■■■□□ 2.69
NPAS3-203ENST00000357798 POLR3GLQ9BT43 218 aa31.82■■■□□ 2.68
NPAS3-203ENST00000357798 DISP1Q96F81 1524 aa31.81■■■□□ 2.68
NPAS3-203ENST00000357798 BRD4O60885 1362 aaPredicted RBP31.81■■■□□ 2.68
NPAS3-203ENST00000357798 ARHGEF12Q9NZN5 1544 aa31.8■■■□□ 2.68
NPAS3-203ENST00000357798 RTL5Q5HYW3 569 aaPredicted RBP31.79■■■□□ 2.68
NPAS3-203ENST00000357798 E9PCH4 1651 aa31.78■■■□□ 2.68
NPAS3-203ENST00000357798 TROQ12816 1431 aaPredicted RBP31.77■■■□□ 2.68
NPAS3-203ENST00000357798 KIAA0586Q9BVV6 1533 aa31.76■■■□□ 2.68
NPAS3-203ENST00000357798 CNGB1Q14028 1251 aaPredicted RBP31.76■■■□□ 2.68
NPAS3-203ENST00000357798 ADCY10Q96PN6 1610 aa31.76■■■□□ 2.67
NPAS3-203ENST00000357798 ZNF326Q5BKZ1 582 aaKnown RBP31.75■■■□□ 2.67
NPAS3-203ENST00000357798 PKD2Q13563 968 aa31.74■■■□□ 2.67
NPAS3-203ENST00000357798 MYBBP1AQ9BQG0 1328 aaKnown RBP31.74■■■□□ 2.67
NPAS3-203ENST00000357798 RRP1P56182 461 aaKnown RBP31.73■■■□□ 2.67
NPAS3-203ENST00000357798 RALBP1Q15311 655 aa31.72■■■□□ 2.67
NPAS3-203ENST00000357798 ANKRD30AQ9BXX3 1397 aa31.71■■■□□ 2.67
NPAS3-203ENST00000357798 TCERG1O14776 1098 aaKnown RBP31.71■■■□□ 2.67
NPAS3-203ENST00000357798 GPATCH8Q9UKJ3 1502 aaKnown RBP31.71■■■□□ 2.67
NPAS3-203ENST00000357798 CFDP1Q9UEE9 299 aaPredicted RBP31.69■■■□□ 2.66
NPAS3-203ENST00000357798 PRG4Q92954 1404 aaPredicted RBP31.67■■■□□ 2.66
NPAS3-203ENST00000357798 CARD11Q9BXL7 1154 aa31.66■■■□□ 2.66
NPAS3-203ENST00000357798 ANKRD50Q9ULJ7 1429 aa31.65■■■□□ 2.66
NPAS3-203ENST00000357798 KDM5DQ9BY66 1539 aa31.65■■■□□ 2.66
NPAS3-203ENST00000357798 PDE3BQ13370 1112 aa31.62■■■□□ 2.65
NPAS3-203ENST00000357798 RCAN3Q9UKA8 241 aa31.62■■■□□ 2.65
NPAS3-203ENST00000357798 EXOC6Q8TAG9 804 aa31.61■■■□□ 2.65
NPAS3-203ENST00000357798 CEP170Q5SW79 1584 aa31.61■■■□□ 2.65
NPAS3-203ENST00000357798 MS4A1P11836 297 aa31.6■■■□□ 2.65
NPAS3-203ENST00000357798 SHANK2Q9UPX8 1470 aa31.6■■■□□ 2.65
NPAS3-203ENST00000357798 SENP3-EIF4A1A0A087X0R7 540 aa31.59■■■□□ 2.65
NPAS3-203ENST00000357798 MRC2Q9UBG0 1479 aa31.56■■■□□ 2.64
NPAS3-203ENST00000357798 ST20-MTHFSA0A0A6YYL1 179 aa31.56■■■□□ 2.64
NPAS3-203ENST00000357798 PDE4AP27815 886 aa31.55■■■□□ 2.64
NPAS3-203ENST00000357798 CDC42BPAQ5VT25 1732 aa31.55■■■□□ 2.64
NPAS3-203ENST00000357798 PARD3Q8TEW0 1356 aa31.54■■■□□ 2.64
NPAS3-203ENST00000357798 NLRP13Q86W25 1043 aa31.53■■■□□ 2.64
NPAS3-203ENST00000357798 BACH2Q9BYV9 841 aa31.53■■■□□ 2.64
NPAS3-203ENST00000357798 NUP155O75694 1391 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms