RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 PLCH2O75038 1416 aa17.02■□□□□ 0.31
UBE2D3-206ENST00000357194 MLECQ14165 292 aa17.01■□□□□ 0.31
UBE2D3-206ENST00000357194 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
UBE2D3-206ENST00000357194 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
UBE2D3-206ENST00000357194 HSPA2P54652 639 aa17■□□□□ 0.31
UBE2D3-206ENST00000357194 FMN1Q68DA7 1419 aa16.97■□□□□ 0.31
UBE2D3-206ENST00000357194 EFCAB2Q5VUJ9 269 aa16.97■□□□□ 0.31
UBE2D3-206ENST00000357194 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.31
UBE2D3-206ENST00000357194 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-206ENST00000357194 FER1L4A9Z1Z3 1794 aa16.96■□□□□ 0.31
UBE2D3-206ENST00000357194 ATP10AO60312 1499 aa16.94■□□□□ 0.3
UBE2D3-206ENST00000357194 ARHGAP35Q9NRY4 1499 aa16.94■□□□□ 0.3
UBE2D3-206ENST00000357194 KIF14Q15058 1648 aa16.92■□□□□ 0.3
UBE2D3-206ENST00000357194 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
UBE2D3-206ENST00000357194 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
UBE2D3-206ENST00000357194 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-206ENST00000357194 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
UBE2D3-206ENST00000357194 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
UBE2D3-206ENST00000357194 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-206ENST00000357194 AFAP1Q8N556 730 aa16.88■□□□□ 0.29
UBE2D3-206ENST00000357194 LRRIQ1Q96JM4 1722 aa16.87■□□□□ 0.29
UBE2D3-206ENST00000357194 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
UBE2D3-206ENST00000357194 CLIP1P30622 1438 aa16.87■□□□□ 0.29
UBE2D3-206ENST00000357194 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
UBE2D3-206ENST00000357194 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
UBE2D3-206ENST00000357194 KDM5CP41229 1560 aa16.85■□□□□ 0.29
UBE2D3-206ENST00000357194 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
UBE2D3-206ENST00000357194 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
UBE2D3-206ENST00000357194 REREQ9P2R6 1566 aa16.79■□□□□ 0.28
UBE2D3-206ENST00000357194 MLH3Q9UHC1 1453 aa16.79■□□□□ 0.28
UBE2D3-206ENST00000357194 ABCA6Q8N139 1617 aa16.78■□□□□ 0.28
UBE2D3-206ENST00000357194 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
UBE2D3-206ENST00000357194 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-206ENST00000357194 UHRF1BP1Q6BDS2 1440 aa16.78■□□□□ 0.28
UBE2D3-206ENST00000357194 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
UBE2D3-206ENST00000357194 STRCQ7RTU9 1775 aa16.77■□□□□ 0.28
UBE2D3-206ENST00000357194 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.27
UBE2D3-206ENST00000357194 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.27
UBE2D3-206ENST00000357194 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
UBE2D3-206ENST00000357194 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
UBE2D3-206ENST00000357194 ABCC1P33527 1531 aa16.75■□□□□ 0.27
UBE2D3-206ENST00000357194 C3P01024 1663 aa16.75■□□□□ 0.27
UBE2D3-206ENST00000357194 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
UBE2D3-206ENST00000357194 AGLP35573 1532 aa16.74■□□□□ 0.27
UBE2D3-206ENST00000357194 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
UBE2D3-206ENST00000357194 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
UBE2D3-206ENST00000357194 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-206ENST00000357194 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
UBE2D3-206ENST00000357194 PTPRTO14522 1441 aa16.67■□□□□ 0.26
UBE2D3-206ENST00000357194 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
UBE2D3-206ENST00000357194 SAMD9LQ8IVG5 1584 aa16.67■□□□□ 0.26
UBE2D3-206ENST00000357194 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.264e-13■■■■■ 32.7
UBE2D3-206ENST00000357194 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-206ENST00000357194 SYCP2Q9BX26 1530 aa16.64■□□□□ 0.25
UBE2D3-206ENST00000357194 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-206ENST00000357194 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-206ENST00000357194 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
UBE2D3-206ENST00000357194 ZMYM3Q14202 1370 aa16.62■□□□□ 0.25
UBE2D3-206ENST00000357194 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
UBE2D3-206ENST00000357194 NCOA1Q15788 1441 aa16.61■□□□□ 0.25
UBE2D3-206ENST00000357194 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
UBE2D3-206ENST00000357194 NPATQ14207 1427 aa16.6■□□□□ 0.25
UBE2D3-206ENST00000357194 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
UBE2D3-206ENST00000357194 DISP3Q9P2K9 1392 aa16.59■□□□□ 0.25
UBE2D3-206ENST00000357194 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
UBE2D3-206ENST00000357194 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
UBE2D3-206ENST00000357194 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
UBE2D3-206ENST00000357194 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.24
UBE2D3-206ENST00000357194 INO80Q9ULG1 1556 aaPredicted RBP16.57■□□□□ 0.24
UBE2D3-206ENST00000357194 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
UBE2D3-206ENST00000357194 A2MP01023 1474 aa16.56■□□□□ 0.24
UBE2D3-206ENST00000357194 GGT6Q6P531 493 aa16.56■□□□□ 0.24
UBE2D3-206ENST00000357194 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
UBE2D3-206ENST00000357194 MTUS2Q5JR59 1369 aa16.55■□□□□ 0.24
UBE2D3-206ENST00000357194 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
UBE2D3-206ENST00000357194 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
UBE2D3-206ENST00000357194 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
UBE2D3-206ENST00000357194 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-206ENST00000357194 PTPRKQ15262 1439 aa16.52■□□□□ 0.23
UBE2D3-206ENST00000357194 MYO3AQ8NEV4 1616 aa16.52■□□□□ 0.23
UBE2D3-206ENST00000357194 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-206ENST00000357194 ADGBQ8N7X0 1667 aa16.51■□□□□ 0.23
UBE2D3-206ENST00000357194 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-206ENST00000357194 PKD2Q13563 968 aa16.5■□□□□ 0.23
UBE2D3-206ENST00000357194 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
UBE2D3-206ENST00000357194 CEP170BQ9Y4F5 1589 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-206ENST00000357194 ZNF335Q9H4Z2 1342 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-206ENST00000357194 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
UBE2D3-206ENST00000357194 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
UBE2D3-206ENST00000357194 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
UBE2D3-206ENST00000357194 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
UBE2D3-206ENST00000357194 SOCS7O14512 581 aa16.47■□□□□ 0.23
UBE2D3-206ENST00000357194 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
UBE2D3-206ENST00000357194 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-206ENST00000357194 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
UBE2D3-206ENST00000357194 DHX29Q7Z478 1369 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-206ENST00000357194 UBAP1LF5GYI3 381 aa16.44■□□□□ 0.22
UBE2D3-206ENST00000357194 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
UBE2D3-206ENST00000357194 A2ML1A8K2U0 1454 aa16.42■□□□□ 0.22
UBE2D3-206ENST00000357194 DNMT1P26358 1616 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms