RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 EIF4G2P78344 907 aaKnown RBP eCLIP19.97■□□□□ 0.79
TOP3B-201ENST00000357179 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
TOP3B-201ENST00000357179 UBE2Q2Q8WVN8 375 aa19.95■□□□□ 0.78
TOP3B-201ENST00000357179 RRP7BPQ9NSQ0 103 aa19.93■□□□□ 0.78
TOP3B-201ENST00000357179 EPRSP07814 1512 aaKnown RBP19.93■□□□□ 0.78
TOP3B-201ENST00000357179 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
TOP3B-201ENST00000357179 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
TOP3B-201ENST00000357179 KDM6BO15054 1643 aa19.92■□□□□ 0.78
TOP3B-201ENST00000357179 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
TOP3B-201ENST00000357179 ZBED9Q6R2W3 1325 aa19.92■□□□□ 0.78
TOP3B-201ENST00000357179 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
TOP3B-201ENST00000357179 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
TOP3B-201ENST00000357179 IQGAP2Q13576 1575 aa19.89■□□□□ 0.78
TOP3B-201ENST00000357179 ROCK1Q13464 1354 aa19.89■□□□□ 0.77
TOP3B-201ENST00000357179 CCDC7Q96M83 1385 aa19.88■□□□□ 0.77
TOP3B-201ENST00000357179 RTN4Q9NQC3 1192 aaKnown RBP19.88■□□□□ 0.77
TOP3B-201ENST00000357179 WDR62O43379 1518 aa19.87■□□□□ 0.77
TOP3B-201ENST00000357179 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
TOP3B-201ENST00000357179 RPRD2Q5VT52 1461 aaKnown RBP19.87■□□□□ 0.77
TOP3B-201ENST00000357179 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
TOP3B-201ENST00000357179 L3MBTL2Q969R5 705 aa19.85■□□□□ 0.77
TOP3B-201ENST00000357179 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
TOP3B-201ENST00000357179 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-201ENST00000357179 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-201ENST00000357179 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-201ENST00000357179 ANKRD30BQ9BXX2 1392 aa19.84■□□□□ 0.77
TOP3B-201ENST00000357179 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.83■□□□□ 0.77
TOP3B-201ENST00000357179 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
TOP3B-201ENST00000357179 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
TOP3B-201ENST00000357179 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
TOP3B-201ENST00000357179 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
TOP3B-201ENST00000357179 DNMT1P26358 1616 aaKnown RBP19.81■□□□□ 0.76
TOP3B-201ENST00000357179 DAPK1P53355 1430 aa19.81■□□□□ 0.76
TOP3B-201ENST00000357179 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
TOP3B-201ENST00000357179 SPATA31E1Q6ZUB1 1445 aa19.8■□□□□ 0.76
TOP3B-201ENST00000357179 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
TOP3B-201ENST00000357179 RNF123Q5XPI4 1314 aa19.77■□□□□ 0.75
TOP3B-201ENST00000357179 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
TOP3B-201ENST00000357179 ABCC5O15440 1437 aa19.76■□□□□ 0.75
TOP3B-201ENST00000357179 MRS2Q9HD23 443 aa19.74■□□□□ 0.75
TOP3B-201ENST00000357179 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
TOP3B-201ENST00000357179 KIF7Q2M1P5 1343 aa19.72■□□□□ 0.75
TOP3B-201ENST00000357179 NEFMP07197 916 aa19.72■□□□□ 0.75
TOP3B-201ENST00000357179 FOXD1Q16676 465 aa19.7■□□□□ 0.74
TOP3B-201ENST00000357179 KIAA0556O60303 1618 aa19.68■□□□□ 0.74
TOP3B-201ENST00000357179 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
TOP3B-201ENST00000357179 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
TOP3B-201ENST00000357179 NUDCQ9Y266 331 aa19.66■□□□□ 0.74
TOP3B-201ENST00000357179 PZPP20742 1482 aa19.66■□□□□ 0.74
TOP3B-201ENST00000357179 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
TOP3B-201ENST00000357179 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
TOP3B-201ENST00000357179 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
TOP3B-201ENST00000357179 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
TOP3B-201ENST00000357179 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
TOP3B-201ENST00000357179 DISP1Q96F81 1524 aa19.64■□□□□ 0.74
TOP3B-201ENST00000357179 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.74
TOP3B-201ENST00000357179 ADGBQ8N7X0 1667 aa19.64■□□□□ 0.73
TOP3B-201ENST00000357179 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
TOP3B-201ENST00000357179 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
TOP3B-201ENST00000357179 ITSN2Q9NZM3 1697 aa19.61■□□□□ 0.73
TOP3B-201ENST00000357179 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
TOP3B-201ENST00000357179 KIF14Q15058 1648 aa19.6■□□□□ 0.73
TOP3B-201ENST00000357179 BRPF3Q9ULD4 1205 aa19.6■□□□□ 0.73
TOP3B-201ENST00000357179 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
TOP3B-201ENST00000357179 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
TOP3B-201ENST00000357179 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-201ENST00000357179 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-201ENST00000357179 CAMSAP2Q08AD1 1489 aa19.59■□□□□ 0.73
TOP3B-201ENST00000357179 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
TOP3B-201ENST00000357179 CROCC2H7BZ55 1655 aa19.57■□□□□ 0.72
TOP3B-201ENST00000357179 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
TOP3B-201ENST00000357179 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
TOP3B-201ENST00000357179 KDM5CP41229 1560 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 USP47Q96K76 1375 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 GSE1Q14687 1217 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
TOP3B-201ENST00000357179 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
TOP3B-201ENST00000357179 PDE4AP27815 886 aa19.54■□□□□ 0.72
TOP3B-201ENST00000357179 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
TOP3B-201ENST00000357179 BACH2Q9BYV9 841 aa19.53■□□□□ 0.72
TOP3B-201ENST00000357179 EIF5BO60841 1220 aaKnown RBP19.53■□□□□ 0.72
TOP3B-201ENST00000357179 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
TOP3B-201ENST00000357179 RALGAPBQ86X10 1494 aa19.51■□□□□ 0.71
TOP3B-201ENST00000357179 MS4A1P11836 297 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
TOP3B-201ENST00000357179 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
TOP3B-201ENST00000357179 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
TOP3B-201ENST00000357179 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
TOP3B-201ENST00000357179 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
TOP3B-201ENST00000357179 SHANK2Q9UPX8 1470 aa19.46■□□□□ 0.71
TOP3B-201ENST00000357179 PKD2Q13563 968 aa19.46■□□□□ 0.71
TOP3B-201ENST00000357179 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
TOP3B-201ENST00000357179 KDM5DQ9BY66 1539 aa19.45■□□□□ 0.7
TOP3B-201ENST00000357179 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
TOP3B-201ENST00000357179 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms