RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 NAIPQ13075 1403 aa33.82■■■■□ 3
SCAMP3-202ENST00000355379 ABCC5O15440 1437 aa33.79■■■■□ 3
SCAMP3-202ENST00000355379 CDC42BPBQ9Y5S2 1711 aa33.78■■■■□ 3
SCAMP3-202ENST00000355379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.78■■■■□ 3
SCAMP3-202ENST00000355379 ZNF644Q9H582 1327 aaPredicted RBP33.77■■■■□ 3
SCAMP3-202ENST00000355379 ROCK1Q13464 1354 aa33.76■■■■□ 3
SCAMP3-202ENST00000355379 CROCC2H7BZ55 1655 aa33.76■■■□□ 2.99
SCAMP3-202ENST00000355379 TTC37Q6PGP7 1564 aa33.75■■■□□ 2.99
SCAMP3-202ENST00000355379 MYO5CQ9NQX4 1742 aa33.73■■■□□ 2.99
SCAMP3-202ENST00000355379 ADGBQ8N7X0 1667 aa33.71■■■□□ 2.99
SCAMP3-202ENST00000355379 ARHGEF5Q12774 1597 aa33.66■■■□□ 2.98
SCAMP3-202ENST00000355379 CHIC2Q9UKJ5 165 aa33.65■■■□□ 2.98
SCAMP3-202ENST00000355379 ZNF777Q9ULD5 760 aaPredicted RBP33.65■■■□□ 2.98
SCAMP3-202ENST00000355379 MAPKBP1O60336 1514 aa33.64■■■□□ 2.98
SCAMP3-202ENST00000355379 SAMD9LQ8IVG5 1584 aa33.64■■■□□ 2.98
SCAMP3-202ENST00000355379 ADGRL2O95490 1459 aa33.63■■■□□ 2.97
SCAMP3-202ENST00000355379 WDR7Q9Y4E6 1490 aa33.63■■■□□ 2.97
SCAMP3-202ENST00000355379 ACIN1Q9UKV3 1341 aaKnown RBP33.62■■■□□ 2.97
SCAMP3-202ENST00000355379 SHANK2Q9UPX8 1470 aa33.62■■■□□ 2.97
SCAMP3-202ENST00000355379 RRP7BPQ9NSQ0 103 aa33.61■■■□□ 2.97
SCAMP3-202ENST00000355379 ARHGAP5Q13017 1502 aa33.59■■■□□ 2.97
SCAMP3-202ENST00000355379 KCNH8Q96L42 1107 aa33.57■■■□□ 2.96
SCAMP3-202ENST00000355379 PLCH2O75038 1416 aa33.57■■■□□ 2.96
SCAMP3-202ENST00000355379 ARAP3Q8WWN8 1544 aa33.55■■■□□ 2.96
SCAMP3-202ENST00000355379 PLEKHH2Q8IVE3 1493 aa33.55■■■□□ 2.96
SCAMP3-202ENST00000355379 MBD5Q9P267 1494 aa33.55■■■□□ 2.96
SCAMP3-202ENST00000355379 KDM6BO15054 1643 aa33.54■■■□□ 2.96
SCAMP3-202ENST00000355379 RSPH4AQ5TD94 716 aa33.53■■■□□ 2.96
SCAMP3-202ENST00000355379 NCOA1Q15788 1441 aa33.53■■■□□ 2.96
SCAMP3-202ENST00000355379 ABCA9Q8IUA7 1624 aa33.51■■■□□ 2.96
SCAMP3-202ENST00000355379 ASXL2Q76L83 1435 aa33.5■■■□□ 2.95
SCAMP3-202ENST00000355379 KIAA1107Q9UPP5 1409 aa33.5■■■□□ 2.95
SCAMP3-202ENST00000355379 NPM1P06748 294 aaKnown RBP eCLIP33.49■■■□□ 2.95
SCAMP3-202ENST00000355379 ANKRD30AQ9BXX3 1397 aa33.49■■■□□ 2.95
SCAMP3-202ENST00000355379 CCDC141Q6ZP82 1450 aa33.49■■■□□ 2.95
SCAMP3-202ENST00000355379 C9orf84Q5VXU9 1444 aa33.47■■■□□ 2.95
SCAMP3-202ENST00000355379 MAST1Q9Y2H9 1570 aa33.45■■■□□ 2.95
SCAMP3-202ENST00000355379 SYCP2Q9BX26 1530 aa33.44■■■□□ 2.94
SCAMP3-202ENST00000355379 RIMBP3CA6NJZ7 1639 aa33.44■■■□□ 2.94
SCAMP3-202ENST00000355379 RIMBP3BA6NNM3 1639 aa33.44■■■□□ 2.94
SCAMP3-202ENST00000355379 RIMBP3Q9UFD9 1639 aa33.44■■■□□ 2.94
SCAMP3-202ENST00000355379 HNRNPMP52272 730 aaKnown RBP eCLIP33.43■■■□□ 2.94
SCAMP3-202ENST00000355379 TSPY4P0CV99 314 aa33.43■■■□□ 2.94
SCAMP3-202ENST00000355379 TSPY10P0CW01 314 aa33.43■■■□□ 2.94
SCAMP3-202ENST00000355379 EFCAB2Q5VUJ9 269 aa33.43■■■□□ 2.94
SCAMP3-202ENST00000355379 ABCC1P33527 1531 aa33.38■■■□□ 2.93
SCAMP3-202ENST00000355379 TRIM52Q96A61 297 aa33.32■■■□□ 2.92
SCAMP3-202ENST00000355379 ARHGEF12Q9NZN5 1544 aa33.31■■■□□ 2.92
SCAMP3-202ENST00000355379 TIMELESSQ9UNS1 1208 aa33.3■■■□□ 2.92
SCAMP3-202ENST00000355379 ANKRD50Q9ULJ7 1429 aa33.3■■■□□ 2.92
SCAMP3-202ENST00000355379 PLXNC1O60486 1568 aa33.29■■■□□ 2.92
SCAMP3-202ENST00000355379 DENND4BO75064 1496 aaPredicted RBP33.27■■■□□ 2.92
SCAMP3-202ENST00000355379 FANCAO15360 1455 aa33.25■■■□□ 2.91
SCAMP3-202ENST00000355379 KIF15Q9NS87 1388 aa33.25■■■□□ 2.91
SCAMP3-202ENST00000355379 MPHOSPH9Q99550 1183 aa33.25■■■□□ 2.91
SCAMP3-202ENST00000355379 SIN3AQ96ST3 1273 aa33.22■■■□□ 2.91
SCAMP3-202ENST00000355379 CFAP74Q9C0B2 1584 aa33.2■■■□□ 2.91
SCAMP3-202ENST00000355379 CYB5RLQ6IPT4 315 aa33.18■■■□□ 2.9
SCAMP3-202ENST00000355379 PZPP20742 1482 aa33.17■■■□□ 2.9
SCAMP3-202ENST00000355379 TRAPPC8Q9Y2L5 1435 aa33.17■■■□□ 2.9
SCAMP3-202ENST00000355379 KDM5DQ9BY66 1539 aa33.17■■■□□ 2.9
SCAMP3-202ENST00000355379 RTEL1-TNFRSF6BF6WH68 1400 aa33.15■■■□□ 2.9
SCAMP3-202ENST00000355379 NEUROD1Q13562 356 aa33.14■■■□□ 2.9
SCAMP3-202ENST00000355379 DUOX2Q9NRD8 1548 aa33.13■■■□□ 2.89
SCAMP3-202ENST00000355379 CD109Q6YHK3 1445 aa33.12■■■□□ 2.89
SCAMP3-202ENST00000355379 ADGRL1O94910 1474 aa33.11■■■□□ 2.89
SCAMP3-202ENST00000355379 ZNF316A6NFI3 1004 aaPredicted RBP33.08■■■□□ 2.89
SCAMP3-202ENST00000355379 SLC4A1APQ9BWU0 796 aaKnown RBP33.08■■■□□ 2.89
SCAMP3-202ENST00000355379 GLI2P10070 1586 aa33.08■■■□□ 2.89
SCAMP3-202ENST00000355379 ZFYVE16Q7Z3T8 1539 aa33.06■■■□□ 2.88
SCAMP3-202ENST00000355379 UNC13BO14795 1591 aa33.06■■■□□ 2.88
SCAMP3-202ENST00000355379 ERBINQ96RT1 1412 aa33.05■■■□□ 2.88
SCAMP3-202ENST00000355379 SCAPERQ9BY12 1400 aa33.05■■■□□ 2.88
SCAMP3-202ENST00000355379 INO80Q9ULG1 1556 aaPredicted RBP33.05■■■□□ 2.88
SCAMP3-202ENST00000355379 ANKRD30BQ9BXX2 1392 aa33.04■■■□□ 2.88
SCAMP3-202ENST00000355379 SPAG9O60271 1321 aaKnown RBP33.03■■■□□ 2.88
SCAMP3-202ENST00000355379 MAP3K4Q9Y6R4 1608 aa33.03■■■□□ 2.88
SCAMP3-202ENST00000355379 TONSLQ96HA7 1378 aa33.03■■■□□ 2.88
SCAMP3-202ENST00000355379 NUP155O75694 1391 aa33■■■□□ 2.87
SCAMP3-202ENST00000355379 ATP7AQ04656 1500 aa32.99■■■□□ 2.87
SCAMP3-202ENST00000355379 NEO1Q92859 1461 aa32.98■■■□□ 2.87
SCAMP3-202ENST00000355379 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
SCAMP3-202ENST00000355379 PPP1R15AO75807 674 aaPredicted RBP32.97■■■□□ 2.87
SCAMP3-202ENST00000355379 ZNF518AQ6AHZ1 1483 aa32.95■■■□□ 2.86
SCAMP3-202ENST00000355379 RPRD2Q5VT52 1461 aaKnown RBP32.93■■■□□ 2.86
SCAMP3-202ENST00000355379 MAGI2Q86UL8 1455 aa32.93■■■□□ 2.86
SCAMP3-202ENST00000355379 FOXD1Q16676 465 aa32.92■■■□□ 2.86
SCAMP3-202ENST00000355379 IQGAP3Q86VI3 1631 aa32.92■■■□□ 2.86
SCAMP3-202ENST00000355379 DIP2BQ9P265 1576 aa32.91■■■□□ 2.86
SCAMP3-202ENST00000355379 FAM135AQ9P2D6 1515 aa32.91■■■□□ 2.86
SCAMP3-202ENST00000355379 KDM5CP41229 1560 aa32.9■■■□□ 2.86
SCAMP3-202ENST00000355379 PKD2Q13563 968 aa32.9■■■□□ 2.86
SCAMP3-202ENST00000355379 KIDINS220Q9ULH0 1771 aa32.89■■■□□ 2.86
SCAMP3-202ENST00000355379 POGZQ7Z3K3 1410 aa32.88■■■□□ 2.85
SCAMP3-202ENST00000355379 EIF2AK4Q9P2K8 1649 aaKnown RBP32.85■■■□□ 2.85
SCAMP3-202ENST00000355379 DEPDC5O75140 1603 aa32.83■■■□□ 2.85
SCAMP3-202ENST00000355379 MLH3Q9UHC1 1453 aa32.82■■■□□ 2.84
SCAMP3-202ENST00000355379 HECW2Q9P2P5 1572 aa32.8■■■□□ 2.84
SCAMP3-202ENST00000355379 DHX29Q7Z478 1369 aaKnown RBP32.78■■■□□ 2.84
SCAMP3-202ENST00000355379 TEX14Q8IWB6 1497 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms