RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 KIF14Q15058 1648 aa15.46■□□□□ 0.07
PTPN2-203ENST00000353319 ABCC2Q92887 1545 aa15.46■□□□□ 0.06
PTPN2-203ENST00000353319 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
PTPN2-203ENST00000353319 ROCK1Q13464 1354 aa15.45■□□□□ 0.06
PTPN2-203ENST00000353319 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
PTPN2-203ENST00000353319 DNMT1P26358 1616 aaKnown RBP15.44■□□□□ 0.06
PTPN2-203ENST00000353319 DAPK1P53355 1430 aa15.44■□□□□ 0.06
PTPN2-203ENST00000353319 ABCC5O15440 1437 aa15.43■□□□□ 0.06
PTPN2-203ENST00000353319 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
PTPN2-203ENST00000353319 ZNF644Q9H582 1327 aaPredicted RBP15.41■□□□□ 0.06
PTPN2-203ENST00000353319 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
PTPN2-203ENST00000353319 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
PTPN2-203ENST00000353319 CDC42BPAQ5VT25 1732 aa15.4■□□□□ 0.06
PTPN2-203ENST00000353319 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
PTPN2-203ENST00000353319 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
PTPN2-203ENST00000353319 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
PTPN2-203ENST00000353319 CHIC2Q9UKJ5 165 aa15.38■□□□□ 0.05
PTPN2-203ENST00000353319 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
PTPN2-203ENST00000353319 ADGRL2O95490 1459 aa15.35■□□□□ 0.05
PTPN2-203ENST00000353319 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
PTPN2-203ENST00000353319 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
PTPN2-203ENST00000353319 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
PTPN2-203ENST00000353319 CROCC2H7BZ55 1655 aa15.32■□□□□ 0.04
PTPN2-203ENST00000353319 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
PTPN2-203ENST00000353319 ZNF777Q9ULD5 760 aaPredicted RBP15.32■□□□□ 0.04
PTPN2-203ENST00000353319 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
PTPN2-203ENST00000353319 ARHGEF5Q12774 1597 aa15.31■□□□□ 0.04
PTPN2-203ENST00000353319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPN2-203ENST00000353319 ADGBQ8N7X0 1667 aa15.31■□□□□ 0.04
PTPN2-203ENST00000353319 KDM6BO15054 1643 aa15.3■□□□□ 0.04
PTPN2-203ENST00000353319 CDC42BPBQ9Y5S2 1711 aa15.3■□□□□ 0.04
PTPN2-203ENST00000353319 SIN3AQ96ST3 1273 aa15.29■□□□□ 0.04
PTPN2-203ENST00000353319 ANKRD30AQ9BXX3 1397 aa15.29■□□□□ 0.04
PTPN2-203ENST00000353319 MBD5Q9P267 1494 aa15.29■□□□□ 0.04
PTPN2-203ENST00000353319 TTC37Q6PGP7 1564 aa15.26■□□□□ 0.03
PTPN2-203ENST00000353319 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
PTPN2-203ENST00000353319 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
PTPN2-203ENST00000353319 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
PTPN2-203ENST00000353319 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
PTPN2-203ENST00000353319 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
PTPN2-203ENST00000353319 DENND4BO75064 1496 aaPredicted RBP15.26■□□□□ 0.03
PTPN2-203ENST00000353319 PLCH2O75038 1416 aa15.25■□□□□ 0.03
PTPN2-203ENST00000353319 KIAA1107Q9UPP5 1409 aa15.25■□□□□ 0.03
PTPN2-203ENST00000353319 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
PTPN2-203ENST00000353319 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
PTPN2-203ENST00000353319 MYO5CQ9NQX4 1742 aa15.25■□□□□ 0.03
PTPN2-203ENST00000353319 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
PTPN2-203ENST00000353319 C9orf84Q5VXU9 1444 aa15.24■□□□□ 0.03
PTPN2-203ENST00000353319 PPP1R15AO75807 674 aaPredicted RBP15.23■□□□□ 0.03
PTPN2-203ENST00000353319 CCDC141Q6ZP82 1450 aa15.23■□□□□ 0.03
PTPN2-203ENST00000353319 HNRNPMP52272 730 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTPN2-203ENST00000353319 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
PTPN2-203ENST00000353319 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
PTPN2-203ENST00000353319 KCNH8Q96L42 1107 aa15.22■□□□□ 0.03
PTPN2-203ENST00000353319 MAST1Q9Y2H9 1570 aa15.2■□□□□ 0.02
PTPN2-203ENST00000353319 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
PTPN2-203ENST00000353319 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
PTPN2-203ENST00000353319 WDR7Q9Y4E6 1490 aa15.2■□□□□ 0.02
PTPN2-203ENST00000353319 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
PTPN2-203ENST00000353319 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
PTPN2-203ENST00000353319 PZPP20742 1482 aa15.16■□□□□ 0.02
PTPN2-203ENST00000353319 SYCP2Q9BX26 1530 aa15.16■□□□□ 0.02
PTPN2-203ENST00000353319 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
PTPN2-203ENST00000353319 KIF15Q9NS87 1388 aa15.15■□□□□ 0.02
PTPN2-203ENST00000353319 KDM5DQ9BY66 1539 aa15.14■□□□□ 0.01
PTPN2-203ENST00000353319 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
PTPN2-203ENST00000353319 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
PTPN2-203ENST00000353319 ARHGEF12Q9NZN5 1544 aa15.13■□□□□ 0.01
PTPN2-203ENST00000353319 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPN2-203ENST00000353319 ABCC1P33527 1531 aa15.12■□□□□ 0.01
PTPN2-203ENST00000353319 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
PTPN2-203ENST00000353319 RPRD2Q5VT52 1461 aaKnown RBP15.1■□□□□ 0.01
PTPN2-203ENST00000353319 RTEL1-TNFRSF6BF6WH68 1400 aa15.08■□□□□ 0
PTPN2-203ENST00000353319 NUP155O75694 1391 aa15.08■□□□□ 0
PTPN2-203ENST00000353319 DUOX2Q9NRD8 1548 aa15.06■□□□□ 0
PTPN2-203ENST00000353319 TRAPPC8Q9Y2L5 1435 aa15.06■□□□□ 0
PTPN2-203ENST00000353319 PKD2Q13563 968 aa15.06■□□□□ 0
PTPN2-203ENST00000353319 FANCAO15360 1455 aa15.05■□□□□ 0
PTPN2-203ENST00000353319 ERBINQ96RT1 1412 aa15.04■□□□□ -0
PTPN2-203ENST00000353319 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
PTPN2-203ENST00000353319 UNC13BO14795 1591 aa15.03■□□□□ -0
PTPN2-203ENST00000353319 SPAG9O60271 1321 aaKnown RBP15.01□□□□□ -0.01
PTPN2-203ENST00000353319 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
PTPN2-203ENST00000353319 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
PTPN2-203ENST00000353319 MAGI2Q86UL8 1455 aa15□□□□□ -0.01
PTPN2-203ENST00000353319 AFAP1Q8N556 730 aa14.99□□□□□ -0.01
PTPN2-203ENST00000353319 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
PTPN2-203ENST00000353319 MIER1Q8N108 512 aa14.98□□□□□ -0.01
PTPN2-203ENST00000353319 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
PTPN2-203ENST00000353319 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
PTPN2-203ENST00000353319 IQGAP3Q86VI3 1631 aa14.98□□□□□ -0.01
PTPN2-203ENST00000353319 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
PTPN2-203ENST00000353319 CFAP74Q9C0B2 1584 aa14.97□□□□□ -0.01
PTPN2-203ENST00000353319 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.01
PTPN2-203ENST00000353319 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
PTPN2-203ENST00000353319 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
PTPN2-203ENST00000353319 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
PTPN2-203ENST00000353319 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
PTPN2-203ENST00000353319 ATP10AO60312 1499 aa14.93□□□□□ -0.02
PTPN2-203ENST00000353319 ZNF518AQ6AHZ1 1483 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms