RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 CFDP1Q9UEE9 299 aaPredicted RBP32.97■■■□□ 2.87
CNTFR-201ENST00000351266 CAMSAP2Q08AD1 1489 aa32.94■■■□□ 2.86
CNTFR-201ENST00000351266 ZNF644Q9H582 1327 aaPredicted RBP32.89■■■□□ 2.86
CNTFR-201ENST00000351266 TONSLQ96HA7 1378 aa32.88■■■□□ 2.85
CNTFR-201ENST00000351266 ABCC10Q5T3U5 1492 aa32.87■■■□□ 2.85
CNTFR-201ENST00000351266 PPP1R15AO75807 674 aaPredicted RBP32.86■■■□□ 2.85
CNTFR-201ENST00000351266 KDM6BO15054 1643 aa32.83■■■□□ 2.85
CNTFR-201ENST00000351266 TRIM52Q96A61 297 aa32.83■■■□□ 2.85
CNTFR-201ENST00000351266 ADGBQ8N7X0 1667 aa32.81■■■□□ 2.84
CNTFR-201ENST00000351266 MIER1Q8N108 512 aa32.81■■■□□ 2.84
CNTFR-201ENST00000351266 ADGRL2O95490 1459 aa32.8■■■□□ 2.84
CNTFR-201ENST00000351266 CDC42BPAQ5VT25 1732 aa32.8■■■□□ 2.84
CNTFR-201ENST00000351266 CENPBP07199 599 aaPredicted RBP32.8■■■□□ 2.84
CNTFR-201ENST00000351266 CROCC2H7BZ55 1655 aa32.79■■■□□ 2.84
CNTFR-201ENST00000351266 CLASP1Q7Z460 1538 aa32.78■■■□□ 2.84
CNTFR-201ENST00000351266 MPHOSPH9Q99550 1183 aa32.75■■■□□ 2.83
CNTFR-201ENST00000351266 ZNF777Q9ULD5 760 aaPredicted RBP32.75■■■□□ 2.83
CNTFR-201ENST00000351266 NCOA1Q15788 1441 aa32.74■■■□□ 2.83
CNTFR-201ENST00000351266 ABCC2Q92887 1545 aa32.73■■■□□ 2.83
CNTFR-201ENST00000351266 DENND4BO75064 1496 aaPredicted RBP32.73■■■□□ 2.83
CNTFR-201ENST00000351266 SHANK2Q9UPX8 1470 aa32.73■■■□□ 2.83
CNTFR-201ENST00000351266 ANKRD30AQ9BXX3 1397 aa32.71■■■□□ 2.83
CNTFR-201ENST00000351266 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
CNTFR-201ENST00000351266 ARHGEF5Q12774 1597 aa32.64■■■□□ 2.82
CNTFR-201ENST00000351266 PREX2Q70Z35 1606 aa32.63■■■□□ 2.81
CNTFR-201ENST00000351266 UHRF1BP1LA0JNW5 1464 aa32.62■■■□□ 2.81
CNTFR-201ENST00000351266 C9orf84Q5VXU9 1444 aa32.58■■■□□ 2.81
CNTFR-201ENST00000351266 RSPH4AQ5TD94 716 aa32.58■■■□□ 2.81
CNTFR-201ENST00000351266 TSPY4P0CV99 314 aa32.57■■■□□ 2.81
CNTFR-201ENST00000351266 TSPY10P0CW01 314 aa32.57■■■□□ 2.81
CNTFR-201ENST00000351266 KDM5BQ9UGL1 1544 aa32.57■■■□□ 2.8
CNTFR-201ENST00000351266 ANKRD30BQ9BXX2 1392 aa32.55■■■□□ 2.8
CNTFR-201ENST00000351266 SLC4A1APQ9BWU0 796 aaKnown RBP32.55■■■□□ 2.8
CNTFR-201ENST00000351266 CDC42BPBQ9Y5S2 1711 aa32.54■■■□□ 2.8
CNTFR-201ENST00000351266 ANKRD50Q9ULJ7 1429 aa32.53■■■□□ 2.8
CNTFR-201ENST00000351266 MBD5Q9P267 1494 aa32.51■■■□□ 2.8
CNTFR-201ENST00000351266 SAMD9LQ8IVG5 1584 aa32.5■■■□□ 2.79
CNTFR-201ENST00000351266 PZPP20742 1482 aa32.5■■■□□ 2.79
CNTFR-201ENST00000351266 CCDC141Q6ZP82 1450 aa32.5■■■□□ 2.79
CNTFR-201ENST00000351266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.5■■■□□ 2.79
CNTFR-201ENST00000351266 RPRD2Q5VT52 1461 aaKnown RBP32.5■■■□□ 2.79
CNTFR-201ENST00000351266 TTC37Q6PGP7 1564 aa32.47■■■□□ 2.79
CNTFR-201ENST00000351266 PLEKHH2Q8IVE3 1493 aa32.46■■■□□ 2.79
CNTFR-201ENST00000351266 ZCCHC11Q5TAX3 1644 aaKnown RBP32.45■■■□□ 2.79
CNTFR-201ENST00000351266 ARHGAP5Q13017 1502 aa32.44■■■□□ 2.78
CNTFR-201ENST00000351266 MYO5CQ9NQX4 1742 aa32.44■■■□□ 2.78
CNTFR-201ENST00000351266 HNRNPMP52272 730 aaKnown RBP eCLIP32.43■■■□□ 2.78
CNTFR-201ENST00000351266 KIAA1107Q9UPP5 1409 aa32.41■■■□□ 2.78
CNTFR-201ENST00000351266 FOXD1Q16676 465 aa32.41■■■□□ 2.78
CNTFR-201ENST00000351266 SCAF1Q9H7N4 1312 aaKnown RBP32.4■■■□□ 2.78
CNTFR-201ENST00000351266 KDM5DQ9BY66 1539 aa32.39■■■□□ 2.78
CNTFR-201ENST00000351266 KIF15Q9NS87 1388 aa32.39■■■□□ 2.78
CNTFR-201ENST00000351266 MAST1Q9Y2H9 1570 aa32.39■■■□□ 2.78
CNTFR-201ENST00000351266 YTHDC1Q96MU7 727 aaKnown RBP32.39■■■□□ 2.78
CNTFR-201ENST00000351266 L3MBTL2Q969R5 705 aa32.36■■■□□ 2.77
CNTFR-201ENST00000351266 SYCP2Q9BX26 1530 aa32.35■■■□□ 2.77
CNTFR-201ENST00000351266 TEX14Q8IWB6 1497 aa32.33■■■□□ 2.77
CNTFR-201ENST00000351266 PLCH2O75038 1416 aa32.33■■■□□ 2.77
CNTFR-201ENST00000351266 DDX10Q13206 875 aaKnown RBP32.32■■■□□ 2.76
CNTFR-201ENST00000351266 NUP155O75694 1391 aa32.31■■■□□ 2.76
CNTFR-201ENST00000351266 PKD2Q13563 968 aa32.29■■■□□ 2.76
CNTFR-201ENST00000351266 KCNH8Q96L42 1107 aa32.29■■■□□ 2.76
CNTFR-201ENST00000351266 EFCAB2Q5VUJ9 269 aa32.26■■■□□ 2.75
CNTFR-201ENST00000351266 PLXNC1O60486 1568 aa32.25■■■□□ 2.75
CNTFR-201ENST00000351266 ARAP3Q8WWN8 1544 aa32.25■■■□□ 2.75
CNTFR-201ENST00000351266 HIRIP3Q9BW71 556 aaPredicted RBP32.25■■■□□ 2.75
CNTFR-201ENST00000351266 EIF4G2P78344 907 aaKnown RBP eCLIP32.23■■■□□ 2.75
CNTFR-201ENST00000351266 WDR7Q9Y4E6 1490 aa32.17■■■□□ 2.74
CNTFR-201ENST00000351266 HSPA5P11021 654 aaKnown RBP32.16■■■□□ 2.74
CNTFR-201ENST00000351266 ABCC1P33527 1531 aa32.16■■■□□ 2.74
CNTFR-201ENST00000351266 UNC13BO14795 1591 aa32.14■■■□□ 2.74
CNTFR-201ENST00000351266 DUOX2Q9NRD8 1548 aa32.13■■■□□ 2.73
CNTFR-201ENST00000351266 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
CNTFR-201ENST00000351266 ARHGEF12Q9NZN5 1544 aa32.13■■■□□ 2.73
CNTFR-201ENST00000351266 FAM135AQ9P2D6 1515 aa32.12■■■□□ 2.73
CNTFR-201ENST00000351266 ANP32CO43423 234 aa32.11■■■□□ 2.73
CNTFR-201ENST00000351266 NBPF8Q3BBV2 869 aa32.1■■■□□ 2.73
CNTFR-201ENST00000351266 GTF3C3Q9Y5Q9 886 aa32.1■■■□□ 2.73
CNTFR-201ENST00000351266 ERBINQ96RT1 1412 aa32.09■■■□□ 2.73
CNTFR-201ENST00000351266 CCER2I3L3R5 266 aa32.06■■■□□ 2.72
CNTFR-201ENST00000351266 ABCA9Q8IUA7 1624 aa32.04■■■□□ 2.72
CNTFR-201ENST00000351266 RTEL1-TNFRSF6BF6WH68 1400 aa32.03■■■□□ 2.72
CNTFR-201ENST00000351266 UHRF1BP1Q6BDS2 1440 aa32.01■■■□□ 2.71
CNTFR-201ENST00000351266 IQGAP3Q86VI3 1631 aa32.01■■■□□ 2.71
CNTFR-201ENST00000351266 MAGI2Q86UL8 1455 aa31.99■■■□□ 2.71
CNTFR-201ENST00000351266 TRAPPC8Q9Y2L5 1435 aa31.99■■■□□ 2.71
CNTFR-201ENST00000351266 WASHC2AQ641Q2 1341 aa31.99■■■□□ 2.71
CNTFR-201ENST00000351266 SPATA31E1Q6ZUB1 1445 aa31.98■■■□□ 2.71
CNTFR-201ENST00000351266 ASXL2Q76L83 1435 aa31.96■■■□□ 2.71
CNTFR-201ENST00000351266 SPAG9O60271 1321 aaKnown RBP31.95■■■□□ 2.71
CNTFR-201ENST00000351266 FANCAO15360 1455 aa31.95■■■□□ 2.7
CNTFR-201ENST00000351266 NPM1P06748 294 aaKnown RBP eCLIP31.92■■■□□ 2.7
CNTFR-201ENST00000351266 CCDC144AA2RUR9 1427 aa31.91■■■□□ 2.7
CNTFR-201ENST00000351266 CCDC7Q96M83 1385 aa31.91■■■□□ 2.7
CNTFR-201ENST00000351266 ZFYVE16Q7Z3T8 1539 aa31.9■■■□□ 2.7
CNTFR-201ENST00000351266 RALGAPBQ86X10 1494 aa31.9■■■□□ 2.7
CNTFR-201ENST00000351266 POLR1AO95602 1720 aaPredicted RBP31.88■■■□□ 2.69
CNTFR-201ENST00000351266 CNTLNQ9NXG0 1405 aa31.88■■■□□ 2.69
CNTFR-201ENST00000351266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.87■■■□□ 2.69
CNTFR-201ENST00000351266 ATP10AO60312 1499 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms