RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 IQSEC2Q5JU85 1478 aa26.55■■□□□ 1.84
CKLF-203ENST00000351137 PLPPR3Q6T4P5 718 aa26.55■■□□□ 1.84
CKLF-203ENST00000351137 P3H3Q8IVL6 736 aa26.55■■□□□ 1.84
CKLF-203ENST00000351137 PLEKHD1A6NEE1 506 aa26.54■■□□□ 1.84
CKLF-203ENST00000351137 PTPRTO14522 1441 aa26.54■■□□□ 1.84
CKLF-203ENST00000351137 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
CKLF-203ENST00000351137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.52■■□□□ 1.842e-6■■■■■ 51.7
CKLF-203ENST00000351137 ATP10AO60312 1499 aa26.49■■□□□ 1.83
CKLF-203ENST00000351137 UHRF1BP1Q6BDS2 1440 aa26.48■■□□□ 1.83
CKLF-203ENST00000351137 MLECQ14165 292 aa26.48■■□□□ 1.83
CKLF-203ENST00000351137 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
CKLF-203ENST00000351137 LTBP4Q8N2S1 1624 aa26.43■■□□□ 1.82
CKLF-203ENST00000351137 SCAPERQ9BY12 1400 aa26.41■■□□□ 1.82
CKLF-203ENST00000351137 PLCH2O75038 1416 aa26.39■■□□□ 1.82
CKLF-203ENST00000351137 CEBPAP49715 358 aaPredicted RBP26.37■■□□□ 1.81
CKLF-203ENST00000351137 REREQ9P2R6 1566 aa26.32■■□□□ 1.8
CKLF-203ENST00000351137 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
CKLF-203ENST00000351137 EFCAB2Q5VUJ9 269 aa26.27■■□□□ 1.8
CKLF-203ENST00000351137 NCOA1Q15788 1441 aa26.27■■□□□ 1.8
CKLF-203ENST00000351137 KDM5CP41229 1560 aa26.27■■□□□ 1.8
CKLF-203ENST00000351137 TRAPPC8Q9Y2L5 1435 aa26.26■■□□□ 1.79
CKLF-203ENST00000351137 C3P01024 1663 aa26.25■■□□□ 1.79
CKLF-203ENST00000351137 MYO5CQ9NQX4 1742 aa26.22■■□□□ 1.79
CKLF-203ENST00000351137 AGLP35573 1532 aa26.22■■□□□ 1.79
CKLF-203ENST00000351137 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
CKLF-203ENST00000351137 DIP2CQ9Y2E4 1556 aa26.19■■□□□ 1.78
CKLF-203ENST00000351137 CNTLNQ9NXG0 1405 aa26.17■■□□□ 1.78
CKLF-203ENST00000351137 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
CKLF-203ENST00000351137 CDK13Q14004 1512 aaKnown RBP26.15■■□□□ 1.78
CKLF-203ENST00000351137 NPATQ14207 1427 aa26.13■■□□□ 1.77
CKLF-203ENST00000351137 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
CKLF-203ENST00000351137 UBAP1LF5GYI3 381 aa26.1■■□□□ 1.77
CKLF-203ENST00000351137 AFAP1Q8N556 730 aa26.1■■□□□ 1.77
CKLF-203ENST00000351137 CAMSAP1Q5T5Y3 1602 aa26.1■■□□□ 1.77
CKLF-203ENST00000351137 ABCA6Q8N139 1617 aa26.09■■□□□ 1.77
CKLF-203ENST00000351137 CDK11AQ9UQ88 783 aaPredicted RBP26.08■■□□□ 1.77
CKLF-203ENST00000351137 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
CKLF-203ENST00000351137 EEA1Q15075 1411 aa26.05■■□□□ 1.76
CKLF-203ENST00000351137 PLA2R1Q13018 1463 aa26.05■■□□□ 1.76
CKLF-203ENST00000351137 ARHGAP5Q13017 1502 aa26.04■■□□□ 1.76
CKLF-203ENST00000351137 KIF14Q15058 1648 aa26.04■■□□□ 1.76
CKLF-203ENST00000351137 PKD2Q13563 968 aa26.03■■□□□ 1.76
CKLF-203ENST00000351137 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
CKLF-203ENST00000351137 MED1Q15648 1581 aaPredicted RBP26■■□□□ 1.75
CKLF-203ENST00000351137 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
CKLF-203ENST00000351137 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
CKLF-203ENST00000351137 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
CKLF-203ENST00000351137 TCOF1Q13428 1488 aaKnown RBP25.98■■□□□ 1.75
CKLF-203ENST00000351137 FMN1Q68DA7 1419 aa25.98■■□□□ 1.75
CKLF-203ENST00000351137 ZNF142P52746 1687 aaPredicted RBP25.98■■□□□ 1.75
CKLF-203ENST00000351137 CLIP1P30622 1438 aa25.96■■□□□ 1.75
CKLF-203ENST00000351137 CDC42BPBQ9Y5S2 1711 aa25.94■■□□□ 1.74
CKLF-203ENST00000351137 KIDINS220Q9ULH0 1771 aa25.94■■□□□ 1.74
CKLF-203ENST00000351137 ZMYM3Q14202 1370 aa25.94■■□□□ 1.74
CKLF-203ENST00000351137 ABCC1P33527 1531 aa25.93■■□□□ 1.74
CKLF-203ENST00000351137 NCKAP5LQ9HCH0 1330 aa25.93■■□□□ 1.74
CKLF-203ENST00000351137 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
CKLF-203ENST00000351137 PREX2Q70Z35 1606 aa25.88■■□□□ 1.73
CKLF-203ENST00000351137 MYO3AQ8NEV4 1616 aa25.88■■□□□ 1.73
CKLF-203ENST00000351137 CEP170BQ9Y4F5 1589 aaPredicted RBP25.87■■□□□ 1.73
CKLF-203ENST00000351137 HSPA1LP34931 641 aa25.87■■□□□ 1.73
CKLF-203ENST00000351137 SUPT6HQ7KZ85 1726 aaKnown RBP25.86■■□□□ 1.73
CKLF-203ENST00000351137 TOM1O60784 492 aa25.86■■□□□ 1.73
CKLF-203ENST00000351137 CPS1P31327 1500 aa25.85■■□□□ 1.73
CKLF-203ENST00000351137 PPP6R1Q9UPN7 881 aa25.85■■□□□ 1.73
CKLF-203ENST00000351137 PTPRKQ15262 1439 aa25.81■■□□□ 1.72
CKLF-203ENST00000351137 ATP1B4Q9UN42 357 aaPredicted RBP25.79■■□□□ 1.72
CKLF-203ENST00000351137 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
CKLF-203ENST00000351137 CLTCQ00610 1675 aaKnown RBP25.76■■□□□ 1.71
CKLF-203ENST00000351137 PLXNC1O60486 1568 aa25.75■■□□□ 1.71
CKLF-203ENST00000351137 ARHGAP35Q9NRY4 1499 aa25.75■■□□□ 1.71
CKLF-203ENST00000351137 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
CKLF-203ENST00000351137 A2ML1A8K2U0 1454 aa25.74■■□□□ 1.71
CKLF-203ENST00000351137 LRRIQ1Q96JM4 1722 aa25.73■■□□□ 1.71
CKLF-203ENST00000351137 SHANK2Q9UPX8 1470 aa25.72■■□□□ 1.71
CKLF-203ENST00000351137 SCAF1Q9H7N4 1312 aaKnown RBP25.72■■□□□ 1.71
CKLF-203ENST00000351137 PIP4K2BP78356 416 aa25.72■■□□□ 1.71
CKLF-203ENST00000351137 CDC42BPAQ5VT25 1732 aa25.71■■□□□ 1.71
CKLF-203ENST00000351137 DNMT1P26358 1616 aaKnown RBP25.7■■□□□ 1.71
CKLF-203ENST00000351137 POLR1AO95602 1720 aaPredicted RBP25.7■■□□□ 1.7
CKLF-203ENST00000351137 SPAG9O60271 1321 aaKnown RBP25.69■■□□□ 1.7
CKLF-203ENST00000351137 CCDC18Q5T9S5 1454 aa25.68■■□□□ 1.7
CKLF-203ENST00000351137 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
CKLF-203ENST00000351137 A2MP01023 1474 aa25.66■■□□□ 1.7
CKLF-203ENST00000351137 NEURL4Q96JN8 1562 aa25.66■■□□□ 1.7
CKLF-203ENST00000351137 KIAA1107Q9UPP5 1409 aa25.65■■□□□ 1.7
CKLF-203ENST00000351137 INO80Q9ULG1 1556 aaPredicted RBP25.64■■□□□ 1.69
CKLF-203ENST00000351137 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
CKLF-203ENST00000351137 SYCP2Q9BX26 1530 aa25.63■■□□□ 1.69
CKLF-203ENST00000351137 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
CKLF-203ENST00000351137 VWDEQ8N2E2 1590 aa25.61■■□□□ 1.69
CKLF-203ENST00000351137 CASKIN1Q8WXD9 1431 aa25.58■■□□□ 1.69
CKLF-203ENST00000351137 GGT6Q6P531 493 aa25.57■■□□□ 1.68
CKLF-203ENST00000351137 MED14O60244 1454 aa25.57■■□□□ 1.68
CKLF-203ENST00000351137 ADGBQ8N7X0 1667 aa25.57■■□□□ 1.68
CKLF-203ENST00000351137 FAM135AQ9P2D6 1515 aa25.57■■□□□ 1.68
CKLF-203ENST00000351137 GPATCH8Q9UKJ3 1502 aaKnown RBP25.55■■□□□ 1.68
CKLF-203ENST00000351137 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
CKLF-203ENST00000351137 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
CKLF-203ENST00000351137 ANKLE2Q86XL3 938 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms