RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
SMG7-201ENST00000347615 CLUAP1Q96AJ1 413 aa13.54□□□□□ -0.24
SMG7-201ENST00000347615 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
SMG7-201ENST00000347615 EXOC6Q8TAG9 804 aa13.53□□□□□ -0.24
SMG7-201ENST00000347615 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
SMG7-201ENST00000347615 ROCK2O75116 1388 aaKnown RBP13.53□□□□□ -0.24
SMG7-201ENST00000347615 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
SMG7-201ENST00000347615 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.24
SMG7-201ENST00000347615 A0A0G2JS52 829 aa13.52□□□□□ -0.24
SMG7-201ENST00000347615 PTMAP06454 111 aaKnown RBP13.51□□□□□ -0.25
SMG7-201ENST00000347615 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
SMG7-201ENST00000347615 STK26Q9P289 416 aa13.51□□□□□ -0.25
SMG7-201ENST00000347615 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■□□□□ 8.9
SMG7-201ENST00000347615 DNTTIP2Q5QJE6 756 aaKnown RBP13.5□□□□□ -0.25
SMG7-201ENST00000347615 NUP155O75694 1391 aa13.5□□□□□ -0.25
SMG7-201ENST00000347615 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
SMG7-201ENST00000347615 ERICH6BQ5W0A0 696 aa13.49□□□□□ -0.25
SMG7-201ENST00000347615 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
SMG7-201ENST00000347615 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
SMG7-201ENST00000347615 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
SMG7-201ENST00000347615 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
SMG7-201ENST00000347615 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
SMG7-201ENST00000347615 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
SMG7-201ENST00000347615 POGKQ9P215 609 aa13.48□□□□□ -0.25
SMG7-201ENST00000347615 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
SMG7-201ENST00000347615 MFAP1P55081 439 aaKnown RBP13.45□□□□□ -0.26
SMG7-201ENST00000347615 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
SMG7-201ENST00000347615 FMN1Q68DA7 1419 aa13.45□□□□□ -0.26
SMG7-201ENST00000347615 CRBNQ96SW2 442 aa13.43□□□□□ -0.26
SMG7-201ENST00000347615 TCERG1O14776 1098 aaKnown RBP13.43□□□□□ -0.26
SMG7-201ENST00000347615 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
SMG7-201ENST00000347615 PDE4AP27815 886 aa13.43□□□□□ -0.26
SMG7-201ENST00000347615 GGT6Q6P531 493 aa13.43□□□□□ -0.26
SMG7-201ENST00000347615 HSCBQ8IWL3 235 aa13.43□□□□□ -0.26
SMG7-201ENST00000347615 MLECQ14165 292 aa13.43□□□□□ -0.26
SMG7-201ENST00000347615 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
SMG7-201ENST00000347615 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■□□□ 12.3
SMG7-201ENST00000347615 PANK3Q9H999 370 aa13.41□□□□□ -0.26
SMG7-201ENST00000347615 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
SMG7-201ENST00000347615 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
SMG7-201ENST00000347615 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
SMG7-201ENST00000347615 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
SMG7-201ENST00000347615 RALBP1Q15311 655 aa13.4□□□□□ -0.26
SMG7-201ENST00000347615 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
SMG7-201ENST00000347615 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
SMG7-201ENST00000347615 KIF21BO75037 1637 aa13.38□□□□□ -0.27
SMG7-201ENST00000347615 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
SMG7-201ENST00000347615 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
SMG7-201ENST00000347615 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
SMG7-201ENST00000347615 FOXD4L5Q5VV16 416 aaPredicted RBP13.37□□□□□ -0.27
SMG7-201ENST00000347615 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
SMG7-201ENST00000347615 FOXD4L4Q8WXT5 416 aaPredicted RBP13.37□□□□□ -0.27
SMG7-201ENST00000347615 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
SMG7-201ENST00000347615 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
SMG7-201ENST00000347615 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
SMG7-201ENST00000347615 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
SMG7-201ENST00000347615 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
SMG7-201ENST00000347615 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
SMG7-201ENST00000347615 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
SMG7-201ENST00000347615 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
SMG7-201ENST00000347615 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
SMG7-201ENST00000347615 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
SMG7-201ENST00000347615 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
SMG7-201ENST00000347615 USP47Q96K76 1375 aa13.33□□□□□ -0.27
SMG7-201ENST00000347615 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
SMG7-201ENST00000347615 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
SMG7-201ENST00000347615 SMC4Q9NTJ3 1288 aa13.33□□□□□ -0.28
SMG7-201ENST00000347615 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
SMG7-201ENST00000347615 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
SMG7-201ENST00000347615 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
SMG7-201ENST00000347615 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
SMG7-201ENST00000347615 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
SMG7-201ENST00000347615 FOXD4L6Q3SYB3 417 aaPredicted RBP13.31□□□□□ -0.28
SMG7-201ENST00000347615 FOXD4L3Q6VB84 417 aaPredicted RBP13.31□□□□□ -0.28
SMG7-201ENST00000347615 SKAP1Q86WV1 359 aa13.31□□□□□ -0.28
SMG7-201ENST00000347615 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
SMG7-201ENST00000347615 APAF1O14727 1248 aa13.3□□□□□ -0.28
SMG7-201ENST00000347615 L1TD1Q5T7N2 865 aaKnown RBP13.3□□□□□ -0.28
SMG7-201ENST00000347615 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
SMG7-201ENST00000347615 KIF15Q9NS87 1388 aa13.29□□□□□ -0.28
SMG7-201ENST00000347615 AKNAQ7Z591 1439 aa13.29□□□□□ -0.28
SMG7-201ENST00000347615 CENPJQ9HC77 1338 aaPredicted RBP13.29□□□□□ -0.28
SMG7-201ENST00000347615 KIF3BO15066 747 aa13.29□□□□□ -0.28
SMG7-201ENST00000347615 KCNJ4P48050 445 aa13.29□□□□□ -0.28
SMG7-201ENST00000347615 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
SMG7-201ENST00000347615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■□□□ 12.3
SMG7-201ENST00000347615 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
SMG7-201ENST00000347615 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.28
SMG7-201ENST00000347615 IL27Q8NEV9 243 aa13.27□□□□□ -0.28
SMG7-201ENST00000347615 GOLGA6L3A6NEY3 463 aa13.27□□□□□ -0.29
SMG7-201ENST00000347615 GSE1Q14687 1217 aa13.27□□□□□ -0.29
SMG7-201ENST00000347615 CCDC7Q96M83 1385 aa13.27□□□□□ -0.29
SMG7-201ENST00000347615 MSH5O43196 834 aa13.26□□□□□ -0.29
SMG7-201ENST00000347615 IGF1RP08069 1367 aa13.26□□□□□ -0.29
SMG7-201ENST00000347615 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
SMG7-201ENST00000347615 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
SMG7-201ENST00000347615 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
SMG7-201ENST00000347615 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
SMG7-201ENST00000347615 FGD1P98174 961 aa13.24□□□□□ -0.29
SMG7-201ENST00000347615 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms