RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 GBP4Q96PP9 640 aa9.15□□□□□ -0.94
KNL1-201ENST00000346991 PHF14O94880 888 aa9.15□□□□□ -0.95
KNL1-201ENST00000346991 CTDP1Q9Y5B0 961 aaPredicted RBP9.14□□□□□ -0.95
KNL1-201ENST00000346991 SENP3Q9H4L4 574 aaPredicted RBP9.14□□□□□ -0.95
KNL1-201ENST00000346991 AMER1Q5JTC6 1135 aaPredicted RBP9.14□□□□□ -0.95
KNL1-201ENST00000346991 PLEKHD1A6NEE1 506 aa9.14□□□□□ -0.95
KNL1-201ENST00000346991 TPM1P09493 284 aa9.13□□□□□ -0.95
KNL1-201ENST00000346991 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
KNL1-201ENST00000346991 FRAT1Q92837 279 aaPredicted RBP9.12□□□□□ -0.95
KNL1-201ENST00000346991 IPO8O15397 1037 aaKnown RBP9.12□□□□□ -0.95
KNL1-201ENST00000346991 CWC22Q9HCG8 908 aaKnown RBP9.12□□□□□ -0.95
KNL1-201ENST00000346991 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
KNL1-201ENST00000346991 HSP90B1P14625 803 aaKnown RBP9.11□□□□□ -0.95
KNL1-201ENST00000346991 GPS2Q13227 327 aa9.11□□□□□ -0.95
KNL1-201ENST00000346991 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
KNL1-201ENST00000346991 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
KNL1-201ENST00000346991 TPD52L1Q16890 204 aaPredicted RBP9.11□□□□□ -0.95
KNL1-201ENST00000346991 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
KNL1-201ENST00000346991 SPAG9O60271 1321 aaKnown RBP9.1□□□□□ -0.95
KNL1-201ENST00000346991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.1□□□□□ -0.958e-7■■■■■ 117
KNL1-201ENST00000346991 HMMRO75330 724 aa9.1□□□□□ -0.95
KNL1-201ENST00000346991 NEUROD2Q15784 382 aa9.1□□□□□ -0.95
KNL1-201ENST00000346991 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
KNL1-201ENST00000346991 NOL10Q9BSC4 688 aaKnown RBP9.09□□□□□ -0.95
KNL1-201ENST00000346991 CCDC9Q9Y3X0 531 aaKnown RBP9.09□□□□□ -0.95
KNL1-201ENST00000346991 RGS3P49796 1198 aa9.09□□□□□ -0.95
KNL1-201ENST00000346991 FRAT2O75474 233 aaPredicted RBP9.09□□□□□ -0.95
KNL1-201ENST00000346991 FBXO3Q9UK99 471 aa9.08□□□□□ -0.96
KNL1-201ENST00000346991 CREBRFQ8IUR6 639 aa9.08□□□□□ -0.96
KNL1-201ENST00000346991 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
KNL1-201ENST00000346991 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
KNL1-201ENST00000346991 LRRFIP1Q32MZ4 808 aaKnown RBP9.08□□□□□ -0.96
KNL1-201ENST00000346991 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
KNL1-201ENST00000346991 ZNF330Q9Y3S2 320 aaPredicted RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 AEBP2Q6ZN18 517 aaPredicted RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 IRX6P78412 446 aaPredicted RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 RGL3Q3MIN7 710 aa9.07□□□□□ -0.96
KNL1-201ENST00000346991 AKAP17AQ02040 695 aaKnown RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
KNL1-201ENST00000346991 PES1O00541 588 aaKnown RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 CDR1P51861 262 aa9.07□□□□□ -0.96
KNL1-201ENST00000346991 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
KNL1-201ENST00000346991 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
KNL1-201ENST00000346991 CCDC43Q96MW1 224 aaKnown RBP9.06□□□□□ -0.96
KNL1-201ENST00000346991 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
KNL1-201ENST00000346991 ODF2Q5BJF6 829 aa9.06□□□□□ -0.96
KNL1-201ENST00000346991 CCDC47Q96A33 483 aaKnown RBP9.06□□□□□ -0.96
KNL1-201ENST00000346991 ANKRD20A12PQ8NF67 263 aa9.05□□□□□ -0.96
KNL1-201ENST00000346991 HDGFL2Q7Z4V5 671 aaPredicted RBP9.05□□□□□ -0.96
KNL1-201ENST00000346991 NOP58Q9Y2X3 529 aaKnown RBP9.05□□□□□ -0.96
KNL1-201ENST00000346991 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
KNL1-201ENST00000346991 R3HCC1Q9Y3T6 440 aaKnown RBP9.05□□□□□ -0.96
KNL1-201ENST00000346991 WWC2Q6AWC2 1192 aa9.04□□□□□ -0.96
KNL1-201ENST00000346991 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
KNL1-201ENST00000346991 KIF16BQ96L93 1317 aa9.04□□□□□ -0.96
KNL1-201ENST00000346991 ERCC6Q03468 1493 aa9.04□□□□□ -0.96
KNL1-201ENST00000346991 ZRSR2Q15696 482 aaKnown RBP9.04□□□□□ -0.96
KNL1-201ENST00000346991 CLIP1P30622 1438 aa9.04□□□□□ -0.96
KNL1-201ENST00000346991 HOOK1Q9UJC3 728 aaKnown RBP9.03□□□□□ -0.96
KNL1-201ENST00000346991 TMF1P82094 1093 aa9.03□□□□□ -0.96
KNL1-201ENST00000346991 SF3A1Q15459 793 aaKnown RBP9.03□□□□□ -0.96
KNL1-201ENST00000346991 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
KNL1-201ENST00000346991 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
KNL1-201ENST00000346991 CFDP1Q9UEE9 299 aaPredicted RBP9.02□□□□□ -0.97
KNL1-201ENST00000346991 MYO6Q9UM54 1294 aa9.02□□□□□ -0.97
KNL1-201ENST00000346991 CT47A1Q5JQC4 288 aaPredicted RBP9.02□□□□□ -0.97
KNL1-201ENST00000346991 PATL2C9JE40 543 aaKnown RBP9.01□□□□□ -0.97
KNL1-201ENST00000346991 CCDC180Q9P1Z9 1646 aa9.01□□□□□ -0.97
KNL1-201ENST00000346991 SYNE3Q6ZMZ3 975 aa9.01□□□□□ -0.97
KNL1-201ENST00000346991 TOMM22Q9NS69 142 aa9.01□□□□□ -0.97
KNL1-201ENST00000346991 RRP7BPQ9NSQ0 103 aa9.01□□□□□ -0.97
KNL1-201ENST00000346991 WWC1Q8IX03 1113 aa9.01□□□□□ -0.97
KNL1-201ENST00000346991 FOXD1Q16676 465 aa9.01□□□□□ -0.97
KNL1-201ENST00000346991 MORC1Q86VD1 984 aa9□□□□□ -0.97
KNL1-201ENST00000346991 EIF3AQ14152 1382 aaKnown RBP9□□□□□ -0.97
KNL1-201ENST00000346991 AK7Q96M32 723 aa9□□□□□ -0.97
KNL1-201ENST00000346991 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
KNL1-201ENST00000346991 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
KNL1-201ENST00000346991 SOX12O15370 315 aa9□□□□□ -0.97
KNL1-201ENST00000346991 GOLGA6L19H0YKK7 550 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 H3BQV1 296 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 PAF1Q8N7H5 531 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 ATP6V1DQ9Y5K8 247 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 DCTN1Q14203 1278 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 TEX35Q5T0J7 233 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 RUFY1Q96T51 708 aa8.99□□□□□ -0.97
KNL1-201ENST00000346991 CCDC173Q0VFZ6 552 aa8.98□□□□□ -0.97
KNL1-201ENST00000346991 CPLX2Q6PUV4 134 aaKnown RBP8.98□□□□□ -0.97
KNL1-201ENST00000346991 ST18O60284 1047 aa8.98□□□□□ -0.97
KNL1-201ENST00000346991 RWDD1Q9H446 243 aaPredicted RBP8.98□□□□□ -0.97
KNL1-201ENST00000346991 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
KNL1-201ENST00000346991 PCMTD1Q96MG8 357 aaPredicted RBP8.97□□□□□ -0.97
KNL1-201ENST00000346991 SUPT16HQ9Y5B9 1047 aaKnown RBP8.97□□□□□ -0.97
KNL1-201ENST00000346991 CCDC191Q8NCU4 936 aa8.97□□□□□ -0.97
KNL1-201ENST00000346991 TRIM29Q14134 588 aa8.97□□□□□ -0.97
KNL1-201ENST00000346991 SMC4Q9NTJ3 1288 aa8.97□□□□□ -0.97
KNL1-201ENST00000346991 NOM1Q5C9Z4 860 aaKnown RBP8.97□□□□□ -0.97
KNL1-201ENST00000346991 ACBD3Q9H3P7 528 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms