RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 ROCK1Q13464 1354 aa37.1■■■■□ 3.53
TRADD-201ENST00000345057 ZCCHC11Q5TAX3 1644 aaKnown RBP37.09■■■■□ 3.53
TRADD-201ENST00000345057 ACIN1Q9UKV3 1341 aaKnown RBP37.08■■■■□ 3.53
TRADD-201ENST00000345057 ABCC5O15440 1437 aa37.07■■■■□ 3.53
TRADD-201ENST00000345057 ZNF644Q9H582 1327 aaPredicted RBP37.04■■■■□ 3.52
TRADD-201ENST00000345057 RIMBP3CA6NJZ7 1639 aa37.01■■■■□ 3.52
TRADD-201ENST00000345057 RIMBP3BA6NNM3 1639 aa37.01■■■■□ 3.52
TRADD-201ENST00000345057 RIMBP3Q9UFD9 1639 aa37.01■■■■□ 3.52
TRADD-201ENST00000345057 MAPKBP1O60336 1514 aa37.01■■■■□ 3.51
TRADD-201ENST00000345057 PREX2Q70Z35 1606 aa37■■■■□ 3.51
TRADD-201ENST00000345057 CHIC2Q9UKJ5 165 aa37■■■■□ 3.51
TRADD-201ENST00000345057 ZNF777Q9ULD5 760 aaPredicted RBP36.97■■■■□ 3.51
TRADD-201ENST00000345057 RRP7BPQ9NSQ0 103 aa36.96■■■■□ 3.51
TRADD-201ENST00000345057 CROCC2H7BZ55 1655 aa36.95■■■■□ 3.51
TRADD-201ENST00000345057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.94■■■■□ 3.52e-6■■■■■ 51.7
TRADD-201ENST00000345057 ADGBQ8N7X0 1667 aa36.93■■■■□ 3.5
TRADD-201ENST00000345057 SHANK2Q9UPX8 1470 aa36.9■■■■□ 3.5
TRADD-201ENST00000345057 TTC37Q6PGP7 1564 aa36.9■■■■□ 3.5
TRADD-201ENST00000345057 ADGRL2O95490 1459 aa36.9■■■■□ 3.5
TRADD-201ENST00000345057 CDC42BPBQ9Y5S2 1711 aa36.89■■■■□ 3.5
TRADD-201ENST00000345057 MYO5CQ9NQX4 1742 aa36.88■■■■□ 3.49
TRADD-201ENST00000345057 ARHGEF5Q12774 1597 aa36.88■■■■□ 3.49
TRADD-201ENST00000345057 RSPH4AQ5TD94 716 aa36.84■■■■□ 3.49
TRADD-201ENST00000345057 ARHGAP5Q13017 1502 aa36.82■■■■□ 3.49
TRADD-201ENST00000345057 ANKRD30AQ9BXX3 1397 aa36.81■■■■□ 3.48
TRADD-201ENST00000345057 NCOA1Q15788 1441 aa36.81■■■■□ 3.48
TRADD-201ENST00000345057 CYB5RLQ6IPT4 315 aa36.81■■■■□ 3.48
TRADD-201ENST00000345057 PLEKHH2Q8IVE3 1493 aa36.81■■■■□ 3.48
TRADD-201ENST00000345057 SAMD9LQ8IVG5 1584 aa36.8■■■■□ 3.48
TRADD-201ENST00000345057 WDR7Q9Y4E6 1490 aa36.79■■■■□ 3.48
TRADD-201ENST00000345057 KCNH8Q96L42 1107 aa36.78■■■■□ 3.48
TRADD-201ENST00000345057 TIMELESSQ9UNS1 1208 aa36.77■■■■□ 3.48
TRADD-201ENST00000345057 TSPY4P0CV99 314 aa36.76■■■■□ 3.48
TRADD-201ENST00000345057 TSPY10P0CW01 314 aa36.76■■■■□ 3.48
TRADD-201ENST00000345057 PLCH2O75038 1416 aa36.75■■■■□ 3.47
TRADD-201ENST00000345057 CCDC141Q6ZP82 1450 aa36.75■■■■□ 3.47
TRADD-201ENST00000345057 MBD5Q9P267 1494 aa36.75■■■■□ 3.47
TRADD-201ENST00000345057 C9orf84Q5VXU9 1444 aa36.74■■■■□ 3.47
TRADD-201ENST00000345057 KDM6BO15054 1643 aa36.74■■■■□ 3.47
TRADD-201ENST00000345057 ARAP3Q8WWN8 1544 aa36.73■■■■□ 3.47
TRADD-201ENST00000345057 KIAA1107Q9UPP5 1409 aa36.72■■■■□ 3.47
TRADD-201ENST00000345057 NPM1P06748 294 aaKnown RBP eCLIP36.69■■■■□ 3.46
TRADD-201ENST00000345057 TRIM52Q96A61 297 aa36.69■■■■□ 3.46
TRADD-201ENST00000345057 HNRNPMP52272 730 aaKnown RBP eCLIP36.66■■■■□ 3.46
TRADD-201ENST00000345057 EFCAB2Q5VUJ9 269 aa36.66■■■■□ 3.46
TRADD-201ENST00000345057 SYCP2Q9BX26 1530 aa36.64■■■■□ 3.46
TRADD-201ENST00000345057 ZNF316A6NFI3 1004 aaPredicted RBP36.62■■■■□ 3.45
TRADD-201ENST00000345057 ASXL2Q76L83 1435 aa36.62■■■■□ 3.45
TRADD-201ENST00000345057 MAST1Q9Y2H9 1570 aa36.62■■■■□ 3.45
TRADD-201ENST00000345057 ABCA9Q8IUA7 1624 aa36.61■■■■□ 3.45
TRADD-201ENST00000345057 ANKRD50Q9ULJ7 1429 aa36.58■■■■□ 3.45
TRADD-201ENST00000345057 SIN3AQ96ST3 1273 aa36.57■■■■□ 3.44
TRADD-201ENST00000345057 MPHOSPH9Q99550 1183 aa36.57■■■■□ 3.44
TRADD-201ENST00000345057 NEUROD1Q13562 356 aa36.55■■■■□ 3.44
TRADD-201ENST00000345057 ABCC1P33527 1531 aa36.53■■■■□ 3.44
TRADD-201ENST00000345057 KIF15Q9NS87 1388 aa36.52■■■■□ 3.44
TRADD-201ENST00000345057 DENND4BO75064 1496 aaPredicted RBP36.5■■■■□ 3.43
TRADD-201ENST00000345057 TONSLQ96HA7 1378 aa36.46■■■■□ 3.43
TRADD-201ENST00000345057 PLXNC1O60486 1568 aa36.46■■■■□ 3.43
TRADD-201ENST00000345057 ARHGEF12Q9NZN5 1544 aa36.43■■■■□ 3.42
TRADD-201ENST00000345057 SLC4A1APQ9BWU0 796 aaKnown RBP36.43■■■■□ 3.42
TRADD-201ENST00000345057 FANCAO15360 1455 aa36.41■■■■□ 3.42
TRADD-201ENST00000345057 PZPP20742 1482 aa36.4■■■■□ 3.42
TRADD-201ENST00000345057 KDM5DQ9BY66 1539 aa36.39■■■■□ 3.42
TRADD-201ENST00000345057 RTEL1-TNFRSF6BF6WH68 1400 aa36.33■■■■□ 3.41
TRADD-201ENST00000345057 DUOX2Q9NRD8 1548 aa36.33■■■■□ 3.41
TRADD-201ENST00000345057 PPP1R15AO75807 674 aaPredicted RBP36.33■■■■□ 3.41
TRADD-201ENST00000345057 ANKRD30BQ9BXX2 1392 aa36.32■■■■□ 3.4
TRADD-201ENST00000345057 DIEXFQ68CQ4 756 aaKnown RBP36.32■■■■□ 3.4
TRADD-201ENST00000345057 CFAP74Q9C0B2 1584 aa36.31■■■■□ 3.4
TRADD-201ENST00000345057 TRAPPC8Q9Y2L5 1435 aa36.3■■■■□ 3.4
TRADD-201ENST00000345057 NUP155O75694 1391 aa36.29■■■■□ 3.4
TRADD-201ENST00000345057 ERBINQ96RT1 1412 aa36.27■■■■□ 3.4
TRADD-201ENST00000345057 ADGRL1O94910 1474 aa36.27■■■■□ 3.4
TRADD-201ENST00000345057 SPAG9O60271 1321 aaKnown RBP36.24■■■■□ 3.39
TRADD-201ENST00000345057 CD109Q6YHK3 1445 aa36.24■■■■□ 3.39
TRADD-201ENST00000345057 RPRD2Q5VT52 1461 aaKnown RBP36.23■■■■□ 3.39
TRADD-201ENST00000345057 UNC13BO14795 1591 aa36.22■■■■□ 3.39
TRADD-201ENST00000345057 ZFYVE16Q7Z3T8 1539 aa36.2■■■■□ 3.39
TRADD-201ENST00000345057 SCAPERQ9BY12 1400 aa36.2■■■■□ 3.38
TRADD-201ENST00000345057 FOXD1Q16676 465 aa36.19■■■■□ 3.38
TRADD-201ENST00000345057 PKD2Q13563 968 aa36.18■■■■□ 3.38
TRADD-201ENST00000345057 INO80Q9ULG1 1556 aaPredicted RBP36.15■■■■□ 3.38
TRADD-201ENST00000345057 AFAP1Q8N556 730 aa36.14■■■■□ 3.38
TRADD-201ENST00000345057 ATP7AQ04656 1500 aa36.13■■■■□ 3.37
TRADD-201ENST00000345057 FAM135AQ9P2D6 1515 aa36.13■■■■□ 3.37
TRADD-201ENST00000345057 ZNF518AQ6AHZ1 1483 aa36.1■■■■□ 3.37
TRADD-201ENST00000345057 MAGI2Q86UL8 1455 aa36.09■■■■□ 3.37
TRADD-201ENST00000345057 NEO1Q92859 1461 aa36.08■■■■□ 3.37
TRADD-201ENST00000345057 GLI2P10070 1586 aa36.07■■■■□ 3.37
TRADD-201ENST00000345057 IQGAP3Q86VI3 1631 aa36.07■■■■□ 3.37
TRADD-201ENST00000345057 TEX14Q8IWB6 1497 aa36.01■■■■□ 3.36
TRADD-201ENST00000345057 MAP3K4Q9Y6R4 1608 aa36.01■■■■□ 3.35
TRADD-201ENST00000345057 L3MBTL2Q969R5 705 aa35.99■■■■□ 3.35
TRADD-201ENST00000345057 POGZQ7Z3K3 1410 aa35.99■■■■□ 3.35
TRADD-201ENST00000345057 KDM5CP41229 1560 aa35.97■■■■□ 3.35
TRADD-201ENST00000345057 EIF2AK4Q9P2K8 1649 aaKnown RBP35.97■■■■□ 3.35
TRADD-201ENST00000345057 TRHP20396 242 aaPredicted RBP35.95■■■■□ 3.35
TRADD-201ENST00000345057 MYT1LQ9UL68 1186 aa35.95■■■■□ 3.35
TRADD-201ENST00000345057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms