RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 MAGI2Q86UL8 1455 aa30.15■■■□□ 2.42
MUC1-204ENST00000343256 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
MUC1-204ENST00000343256 CSRNP3Q8WYN3 585 aa30.13■■■□□ 2.41
MUC1-204ENST00000343256 PREX1Q8TCU6 1659 aa30.11■■■□□ 2.41
MUC1-204ENST00000343256 SCAPERQ9BY12 1400 aa30.1■■■□□ 2.41
MUC1-204ENST00000343256 ARHGEF12Q9NZN5 1544 aa30.1■■■□□ 2.41
MUC1-204ENST00000343256 STRCQ7RTU9 1775 aa30.07■■■□□ 2.4
MUC1-204ENST00000343256 ATP10AO60312 1499 aa30.05■■■□□ 2.4
MUC1-204ENST00000343256 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
MUC1-204ENST00000343256 CDK13Q14004 1512 aaKnown RBP30.02■■■□□ 2.4
MUC1-204ENST00000343256 PLCH2O75038 1416 aa30.01■■■□□ 2.39
MUC1-204ENST00000343256 DMRT2Q9Y5R5 561 aa30■■■□□ 2.39
MUC1-204ENST00000343256 SPATA31D1Q6ZQQ2 1576 aa29.98■■■□□ 2.39
MUC1-204ENST00000343256 UHRF1BP1Q6BDS2 1440 aa29.96■■■□□ 2.39
MUC1-204ENST00000343256 EFCAB2Q5VUJ9 269 aa29.89■■■□□ 2.38
MUC1-204ENST00000343256 MYO5CQ9NQX4 1742 aa29.88■■■□□ 2.37
MUC1-204ENST00000343256 SETD1BQ9UPS6 1966 aaKnown RBP29.86■■■□□ 2.37
MUC1-204ENST00000343256 AFAP1Q8N556 730 aa29.85■■■□□ 2.37
MUC1-204ENST00000343256 MYT1LQ9UL68 1186 aa29.85■■■□□ 2.37
MUC1-204ENST00000343256 PTPRTO14522 1441 aa29.85■■■□□ 2.37
MUC1-204ENST00000343256 ATP1B4Q9UN42 357 aaPredicted RBP29.84■■■□□ 2.37
MUC1-204ENST00000343256 ZNF518AQ6AHZ1 1483 aa29.82■■■□□ 2.36
MUC1-204ENST00000343256 C3P01024 1663 aa29.81■■■□□ 2.36
MUC1-204ENST00000343256 KIF14Q15058 1648 aa29.81■■■□□ 2.36
MUC1-204ENST00000343256 LTBP4Q8N2S1 1624 aa29.81■■■□□ 2.36
MUC1-204ENST00000343256 DIP2CQ9Y2E4 1556 aa29.8■■■□□ 2.36
MUC1-204ENST00000343256 KDM5CP41229 1560 aa29.79■■■□□ 2.36
MUC1-204ENST00000343256 ARHGAP5Q13017 1502 aa29.76■■■□□ 2.36
MUC1-204ENST00000343256 EEA1Q15075 1411 aa29.76■■■□□ 2.35
MUC1-204ENST00000343256 ABCA6Q8N139 1617 aa29.74■■■□□ 2.35
MUC1-204ENST00000343256 REREQ9P2R6 1566 aa29.71■■■□□ 2.35
MUC1-204ENST00000343256 ESF1Q9H501 851 aaKnown RBP29.7■■■□□ 2.35
MUC1-204ENST00000343256 TRAPPC8Q9Y2L5 1435 aa29.7■■■□□ 2.34
MUC1-204ENST00000343256 NCOA1Q15788 1441 aa29.69■■■□□ 2.34
MUC1-204ENST00000343256 IQSEC2Q5JU85 1478 aa29.68■■■□□ 2.34
MUC1-204ENST00000343256 CDK11AQ9UQ88 783 aaPredicted RBP29.68■■■□□ 2.34
MUC1-204ENST00000343256 EHMT2Q96KQ7 1210 aa29.67■■■□□ 2.34
MUC1-204ENST00000343256 TROQ12816 1431 aaPredicted RBP29.66■■■□□ 2.34
MUC1-204ENST00000343256 MLH3Q9UHC1 1453 aa29.65■■■□□ 2.34
MUC1-204ENST00000343256 FMN1Q68DA7 1419 aa29.63■■■□□ 2.33
MUC1-204ENST00000343256 AGLP35573 1532 aa29.63■■■□□ 2.33
MUC1-204ENST00000343256 CDC42BPBQ9Y5S2 1711 aa29.62■■■□□ 2.33
MUC1-204ENST00000343256 CAMSAP1Q5T5Y3 1602 aa29.6■■■□□ 2.33
MUC1-204ENST00000343256 CLIP1P30622 1438 aa29.59■■■□□ 2.33
MUC1-204ENST00000343256 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
MUC1-204ENST00000343256 ZNF335Q9H4Z2 1342 aaPredicted RBP29.57■■■□□ 2.32
MUC1-204ENST00000343256 NCKAP5LQ9HCH0 1330 aa29.57■■■□□ 2.32
MUC1-204ENST00000343256 UBAP1LF5GYI3 381 aa29.57■■■□□ 2.32
MUC1-204ENST00000343256 LRRIQ1Q96JM4 1722 aa29.57■■■□□ 2.32
MUC1-204ENST00000343256 ABCC1P33527 1531 aa29.55■■■□□ 2.32
MUC1-204ENST00000343256 CNTLNQ9NXG0 1405 aa29.55■■■□□ 2.32
MUC1-204ENST00000343256 ITSN2Q9NZM3 1697 aa29.54■■■□□ 2.32
MUC1-204ENST00000343256 KIDINS220Q9ULH0 1771 aa29.54■■■□□ 2.32
MUC1-204ENST00000343256 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
MUC1-204ENST00000343256 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
MUC1-204ENST00000343256 NPATQ14207 1427 aa29.48■■■□□ 2.31
MUC1-204ENST00000343256 ZMYM3Q14202 1370 aa29.47■■■□□ 2.31
MUC1-204ENST00000343256 MROH2AA6NES4 1674 aa29.46■■■□□ 2.31
MUC1-204ENST00000343256 SUPT6HQ7KZ85 1726 aaKnown RBP29.4■■■□□ 2.3
MUC1-204ENST00000343256 SAMD9LQ8IVG5 1584 aa29.39■■■□□ 2.3
MUC1-204ENST00000343256 MYO3AQ8NEV4 1616 aa29.39■■■□□ 2.3
MUC1-204ENST00000343256 CDC42BPAQ5VT25 1732 aa29.39■■■□□ 2.3
MUC1-204ENST00000343256 CLTCQ00610 1675 aaKnown RBP29.38■■■□□ 2.29
MUC1-204ENST00000343256 PKD2Q13563 968 aa29.37■■■□□ 2.29
MUC1-204ENST00000343256 ZNF777Q9ULD5 760 aaPredicted RBP29.37■■■□□ 2.29
MUC1-204ENST00000343256 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
MUC1-204ENST00000343256 PLA2R1Q13018 1463 aa29.36■■■□□ 2.29
MUC1-204ENST00000343256 TCOF1Q13428 1488 aaKnown RBP29.35■■■□□ 2.29
MUC1-204ENST00000343256 CEP170BQ9Y4F5 1589 aaPredicted RBP29.35■■■□□ 2.29
MUC1-204ENST00000343256 SCAF1Q9H7N4 1312 aaKnown RBP29.34■■■□□ 2.29
MUC1-204ENST00000343256 SYCP2Q9BX26 1530 aa29.32■■■□□ 2.28
MUC1-204ENST00000343256 SPAG9O60271 1321 aaKnown RBP29.32■■■□□ 2.28
MUC1-204ENST00000343256 HSPA1LP34931 641 aa29.32■■■□□ 2.28
MUC1-204ENST00000343256 MED1Q15648 1581 aaPredicted RBP29.31■■■□□ 2.28
MUC1-204ENST00000343256 PTPRKQ15262 1439 aa29.31■■■□□ 2.28
MUC1-204ENST00000343256 PPP6R1Q9UPN7 881 aa29.31■■■□□ 2.28
MUC1-204ENST00000343256 HNRNPMP52272 730 aaKnown RBP eCLIP29.3■■■□□ 2.28
MUC1-204ENST00000343256 PIP4K2BP78356 416 aa29.29■■■□□ 2.28
MUC1-204ENST00000343256 CCDC18Q5T9S5 1454 aa29.28■■■□□ 2.28
MUC1-204ENST00000343256 GGT6Q6P531 493 aa29.27■■■□□ 2.28
MUC1-204ENST00000343256 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
MUC1-204ENST00000343256 CASKIN1Q8WXD9 1431 aa29.25■■■□□ 2.27
MUC1-204ENST00000343256 A2MP01023 1474 aa29.24■■■□□ 2.27
MUC1-204ENST00000343256 PLXNC1O60486 1568 aa29.24■■■□□ 2.27
MUC1-204ENST00000343256 GPATCH8Q9UKJ3 1502 aaKnown RBP29.2■■■□□ 2.27
MUC1-204ENST00000343256 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.26
MUC1-204ENST00000343256 DNMT1P26358 1616 aaKnown RBP29.18■■■□□ 2.26
MUC1-204ENST00000343256 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
MUC1-204ENST00000343256 TOM1O60784 492 aa29.17■■■□□ 2.26
MUC1-204ENST00000343256 CPS1P31327 1500 aa29.12■■■□□ 2.25
MUC1-204ENST00000343256 NEURL4Q96JN8 1562 aa29.12■■■□□ 2.25
MUC1-204ENST00000343256 KIAA1107Q9UPP5 1409 aa29.11■■■□□ 2.25
MUC1-204ENST00000343256 POLR1AO95602 1720 aaPredicted RBP29.11■■■□□ 2.25
MUC1-204ENST00000343256 SHANK2Q9UPX8 1470 aa29.11■■■□□ 2.25
MUC1-204ENST00000343256 PHF23Q9BUL5 403 aaPredicted RBP29.11■■■□□ 2.25
MUC1-204ENST00000343256 CFDP1Q9UEE9 299 aaPredicted RBP29.11■■■□□ 2.25
MUC1-204ENST00000343256 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
MUC1-204ENST00000343256 ADGBQ8N7X0 1667 aa29.07■■■□□ 2.24
MUC1-204ENST00000343256 FYCO1Q9BQS8 1478 aa29.07■■■□□ 2.24
MUC1-204ENST00000343256 FBXO31Q5XUX0 539 aaPredicted RBP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms