RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DNTTIP2Q5QJE6 756 aaKnown RBP19.18■□□□□ 0.66
UBE3B-202ENST00000342494 EID1Q9Y6B2 187 aa19.17■□□□□ 0.66
UBE3B-202ENST00000342494 PPP4R2Q9NY27 417 aa19.17■□□□□ 0.66
UBE3B-202ENST00000342494 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
UBE3B-202ENST00000342494 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
UBE3B-202ENST00000342494 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
UBE3B-202ENST00000342494 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
UBE3B-202ENST00000342494 TMX4Q9H1E5 349 aaPredicted RBP19.16■□□□□ 0.66
UBE3B-202ENST00000342494 SOGA1O94964 1423 aa19.16■□□□□ 0.66
UBE3B-202ENST00000342494 KIF3BO15066 747 aa19.16■□□□□ 0.66
UBE3B-202ENST00000342494 GOLGA6L4A6NEF3 574 aa19.15■□□□□ 0.66
UBE3B-202ENST00000342494 MCCP23508 829 aa19.14■□□□□ 0.66
UBE3B-202ENST00000342494 CLSTN1O94985 981 aa19.14■□□□□ 0.65
UBE3B-202ENST00000342494 GOLGA6L6A8MZA4 724 aa19.14■□□□□ 0.65
UBE3B-202ENST00000342494 TIMELESSQ9UNS1 1208 aa19.14■□□□□ 0.65
UBE3B-202ENST00000342494 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
UBE3B-202ENST00000342494 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
UBE3B-202ENST00000342494 FOXD1Q16676 465 aa19.13■□□□□ 0.65
UBE3B-202ENST00000342494 NUP155O75694 1391 aa19.13■□□□□ 0.65
UBE3B-202ENST00000342494 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
UBE3B-202ENST00000342494 IPO8O15397 1037 aaKnown RBP19.11■□□□□ 0.65
UBE3B-202ENST00000342494 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
UBE3B-202ENST00000342494 APBB1O00213 710 aa19.1■□□□□ 0.65
UBE3B-202ENST00000342494 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
UBE3B-202ENST00000342494 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
UBE3B-202ENST00000342494 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
UBE3B-202ENST00000342494 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
UBE3B-202ENST00000342494 NRDCO43847 1150 aa19.09■□□□□ 0.65
UBE3B-202ENST00000342494 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.64
UBE3B-202ENST00000342494 NGDNQ8NEJ9 315 aaKnown RBP19.08■□□□□ 0.64
UBE3B-202ENST00000342494 CHMP4AQ9BY43 222 aa19.08■□□□□ 0.64
UBE3B-202ENST00000342494 HSCBQ8IWL3 235 aa19.07■□□□□ 0.64
UBE3B-202ENST00000342494 CFAP44Q96MT7 982 aa19.06■□□□□ 0.64
UBE3B-202ENST00000342494 GNL2Q13823 731 aaKnown RBP19.06■□□□□ 0.64
UBE3B-202ENST00000342494 SPAG9O60271 1321 aaKnown RBP19.06■□□□□ 0.64
UBE3B-202ENST00000342494 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
UBE3B-202ENST00000342494 KIAA1211Q6ZU35 1233 aa19.05■□□□□ 0.64
UBE3B-202ENST00000342494 TERF2IPQ9NYB0 399 aa19.05■□□□□ 0.64
UBE3B-202ENST00000342494 EIF3AQ14152 1382 aaKnown RBP19.04■□□□□ 0.64
UBE3B-202ENST00000342494 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
UBE3B-202ENST00000342494 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.64
UBE3B-202ENST00000342494 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
UBE3B-202ENST00000342494 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
UBE3B-202ENST00000342494 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
UBE3B-202ENST00000342494 B4GALNT3Q6L9W6 998 aa19.03■□□□□ 0.64
UBE3B-202ENST00000342494 GORABQ5T7V8 394 aa19.02■□□□□ 0.64
UBE3B-202ENST00000342494 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
UBE3B-202ENST00000342494 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
UBE3B-202ENST00000342494 SMARCA2P51531 1590 aa19■□□□□ 0.63
UBE3B-202ENST00000342494 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
UBE3B-202ENST00000342494 AMPHP49418 695 aa18.99■□□□□ 0.63
UBE3B-202ENST00000342494 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
UBE3B-202ENST00000342494 ITPRIPQ8IWB1 547 aa18.99■□□□□ 0.63
UBE3B-202ENST00000342494 G3V3G9 751 aa18.99■□□□□ 0.63
UBE3B-202ENST00000342494 DCAF8Q5TAQ9 597 aa18.99■□□□□ 0.63
UBE3B-202ENST00000342494 NUTM2FA1L443 756 aa18.98■□□□□ 0.63
UBE3B-202ENST00000342494 RSPH4AQ5TD94 716 aa18.98■□□□□ 0.63
UBE3B-202ENST00000342494 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
UBE3B-202ENST00000342494 LTV1Q96GA3 475 aaPredicted RBP18.96■□□□□ 0.63
UBE3B-202ENST00000342494 HDAC5Q9UQL6 1122 aa18.96■□□□□ 0.63
UBE3B-202ENST00000342494 RALBP1Q15311 655 aa18.96■□□□□ 0.63
UBE3B-202ENST00000342494 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
UBE3B-202ENST00000342494 GTF2E1P29083 439 aaPredicted RBP18.94■□□□□ 0.62
UBE3B-202ENST00000342494 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
UBE3B-202ENST00000342494 ERICH6BQ5W0A0 696 aa18.93■□□□□ 0.62
UBE3B-202ENST00000342494 SPRYD3Q8NCJ5 442 aa18.93■□□□□ 0.62
UBE3B-202ENST00000342494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
UBE3B-202ENST00000342494 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
UBE3B-202ENST00000342494 GPATCH3Q96I76 525 aa18.91■□□□□ 0.62
UBE3B-202ENST00000342494 NOP58Q9Y2X3 529 aaKnown RBP18.91■□□□□ 0.62
UBE3B-202ENST00000342494 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
UBE3B-202ENST00000342494 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
UBE3B-202ENST00000342494 SMC4Q9NTJ3 1288 aa18.89■□□□□ 0.61
UBE3B-202ENST00000342494 LMOD3Q0VAK6 560 aa18.89■□□□□ 0.61
UBE3B-202ENST00000342494 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
UBE3B-202ENST00000342494 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
UBE3B-202ENST00000342494 HMMRO75330 724 aa18.88■□□□□ 0.61
UBE3B-202ENST00000342494 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
UBE3B-202ENST00000342494 FRAT2O75474 233 aaPredicted RBP18.87■□□□□ 0.61
UBE3B-202ENST00000342494 RCAN3Q9UKA8 241 aa18.87■□□□□ 0.61
UBE3B-202ENST00000342494 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
UBE3B-202ENST00000342494 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
UBE3B-202ENST00000342494 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
UBE3B-202ENST00000342494 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
UBE3B-202ENST00000342494 TRIM6-TRIM34B2RNG4 842 aa18.84■□□□□ 0.61
UBE3B-202ENST00000342494 EVA1CP58658 441 aa18.84■□□□□ 0.61
UBE3B-202ENST00000342494 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-202ENST00000342494 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
UBE3B-202ENST00000342494 CHAF1AQ13111 956 aaPredicted RBP18.83■□□□□ 0.61
UBE3B-202ENST00000342494 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
UBE3B-202ENST00000342494 L1TD1Q5T7N2 865 aaKnown RBP18.83■□□□□ 0.6
UBE3B-202ENST00000342494 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
UBE3B-202ENST00000342494 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
UBE3B-202ENST00000342494 RAPGEF2Q9Y4G8 1499 aa18.81■□□□□ 0.6
UBE3B-202ENST00000342494 HSP90B1P14625 803 aaKnown RBP18.8■□□□□ 0.6
UBE3B-202ENST00000342494 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
UBE3B-202ENST00000342494 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
UBE3B-202ENST00000342494 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
UBE3B-202ENST00000342494 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
UBE3B-202ENST00000342494 MSH5O43196 834 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms