RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 GGT6Q6P531 493 aa19.37■□□□□ 0.69
COL11A2-201ENST00000341947 NACADO15069 1562 aa19.37■□□□□ 0.69
COL11A2-201ENST00000341947 CSB-PGBD3P0DP91 1061 aa19.36■□□□□ 0.69
COL11A2-201ENST00000341947 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
COL11A2-201ENST00000341947 CHAF1AQ13111 956 aaPredicted RBP19.36■□□□□ 0.69
COL11A2-201ENST00000341947 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
COL11A2-201ENST00000341947 IPO8O15397 1037 aaKnown RBP19.34■□□□□ 0.69
COL11A2-201ENST00000341947 CALD1Q05682 793 aaKnown RBP19.33■□□□□ 0.69
COL11A2-201ENST00000341947 KIAA1211Q6ZU35 1233 aa19.33■□□□□ 0.68
COL11A2-201ENST00000341947 DRC7Q8IY82 874 aa19.33■□□□□ 0.68
COL11A2-201ENST00000341947 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
COL11A2-201ENST00000341947 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
COL11A2-201ENST00000341947 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
COL11A2-201ENST00000341947 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
COL11A2-201ENST00000341947 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
COL11A2-201ENST00000341947 ZNF330Q9Y3S2 320 aaPredicted RBP19.31■□□□□ 0.68
COL11A2-201ENST00000341947 CUX2O14529 1486 aa19.3■□□□□ 0.68
COL11A2-201ENST00000341947 APBB1O00213 710 aa19.29■□□□□ 0.68
COL11A2-201ENST00000341947 TIMELESSQ9UNS1 1208 aa19.27■□□□□ 0.68
COL11A2-201ENST00000341947 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
COL11A2-201ENST00000341947 SPRYD3Q8NCJ5 442 aa19.27■□□□□ 0.68
COL11A2-201ENST00000341947 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.67
COL11A2-201ENST00000341947 MSNP26038 577 aaKnown RBP19.26■□□□□ 0.67
COL11A2-201ENST00000341947 PKD2Q13563 968 aa19.26■□□□□ 0.67
COL11A2-201ENST00000341947 CARMIL2Q6F5E8 1435 aa19.26■□□□□ 0.67
COL11A2-201ENST00000341947 KIAA2012Q0VF49 1180 aa19.26■□□□□ 0.67
COL11A2-201ENST00000341947 CHMP4AQ9BY43 222 aa19.25■□□□□ 0.67
COL11A2-201ENST00000341947 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
COL11A2-201ENST00000341947 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
COL11A2-201ENST00000341947 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL11A2-201ENST00000341947 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
COL11A2-201ENST00000341947 ROCK2O75116 1388 aaKnown RBP19.23■□□□□ 0.67
COL11A2-201ENST00000341947 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
COL11A2-201ENST00000341947 SETD5Q9C0A6 1442 aa19.22■□□□□ 0.67
COL11A2-201ENST00000341947 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
COL11A2-201ENST00000341947 GORABQ5T7V8 394 aa19.21■□□□□ 0.67
COL11A2-201ENST00000341947 RTN4Q9NQC3 1192 aaKnown RBP19.21■□□□□ 0.67
COL11A2-201ENST00000341947 HTATSF1O43719 755 aaKnown RBP19.21■□□□□ 0.67
COL11A2-201ENST00000341947 EIF3AQ14152 1382 aaKnown RBP19.21■□□□□ 0.67
COL11A2-201ENST00000341947 CCER2I3L3R5 266 aa19.21■□□□□ 0.67
COL11A2-201ENST00000341947 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
COL11A2-201ENST00000341947 STK31Q9BXU1 1019 aa19.2■□□□□ 0.66
COL11A2-201ENST00000341947 RWDD1Q9H446 243 aaPredicted RBP19.2■□□□□ 0.66
COL11A2-201ENST00000341947 PTMSP20962 102 aa19.19■□□□□ 0.66
COL11A2-201ENST00000341947 TAF7LQ5H9L4 462 aa19.19■□□□□ 0.66
COL11A2-201ENST00000341947 GPATCH3Q96I76 525 aa19.19■□□□□ 0.66
COL11A2-201ENST00000341947 CHMP3Q9Y3E7 222 aa19.18■□□□□ 0.66
COL11A2-201ENST00000341947 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
COL11A2-201ENST00000341947 GBP4Q96PP9 640 aa19.17■□□□□ 0.66
COL11A2-201ENST00000341947 HDAC5Q9UQL6 1122 aa19.16■□□□□ 0.66
COL11A2-201ENST00000341947 RALBP1Q15311 655 aa19.16■□□□□ 0.66
COL11A2-201ENST00000341947 EID1Q9Y6B2 187 aa19.15■□□□□ 0.66
COL11A2-201ENST00000341947 G3V3G9 751 aa19.14■□□□□ 0.66
COL11A2-201ENST00000341947 DCAF8Q5TAQ9 597 aa19.14■□□□□ 0.66
COL11A2-201ENST00000341947 FOXD1Q16676 465 aa19.13■□□□□ 0.65
COL11A2-201ENST00000341947 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
COL11A2-201ENST00000341947 ANKRD30AQ9BXX3 1397 aa19.13■□□□□ 0.65
COL11A2-201ENST00000341947 NUP155O75694 1391 aa19.13■□□□□ 0.65
COL11A2-201ENST00000341947 TPM4P67936 248 aa19.12■□□□□ 0.65
COL11A2-201ENST00000341947 HSP90B1P14625 803 aaKnown RBP19.12■□□□□ 0.65
COL11A2-201ENST00000341947 NOC3LQ8WTT2 800 aaKnown RBP19.11■□□□□ 0.65
COL11A2-201ENST00000341947 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
COL11A2-201ENST00000341947 HMMRO75330 724 aa19.11■□□□□ 0.65
COL11A2-201ENST00000341947 PMFBP1Q8TBY8 1022 aa19.11■□□□□ 0.65
COL11A2-201ENST00000341947 CCDC34Q96HJ3 373 aa19.1■□□□□ 0.65
COL11A2-201ENST00000341947 SYAP1Q96A49 352 aaPredicted RBP19.1■□□□□ 0.65
COL11A2-201ENST00000341947 NGDNQ8NEJ9 315 aaKnown RBP19.09■□□□□ 0.65
COL11A2-201ENST00000341947 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.65
COL11A2-201ENST00000341947 TRIM6-TRIM34B2RNG4 842 aa19.08■□□□□ 0.65
COL11A2-201ENST00000341947 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
COL11A2-201ENST00000341947 KIF3BO15066 747 aa19.07■□□□□ 0.64
COL11A2-201ENST00000341947 LMOD3Q0VAK6 560 aa19.06■□□□□ 0.64
COL11A2-201ENST00000341947 AMPHP49418 695 aa19.06■□□□□ 0.64
COL11A2-201ENST00000341947 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
COL11A2-201ENST00000341947 RASSF8Q8NHQ8 419 aa19.05■□□□□ 0.64
COL11A2-201ENST00000341947 SOGA1O94964 1423 aa19.05■□□□□ 0.64
COL11A2-201ENST00000341947 SLC4A10Q6U841 1118 aa19.04■□□□□ 0.64
COL11A2-201ENST00000341947 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
COL11A2-201ENST00000341947 CSPP1Q1MSJ5 1256 aa19.03■□□□□ 0.64
COL11A2-201ENST00000341947 VPS8Q8N3P4 1428 aa19.03■□□□□ 0.64
COL11A2-201ENST00000341947 MFAP1P55081 439 aaKnown RBP19.02■□□□□ 0.64
COL11A2-201ENST00000341947 PRM3Q9NNZ6 103 aa19.02■□□□□ 0.64
COL11A2-201ENST00000341947 GTF2E1P29083 439 aaPredicted RBP19.02■□□□□ 0.63
COL11A2-201ENST00000341947 WASHC2CQ9Y4E1 1318 aa19.02■□□□□ 0.63
COL11A2-201ENST00000341947 FRAT2O75474 233 aaPredicted RBP19.01■□□□□ 0.63
COL11A2-201ENST00000341947 TCERG1O14776 1098 aaKnown RBP19■□□□□ 0.63
COL11A2-201ENST00000341947 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
COL11A2-201ENST00000341947 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
COL11A2-201ENST00000341947 SLKQ9H2G2 1235 aaPredicted RBP18.99■□□□□ 0.63
COL11A2-201ENST00000341947 TOMM22Q9NS69 142 aa18.99■□□□□ 0.63
COL11A2-201ENST00000341947 GZF1Q9H116 711 aaPredicted RBP18.98■□□□□ 0.63
COL11A2-201ENST00000341947 HNRNPMP52272 730 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL11A2-201ENST00000341947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL11A2-201ENST00000341947 CCDC146Q8IYE0 955 aa18.97■□□□□ 0.63
COL11A2-201ENST00000341947 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
COL11A2-201ENST00000341947 MARCH6O60337 910 aa18.96■□□□□ 0.63
COL11A2-201ENST00000341947 VPS53Q5VIR6 699 aa18.96■□□□□ 0.63
COL11A2-201ENST00000341947 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
COL11A2-201ENST00000341947 RAB3GAP2Q9H2M9 1393 aa18.95■□□□□ 0.62
COL11A2-201ENST00000341947 DEKP35659 375 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms