RNA–Protein interactions for RNA: ENST00000341084.6

RNF19A-201, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF19A, Length 4,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-201ENST00000341084 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
RNF19A-201ENST00000341084 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
RNF19A-201ENST00000341084 SPAG9O60271 1321 aaKnown RBP22.4■■□□□ 1.18
RNF19A-201ENST00000341084 NUP155O75694 1391 aa22.4■■□□□ 1.18
RNF19A-201ENST00000341084 IGF1RP08069 1367 aa22.39■■□□□ 1.18
RNF19A-201ENST00000341084 PHLDB1Q86UU1 1377 aa22.39■■□□□ 1.17
RNF19A-201ENST00000341084 RRBP1Q9P2E9 1410 aaKnown RBP22.39■■□□□ 1.17
RNF19A-201ENST00000341084 NEUROD2Q15784 382 aa22.38■■□□□ 1.17
RNF19A-201ENST00000341084 ARXQ96QS3 562 aa22.36■■□□□ 1.17
RNF19A-201ENST00000341084 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
RNF19A-201ENST00000341084 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
RNF19A-201ENST00000341084 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
RNF19A-201ENST00000341084 CDCA8Q53HL2 280 aa22.34■■□□□ 1.17
RNF19A-201ENST00000341084 L3MBTL2Q969R5 705 aa22.34■■□□□ 1.17
RNF19A-201ENST00000341084 SRPK2P78362 688 aaKnown RBP22.34■■□□□ 1.17
RNF19A-201ENST00000341084 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.16
RNF19A-201ENST00000341084 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
RNF19A-201ENST00000341084 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
RNF19A-201ENST00000341084 HDGFP51858 240 aaKnown RBP22.3■■□□□ 1.16
RNF19A-201ENST00000341084 CC2D1BQ5T0F9 858 aaKnown RBP22.3■■□□□ 1.16
RNF19A-201ENST00000341084 PRKRIP1Q9H875 184 aaPredicted RBP22.3■■□□□ 1.16
RNF19A-201ENST00000341084 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
RNF19A-201ENST00000341084 IPO9Q96P70 1041 aaKnown RBP22.28■■□□□ 1.16
RNF19A-201ENST00000341084 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.27■■□□□ 1.16
RNF19A-201ENST00000341084 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
RNF19A-201ENST00000341084 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
RNF19A-201ENST00000341084 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
RNF19A-201ENST00000341084 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
RNF19A-201ENST00000341084 NUTM2FA1L443 756 aa22.23■■□□□ 1.15
RNF19A-201ENST00000341084 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
RNF19A-201ENST00000341084 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
RNF19A-201ENST00000341084 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
RNF19A-201ENST00000341084 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
RNF19A-201ENST00000341084 TMF1P82094 1093 aa22.18■■□□□ 1.14
RNF19A-201ENST00000341084 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
RNF19A-201ENST00000341084 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
RNF19A-201ENST00000341084 ZNF644Q9H582 1327 aaPredicted RBP22.17■■□□□ 1.14
RNF19A-201ENST00000341084 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
RNF19A-201ENST00000341084 RGS3P49796 1198 aa22.15■■□□□ 1.14
RNF19A-201ENST00000341084 RSPH4AQ5TD94 716 aa22.15■■□□□ 1.14
RNF19A-201ENST00000341084 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
RNF19A-201ENST00000341084 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.11■■□□□ 1.13
RNF19A-201ENST00000341084 CFTRP13569 1480 aa22.11■■□□□ 1.13
RNF19A-201ENST00000341084 RCAN3Q9UKA8 241 aa22.09■■□□□ 1.13
RNF19A-201ENST00000341084 MAPK8IP3Q9UPT6 1336 aa22.08■■□□□ 1.12
RNF19A-201ENST00000341084 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.12
RNF19A-201ENST00000341084 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
RNF19A-201ENST00000341084 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
RNF19A-201ENST00000341084 AFAP1Q8N556 730 aa22.06■■□□□ 1.12
RNF19A-201ENST00000341084 SLC4A3P48751 1232 aa22.05■■□□□ 1.12
RNF19A-201ENST00000341084 TRAK1Q9UPV9 953 aa22.05■■□□□ 1.12
RNF19A-201ENST00000341084 ANO8Q9HCE9 1232 aaPredicted RBP22.03■■□□□ 1.12
RNF19A-201ENST00000341084 MORC1Q86VD1 984 aa22.03■■□□□ 1.12
RNF19A-201ENST00000341084 FGD6Q6ZV73 1430 aa22.02■■□□□ 1.12
RNF19A-201ENST00000341084 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
RNF19A-201ENST00000341084 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.12
RNF19A-201ENST00000341084 AKNAQ7Z591 1439 aa22.02■■□□□ 1.11
RNF19A-201ENST00000341084 PLIN1O60240 522 aa22.01■■□□□ 1.11
RNF19A-201ENST00000341084 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
RNF19A-201ENST00000341084 UACAQ9BZF9 1416 aa22.01■■□□□ 1.11
RNF19A-201ENST00000341084 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
RNF19A-201ENST00000341084 PDE4AP27815 886 aa22■■□□□ 1.11
RNF19A-201ENST00000341084 IL27Q8NEV9 243 aa22■■□□□ 1.11
RNF19A-201ENST00000341084 GRIN2BQ13224 1484 aa22■■□□□ 1.11
RNF19A-201ENST00000341084 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
RNF19A-201ENST00000341084 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
RNF19A-201ENST00000341084 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
RNF19A-201ENST00000341084 PRG4Q92954 1404 aaPredicted RBP21.96■■□□□ 1.11
RNF19A-201ENST00000341084 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
RNF19A-201ENST00000341084 UPF2Q9HAU5 1272 aaKnown RBP21.96■■□□□ 1.11
RNF19A-201ENST00000341084 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.1
RNF19A-201ENST00000341084 HSP90AA1P07900 732 aaKnown RBP21.94■■□□□ 1.1
RNF19A-201ENST00000341084 HDGFL2Q7Z4V5 671 aaPredicted RBP21.94■■□□□ 1.1
RNF19A-201ENST00000341084 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
RNF19A-201ENST00000341084 NGDNQ8NEJ9 315 aaKnown RBP21.93■■□□□ 1.1
RNF19A-201ENST00000341084 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
RNF19A-201ENST00000341084 MYH16Q9H6N6 1097 aa21.92■■□□□ 1.1
RNF19A-201ENST00000341084 CSB-PGBD3P0DP91 1061 aa21.92■■□□□ 1.1
RNF19A-201ENST00000341084 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
RNF19A-201ENST00000341084 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
RNF19A-201ENST00000341084 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
RNF19A-201ENST00000341084 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
RNF19A-201ENST00000341084 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
RNF19A-201ENST00000341084 CUX1P39880 1505 aa21.89■■□□□ 1.09
RNF19A-201ENST00000341084 ST20-MTHFSA0A0A6YYL1 179 aa21.88■■□□□ 1.09
RNF19A-201ENST00000341084 NPHP1O15259 732 aa21.88■■□□□ 1.09
RNF19A-201ENST00000341084 CCDC9Q9Y3X0 531 aaKnown RBP21.87■■□□□ 1.09
RNF19A-201ENST00000341084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.092e-7■■□□□ 14.2
RNF19A-201ENST00000341084 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
RNF19A-201ENST00000341084 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.093e-8■■■■■ 28.3
RNF19A-201ENST00000341084 FTSJ3Q8IY81 847 aaKnown RBP21.84■■□□□ 1.09
RNF19A-201ENST00000341084 RAPGEF3O95398 923 aa21.84■■□□□ 1.09
RNF19A-201ENST00000341084 LTV1Q96GA3 475 aaPredicted RBP21.84■■□□□ 1.09
RNF19A-201ENST00000341084 USP47Q96K76 1375 aa21.84■■□□□ 1.09
RNF19A-201ENST00000341084 SLKQ9H2G2 1235 aaPredicted RBP21.82■■□□□ 1.08
RNF19A-201ENST00000341084 CRBNQ96SW2 442 aa21.82■■□□□ 1.08
RNF19A-201ENST00000341084 BECN1Q14457 450 aa21.81■■□□□ 1.08
RNF19A-201ENST00000341084 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
RNF19A-201ENST00000341084 SPRYD3Q8NCJ5 442 aa21.81■■□□□ 1.08
RNF19A-201ENST00000341084 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms