RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PREX1Q8TCU6 1659 aa27.78■■■□□ 2.04
NECTIN1-202ENST00000340882 ARHGEF12Q9NZN5 1544 aa27.78■■■□□ 2.04
NECTIN1-202ENST00000340882 SCAPERQ9BY12 1400 aa27.78■■■□□ 2.04
NECTIN1-202ENST00000340882 STRCQ7RTU9 1775 aa27.77■■■□□ 2.04
NECTIN1-202ENST00000340882 ILDR2Q71H61 639 aa27.76■■■□□ 2.03
NECTIN1-202ENST00000340882 CEBPAP49715 358 aaPredicted RBP27.75■■■□□ 2.03
NECTIN1-202ENST00000340882 PLCH2O75038 1416 aa27.74■■■□□ 2.03
NECTIN1-202ENST00000340882 ATP10AO60312 1499 aa27.72■■■□□ 2.03
NECTIN1-202ENST00000340882 C9orf84Q5VXU9 1444 aa27.68■■■□□ 2.02
NECTIN1-202ENST00000340882 MYO5CQ9NQX4 1742 aa27.67■■■□□ 2.02
NECTIN1-202ENST00000340882 DISP3Q9P2K9 1392 aa27.67■■■□□ 2.02
NECTIN1-202ENST00000340882 SETD1BQ9UPS6 1966 aaKnown RBP27.61■■■□□ 2.01
NECTIN1-202ENST00000340882 KIF14Q15058 1648 aa27.61■■■□□ 2.01
NECTIN1-202ENST00000340882 EEA1Q15075 1411 aa27.6■■■□□ 2.01
NECTIN1-202ENST00000340882 SOCS7O14512 581 aa27.58■■■□□ 2.01
NECTIN1-202ENST00000340882 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
NECTIN1-202ENST00000340882 AFAP1Q8N556 730 aa27.56■■■□□ 2
NECTIN1-202ENST00000340882 UHRF1BP1Q6BDS2 1440 aa27.56■■■□□ 2
NECTIN1-202ENST00000340882 KDM5CP41229 1560 aa27.56■■■□□ 2
NECTIN1-202ENST00000340882 C3P01024 1663 aa27.56■■■□□ 2
NECTIN1-202ENST00000340882 DIP2CQ9Y2E4 1556 aa27.55■■■□□ 2
NECTIN1-202ENST00000340882 DMRT2Q9Y5R5 561 aa27.54■■■□□ 2
NECTIN1-202ENST00000340882 ZNF518AQ6AHZ1 1483 aa27.53■■■□□ 2
NECTIN1-202ENST00000340882 ATP1B4Q9UN42 357 aaPredicted RBP27.53■■■□□ 2
NECTIN1-202ENST00000340882 ABCA6Q8N139 1617 aa27.51■■□□□ 1.99
NECTIN1-202ENST00000340882 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
NECTIN1-202ENST00000340882 SPATA31D1Q6ZQQ2 1576 aa27.49■■□□□ 1.99
NECTIN1-202ENST00000340882 ARHGAP5Q13017 1502 aa27.49■■□□□ 1.99
NECTIN1-202ENST00000340882 CDC42BPBQ9Y5S2 1711 aa27.48■■□□□ 1.99
NECTIN1-202ENST00000340882 PTPRTO14522 1441 aa27.48■■□□□ 1.99
NECTIN1-202ENST00000340882 LTBP4Q8N2S1 1624 aa27.48■■□□□ 1.99
NECTIN1-202ENST00000340882 REREQ9P2R6 1566 aa27.47■■□□□ 1.99
NECTIN1-202ENST00000340882 EHMT2Q96KQ7 1210 aa27.44■■□□□ 1.98
NECTIN1-202ENST00000340882 MYT1LQ9UL68 1186 aa27.44■■□□□ 1.98
NECTIN1-202ENST00000340882 ARHGAP35Q9NRY4 1499 aa27.44■■□□□ 1.98
NECTIN1-202ENST00000340882 TROQ12816 1431 aaPredicted RBP27.43■■□□□ 1.98
NECTIN1-202ENST00000340882 FMN1Q68DA7 1419 aa27.42■■□□□ 1.98
NECTIN1-202ENST00000340882 MLH3Q9UHC1 1453 aa27.4■■□□□ 1.98
NECTIN1-202ENST00000340882 CDK11AQ9UQ88 783 aaPredicted RBP27.4■■□□□ 1.98
NECTIN1-202ENST00000340882 TRAPPC8Q9Y2L5 1435 aa27.39■■□□□ 1.97
NECTIN1-202ENST00000340882 AGLP35573 1532 aa27.38■■□□□ 1.97
NECTIN1-202ENST00000340882 ITSN2Q9NZM3 1697 aa27.36■■□□□ 1.97
NECTIN1-202ENST00000340882 KIDINS220Q9ULH0 1771 aa27.36■■□□□ 1.97
NECTIN1-202ENST00000340882 NCOA1Q15788 1441 aa27.35■■□□□ 1.97
NECTIN1-202ENST00000340882 ABCC1P33527 1531 aa27.35■■□□□ 1.97
NECTIN1-202ENST00000340882 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
NECTIN1-202ENST00000340882 UBTFP17480 764 aaKnown RBP27.33■■□□□ 1.97
NECTIN1-202ENST00000340882 CLIP1P30622 1438 aa27.33■■□□□ 1.96
NECTIN1-202ENST00000340882 IQSEC2Q5JU85 1478 aa27.31■■□□□ 1.96
NECTIN1-202ENST00000340882 ESF1Q9H501 851 aaKnown RBP27.29■■□□□ 1.96
NECTIN1-202ENST00000340882 CAMSAP1Q5T5Y3 1602 aa27.29■■□□□ 1.96
NECTIN1-202ENST00000340882 CDC42BPAQ5VT25 1732 aa27.27■■□□□ 1.96
NECTIN1-202ENST00000340882 MROH2AA6NES4 1674 aa27.24■■□□□ 1.95
NECTIN1-202ENST00000340882 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
NECTIN1-202ENST00000340882 NCKAP5LQ9HCH0 1330 aa27.22■■□□□ 1.95
NECTIN1-202ENST00000340882 SUPT6HQ7KZ85 1726 aaKnown RBP27.21■■□□□ 1.95
NECTIN1-202ENST00000340882 ZNF335Q9H4Z2 1342 aaPredicted RBP27.2■■□□□ 1.95
NECTIN1-202ENST00000340882 SAMD9LQ8IVG5 1584 aa27.2■■□□□ 1.94
NECTIN1-202ENST00000340882 NPATQ14207 1427 aa27.19■■□□□ 1.94
NECTIN1-202ENST00000340882 ZMYM3Q14202 1370 aa27.18■■□□□ 1.94
NECTIN1-202ENST00000340882 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
NECTIN1-202ENST00000340882 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.94
NECTIN1-202ENST00000340882 ZNF142P52746 1687 aaPredicted RBP27.14■■□□□ 1.93
NECTIN1-202ENST00000340882 UBAP1LF5GYI3 381 aa27.13■■□□□ 1.93
NECTIN1-202ENST00000340882 SYCP2Q9BX26 1530 aa27.12■■□□□ 1.93
NECTIN1-202ENST00000340882 CASKIN1Q8WXD9 1431 aa27.11■■□□□ 1.93
NECTIN1-202ENST00000340882 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
NECTIN1-202ENST00000340882 ZNF777Q9ULD5 760 aaPredicted RBP27.1■■□□□ 1.93
NECTIN1-202ENST00000340882 HNRNPMP52272 730 aaKnown RBP eCLIP27.08■■□□□ 1.93
NECTIN1-202ENST00000340882 CEP170BQ9Y4F5 1589 aaPredicted RBP27.08■■□□□ 1.93
NECTIN1-202ENST00000340882 TCOF1Q13428 1488 aaKnown RBP27.07■■□□□ 1.92
NECTIN1-202ENST00000340882 PLXNC1O60486 1568 aa27.07■■□□□ 1.92
NECTIN1-202ENST00000340882 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
NECTIN1-202ENST00000340882 PLA2R1Q13018 1463 aa27.06■■□□□ 1.92
NECTIN1-202ENST00000340882 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
NECTIN1-202ENST00000340882 ATP7AQ04656 1500 aa27.06■■□□□ 1.92
NECTIN1-202ENST00000340882 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
NECTIN1-202ENST00000340882 INO80Q9ULG1 1556 aaPredicted RBP27.05■■□□□ 1.92
NECTIN1-202ENST00000340882 PKD2Q13563 968 aa27.03■■□□□ 1.92
NECTIN1-202ENST00000340882 A2MP01023 1474 aa27■■□□□ 1.91
NECTIN1-202ENST00000340882 GGT6Q6P531 493 aa26.98■■□□□ 1.91
NECTIN1-202ENST00000340882 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.91
NECTIN1-202ENST00000340882 DNMT1P26358 1616 aaKnown RBP26.95■■□□□ 1.91
NECTIN1-202ENST00000340882 PPP6R1Q9UPN7 881 aa26.95■■□□□ 1.9
NECTIN1-202ENST00000340882 MED1Q15648 1581 aaPredicted RBP26.94■■□□□ 1.9
NECTIN1-202ENST00000340882 KIAA1107Q9UPP5 1409 aa26.94■■□□□ 1.9
NECTIN1-202ENST00000340882 HSPA1LP34931 641 aa26.93■■□□□ 1.9
NECTIN1-202ENST00000340882 ADGBQ8N7X0 1667 aa26.92■■□□□ 1.9
NECTIN1-202ENST00000340882 POLR1AO95602 1720 aaPredicted RBP26.91■■□□□ 1.9
NECTIN1-202ENST00000340882 A2ML1A8K2U0 1454 aa26.91■■□□□ 1.9
NECTIN1-202ENST00000340882 NEURL4Q96JN8 1562 aa26.9■■□□□ 1.9
NECTIN1-202ENST00000340882 CFDP1Q9UEE9 299 aaPredicted RBP26.89■■□□□ 1.9
NECTIN1-202ENST00000340882 PLEKHH2Q8IVE3 1493 aa26.88■■□□□ 1.89
NECTIN1-202ENST00000340882 PIP4K2BP78356 416 aa26.88■■□□□ 1.89
NECTIN1-202ENST00000340882 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
NECTIN1-202ENST00000340882 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
NECTIN1-202ENST00000340882 ZNF644Q9H582 1327 aaPredicted RBP26.85■■□□□ 1.89
NECTIN1-202ENST00000340882 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
NECTIN1-202ENST00000340882 FBXO31Q5XUX0 539 aaPredicted RBP26.83■■□□□ 1.89
NECTIN1-202ENST00000340882 SHANK2Q9UPX8 1470 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms