RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
DNMT1-201ENST00000340748 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
DNMT1-201ENST00000340748 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.29
DNMT1-201ENST00000340748 SIN3AQ96ST3 1273 aa16.83■□□□□ 0.29
DNMT1-201ENST00000340748 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
DNMT1-201ENST00000340748 CFTRP13569 1480 aa16.82■□□□□ 0.28
DNMT1-201ENST00000340748 DCAF11Q8TEB1 546 aa16.81■□□□□ 0.28
DNMT1-201ENST00000340748 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
DNMT1-201ENST00000340748 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
DNMT1-201ENST00000340748 NBR1Q14596 966 aa16.78■□□□□ 0.28
DNMT1-201ENST00000340748 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.28
DNMT1-201ENST00000340748 PKD2Q13563 968 aa16.77■□□□□ 0.28
DNMT1-201ENST00000340748 BECN1Q14457 450 aa16.77■□□□□ 0.28
DNMT1-201ENST00000340748 NUP155O75694 1391 aa16.77■□□□□ 0.27
DNMT1-201ENST00000340748 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
DNMT1-201ENST00000340748 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
DNMT1-201ENST00000340748 IGF1RP08069 1367 aa16.74■□□□□ 0.27
DNMT1-201ENST00000340748 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
DNMT1-201ENST00000340748 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
DNMT1-201ENST00000340748 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
DNMT1-201ENST00000340748 TNNT2P45379 298 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-201ENST00000340748 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
DNMT1-201ENST00000340748 PPP4R2Q9NY27 417 aa16.71■□□□□ 0.27
DNMT1-201ENST00000340748 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
DNMT1-201ENST00000340748 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
DNMT1-201ENST00000340748 TMF1P82094 1093 aa16.68■□□□□ 0.26
DNMT1-201ENST00000340748 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-201ENST00000340748 ANP32EQ9BTT0 268 aa16.67■□□□□ 0.26
DNMT1-201ENST00000340748 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
DNMT1-201ENST00000340748 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
DNMT1-201ENST00000340748 ATF3P18847 181 aa16.67■□□□□ 0.26
DNMT1-201ENST00000340748 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
DNMT1-201ENST00000340748 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
DNMT1-201ENST00000340748 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-201ENST00000340748 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
DNMT1-201ENST00000340748 SYNJ2O15056 1496 aa16.64■□□□□ 0.26
DNMT1-201ENST00000340748 EVA1CP58658 441 aa16.63■□□□□ 0.25
DNMT1-201ENST00000340748 FOXD1Q16676 465 aa16.63■□□□□ 0.25
DNMT1-201ENST00000340748 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
DNMT1-201ENST00000340748 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
DNMT1-201ENST00000340748 CHMP4BQ9H444 224 aaKnown RBP16.62■□□□□ 0.25
DNMT1-201ENST00000340748 MS4A1P11836 297 aa16.62■□□□□ 0.25
DNMT1-201ENST00000340748 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
DNMT1-201ENST00000340748 CC2D1BQ5T0F9 858 aaKnown RBP16.61■□□□□ 0.25
DNMT1-201ENST00000340748 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
DNMT1-201ENST00000340748 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
DNMT1-201ENST00000340748 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
DNMT1-201ENST00000340748 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.6■□□□□ 0.25
DNMT1-201ENST00000340748 RAB3GAP2Q9H2M9 1393 aa16.59■□□□□ 0.25
DNMT1-201ENST00000340748 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
DNMT1-201ENST00000340748 NCLP19338 710 aaKnown RBP16.59■□□□□ 0.25
DNMT1-201ENST00000340748 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
DNMT1-201ENST00000340748 RAPGEF3O95398 923 aa16.58■□□□□ 0.25
DNMT1-201ENST00000340748 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
DNMT1-201ENST00000340748 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
DNMT1-201ENST00000340748 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
DNMT1-201ENST00000340748 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-201ENST00000340748 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
DNMT1-201ENST00000340748 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
DNMT1-201ENST00000340748 PROSER2Q86WR7 435 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-201ENST00000340748 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
DNMT1-201ENST00000340748 GLIPR1L2Q4G1C9 344 aa16.54■□□□□ 0.24
DNMT1-201ENST00000340748 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-201ENST00000340748 MSH5O43196 834 aa16.53■□□□□ 0.24
DNMT1-201ENST00000340748 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
DNMT1-201ENST00000340748 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
DNMT1-201ENST00000340748 SYNJ1O43426 1573 aa16.52■□□□□ 0.23
DNMT1-201ENST00000340748 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.23
DNMT1-201ENST00000340748 KTN1Q86UP2 1357 aaKnown RBP16.52■□□□□ 0.23
DNMT1-201ENST00000340748 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.23
DNMT1-201ENST00000340748 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-201ENST00000340748 PSME1Q06323 249 aa16.51■□□□□ 0.23
DNMT1-201ENST00000340748 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
DNMT1-201ENST00000340748 TRAK1Q9UPV9 953 aa16.5■□□□□ 0.23
DNMT1-201ENST00000340748 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
DNMT1-201ENST00000340748 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
DNMT1-201ENST00000340748 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
DNMT1-201ENST00000340748 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
DNMT1-201ENST00000340748 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
DNMT1-201ENST00000340748 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
DNMT1-201ENST00000340748 AMPHP49418 695 aa16.47■□□□□ 0.23
DNMT1-201ENST00000340748 RALBP1Q15311 655 aa16.47■□□□□ 0.23
DNMT1-201ENST00000340748 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
DNMT1-201ENST00000340748 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-201ENST00000340748 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-201ENST00000340748 RGS3P49796 1198 aa16.47■□□□□ 0.23
DNMT1-201ENST00000340748 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-201ENST00000340748 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
DNMT1-201ENST00000340748 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
DNMT1-201ENST00000340748 EIF3AQ14152 1382 aaKnown RBP16.46■□□□□ 0.23
DNMT1-201ENST00000340748 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
DNMT1-201ENST00000340748 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.22
DNMT1-201ENST00000340748 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
DNMT1-201ENST00000340748 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
DNMT1-201ENST00000340748 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
DNMT1-201ENST00000340748 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
DNMT1-201ENST00000340748 CUX1P39880 1505 aa16.43■□□□□ 0.22
DNMT1-201ENST00000340748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
DNMT1-201ENST00000340748 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
DNMT1-201ENST00000340748 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms