RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 PTPRKQ15262 1439 aa26.89■■□□□ 1.89
VMAC-201ENST00000339485 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
VMAC-201ENST00000339485 ZNF644Q9H582 1327 aaPredicted RBP26.85■■□□□ 1.89
VMAC-201ENST00000339485 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
VMAC-201ENST00000339485 CAMSAP2Q08AD1 1489 aa26.83■■□□□ 1.89
VMAC-201ENST00000339485 RAB3GAP2Q9H2M9 1393 aa26.82■■□□□ 1.88
VMAC-201ENST00000339485 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
VMAC-201ENST00000339485 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.82■■□□□ 1.88
VMAC-201ENST00000339485 SUPT16HQ9Y5B9 1047 aaKnown RBP26.8■■□□□ 1.88
VMAC-201ENST00000339485 PREX2Q70Z35 1606 aa26.8■■□□□ 1.88
VMAC-201ENST00000339485 KCNH8Q96L42 1107 aa26.79■■□□□ 1.88
VMAC-201ENST00000339485 ZNF777Q9ULD5 760 aaPredicted RBP26.79■■□□□ 1.88
VMAC-201ENST00000339485 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
VMAC-201ENST00000339485 CDC42BPBQ9Y5S2 1711 aa26.78■■□□□ 1.88
VMAC-201ENST00000339485 DAPK1P53355 1430 aa26.76■■□□□ 1.87
VMAC-201ENST00000339485 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
VMAC-201ENST00000339485 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
VMAC-201ENST00000339485 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
VMAC-201ENST00000339485 MYO5CQ9NQX4 1742 aa26.75■■□□□ 1.87
VMAC-201ENST00000339485 WDR7Q9Y4E6 1490 aa26.74■■□□□ 1.87
VMAC-201ENST00000339485 CHIC2Q9UKJ5 165 aa26.73■■□□□ 1.87
VMAC-201ENST00000339485 HFM1A2PYH4 1435 aa26.73■■□□□ 1.87
VMAC-201ENST00000339485 ABCC5O15440 1437 aa26.73■■□□□ 1.87
VMAC-201ENST00000339485 NAIPQ13075 1403 aa26.69■■□□□ 1.86
VMAC-201ENST00000339485 ASXL2Q76L83 1435 aa26.69■■□□□ 1.86
VMAC-201ENST00000339485 ARHGAP5Q13017 1502 aa26.68■■□□□ 1.86
VMAC-201ENST00000339485 SAMD9LQ8IVG5 1584 aa26.68■■□□□ 1.86
VMAC-201ENST00000339485 CROCC2H7BZ55 1655 aa26.68■■□□□ 1.86
VMAC-201ENST00000339485 GCC2Q8IWJ2 1684 aa26.68■■□□□ 1.86
VMAC-201ENST00000339485 NPM1P06748 294 aaKnown RBP eCLIP26.67■■□□□ 1.86
VMAC-201ENST00000339485 RRP7BPQ9NSQ0 103 aa26.66■■□□□ 1.86
VMAC-201ENST00000339485 AKNAQ7Z591 1439 aa26.64■■□□□ 1.86
VMAC-201ENST00000339485 CYB5RLQ6IPT4 315 aa26.63■■□□□ 1.85
VMAC-201ENST00000339485 ADGBQ8N7X0 1667 aa26.61■■□□□ 1.85
VMAC-201ENST00000339485 PLCH2O75038 1416 aa26.6■■□□□ 1.85
VMAC-201ENST00000339485 ROCK1Q13464 1354 aa26.59■■□□□ 1.85
VMAC-201ENST00000339485 ABCA9Q8IUA7 1624 aa26.59■■□□□ 1.85
VMAC-201ENST00000339485 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
VMAC-201ENST00000339485 SYCP2Q9BX26 1530 aa26.57■■□□□ 1.84
VMAC-201ENST00000339485 HNRNPMP52272 730 aaKnown RBP eCLIP26.57■■□□□ 1.84
VMAC-201ENST00000339485 MBD5Q9P267 1494 aa26.57■■□□□ 1.84
VMAC-201ENST00000339485 KDM6BO15054 1643 aa26.56■■□□□ 1.84
VMAC-201ENST00000339485 MAPKBP1O60336 1514 aa26.54■■□□□ 1.84
VMAC-201ENST00000339485 SHANK2Q9UPX8 1470 aa26.53■■□□□ 1.84
VMAC-201ENST00000339485 ADGRL2O95490 1459 aa26.52■■□□□ 1.84
VMAC-201ENST00000339485 CCDC141Q6ZP82 1450 aa26.52■■□□□ 1.84
VMAC-201ENST00000339485 ARAP3Q8WWN8 1544 aa26.52■■□□□ 1.84
VMAC-201ENST00000339485 C9orf84Q5VXU9 1444 aa26.51■■□□□ 1.83
VMAC-201ENST00000339485 TSHZ2Q9NRE2 1034 aa26.51■■□□□ 1.83
VMAC-201ENST00000339485 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
VMAC-201ENST00000339485 PLEKHH2Q8IVE3 1493 aa26.5■■□□□ 1.83
VMAC-201ENST00000339485 EFCAB2Q5VUJ9 269 aa26.5■■□□□ 1.83
VMAC-201ENST00000339485 ABCC1P33527 1531 aa26.48■■□□□ 1.83
VMAC-201ENST00000339485 KIAA1107Q9UPP5 1409 aa26.47■■□□□ 1.83
VMAC-201ENST00000339485 ANKRD30AQ9BXX3 1397 aa26.47■■□□□ 1.83
VMAC-201ENST00000339485 ARHGEF12Q9NZN5 1544 aa26.46■■□□□ 1.83
VMAC-201ENST00000339485 TSPY4P0CV99 314 aa26.46■■□□□ 1.83
VMAC-201ENST00000339485 TSPY10P0CW01 314 aa26.46■■□□□ 1.83
VMAC-201ENST00000339485 FANCAO15360 1455 aa26.44■■□□□ 1.82
VMAC-201ENST00000339485 RSPH4AQ5TD94 716 aa26.43■■□□□ 1.82
VMAC-201ENST00000339485 MAST1Q9Y2H9 1570 aa26.39■■□□□ 1.82
VMAC-201ENST00000339485 TRIM52Q96A61 297 aa26.38■■□□□ 1.81
VMAC-201ENST00000339485 CD109Q6YHK3 1445 aa26.37■■□□□ 1.81
VMAC-201ENST00000339485 TRAPPC8Q9Y2L5 1435 aa26.36■■□□□ 1.81
VMAC-201ENST00000339485 KIF15Q9NS87 1388 aa26.35■■□□□ 1.81
VMAC-201ENST00000339485 ANKRD50Q9ULJ7 1429 aa26.35■■□□□ 1.81
VMAC-201ENST00000339485 ADGRL1O94910 1474 aa26.33■■□□□ 1.81
VMAC-201ENST00000339485 PLXNC1O60486 1568 aa26.31■■□□□ 1.8
VMAC-201ENST00000339485 CFAP74Q9C0B2 1584 aa26.29■■□□□ 1.8
VMAC-201ENST00000339485 DENND4BO75064 1496 aaPredicted RBP26.29■■□□□ 1.8
VMAC-201ENST00000339485 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
VMAC-201ENST00000339485 MAP3K4Q9Y6R4 1608 aa26.27■■□□□ 1.8
VMAC-201ENST00000339485 AFAP1Q8N556 730 aa26.27■■□□□ 1.8
VMAC-201ENST00000339485 ANP32EQ9BTT0 268 aa26.26■■□□□ 1.79
VMAC-201ENST00000339485 SIN3AQ96ST3 1273 aa26.25■■□□□ 1.79
VMAC-201ENST00000339485 DIP2BQ9P265 1576 aa26.25■■□□□ 1.79
VMAC-201ENST00000339485 GLI2P10070 1586 aa26.25■■□□□ 1.79
VMAC-201ENST00000339485 MPHOSPH9Q99550 1183 aa26.25■■□□□ 1.79
VMAC-201ENST00000339485 ZFYVE16Q7Z3T8 1539 aa26.24■■□□□ 1.79
VMAC-201ENST00000339485 DDX10Q13206 875 aaKnown RBP26.23■■□□□ 1.79
VMAC-201ENST00000339485 SPAG9O60271 1321 aaKnown RBP26.22■■□□□ 1.79
VMAC-201ENST00000339485 PZPP20742 1482 aa26.21■■□□□ 1.79
VMAC-201ENST00000339485 PPP1R15AO75807 674 aaPredicted RBP26.21■■□□□ 1.79
VMAC-201ENST00000339485 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.78
VMAC-201ENST00000339485 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
VMAC-201ENST00000339485 RTEL1-TNFRSF6BF6WH68 1400 aa26.18■■□□□ 1.78
VMAC-201ENST00000339485 ATP7AQ04656 1500 aa26.18■■□□□ 1.78
VMAC-201ENST00000339485 SLC4A1APQ9BWU0 796 aaKnown RBP26.18■■□□□ 1.78
VMAC-201ENST00000339485 TIMELESSQ9UNS1 1208 aa26.18■■□□□ 1.78
VMAC-201ENST00000339485 FAM69CQ0P6D2 419 aa26.17■■□□□ 1.78
VMAC-201ENST00000339485 FKBP8Q14318 412 aa26.17■■□□□ 1.78
VMAC-201ENST00000339485 BCANQ96GW7 911 aa26.17■■□□□ 1.78
VMAC-201ENST00000339485 NEO1Q92859 1461 aa26.17■■□□□ 1.78
VMAC-201ENST00000339485 ZNF518AQ6AHZ1 1483 aa26.16■■□□□ 1.78
VMAC-201ENST00000339485 FOXD1Q16676 465 aa26.15■■□□□ 1.78
VMAC-201ENST00000339485 NUP155O75694 1391 aa26.14■■□□□ 1.78
VMAC-201ENST00000339485 KDM5DQ9BY66 1539 aa26.14■■□□□ 1.77
VMAC-201ENST00000339485 TSPOAP1O95153 1857 aa26.14■■□□□ 1.77
VMAC-201ENST00000339485 POGZQ7Z3K3 1410 aa26.13■■□□□ 1.77
VMAC-201ENST00000339485 ERBINQ96RT1 1412 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms