RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 G3V3G9 751 aa16.04■□□□□ 0.16
RERE-201ENST00000337907 DCAF8Q5TAQ9 597 aa16.04■□□□□ 0.16
RERE-201ENST00000337907 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
RERE-201ENST00000337907 CLIP1P30622 1438 aa16.03■□□□□ 0.16
RERE-201ENST00000337907 CFDP1Q9UEE9 299 aaPredicted RBP16.02■□□□□ 0.16
RERE-201ENST00000337907 TPM3P06753 285 aa16.02■□□□□ 0.16
RERE-201ENST00000337907 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.15
RERE-201ENST00000337907 TMF1P82094 1093 aa16.02■□□□□ 0.15
RERE-201ENST00000337907 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
RERE-201ENST00000337907 HSP90B1P14625 803 aaKnown RBP16.01■□□□□ 0.15
RERE-201ENST00000337907 GORABQ5T7V8 394 aa16.01■□□□□ 0.15
RERE-201ENST00000337907 HDAC5Q9UQL6 1122 aa16■□□□□ 0.15
RERE-201ENST00000337907 PDE4CQ08493 712 aa16■□□□□ 0.15
RERE-201ENST00000337907 PHF14O94880 888 aa15.99■□□□□ 0.15
RERE-201ENST00000337907 SRPK2P78362 688 aaKnown RBP15.98■□□□□ 0.15
RERE-201ENST00000337907 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
RERE-201ENST00000337907 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
RERE-201ENST00000337907 TSR1Q2NL82 804 aaKnown RBP15.96■□□□□ 0.14
RERE-201ENST00000337907 VPS53Q5VIR6 699 aa15.95■□□□□ 0.14
RERE-201ENST00000337907 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
RERE-201ENST00000337907 TPM2P07951 284 aa15.94■□□□□ 0.14
RERE-201ENST00000337907 CALRP27797 417 aaKnown RBP15.94■□□□□ 0.14
RERE-201ENST00000337907 CCDC70Q6NSX1 233 aa15.94■□□□□ 0.14
RERE-201ENST00000337907 KIF3AQ9Y496 699 aa15.94■□□□□ 0.14
RERE-201ENST00000337907 MARCH6O60337 910 aa15.94■□□□□ 0.14
RERE-201ENST00000337907 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
RERE-201ENST00000337907 CREBRFQ8IUR6 639 aa15.93■□□□□ 0.14
RERE-201ENST00000337907 SOX12O15370 315 aa15.93■□□□□ 0.14
RERE-201ENST00000337907 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
RERE-201ENST00000337907 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
RERE-201ENST00000337907 ZNF330Q9Y3S2 320 aaPredicted RBP15.92■□□□□ 0.14
RERE-201ENST00000337907 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
RERE-201ENST00000337907 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
RERE-201ENST00000337907 CSB-PGBD3P0DP91 1061 aa15.91■□□□□ 0.14
RERE-201ENST00000337907 TPD52L1Q16890 204 aaPredicted RBP15.9■□□□□ 0.14
RERE-201ENST00000337907 TCEAL9Q9UHQ7 104 aa15.9■□□□□ 0.14
RERE-201ENST00000337907 APBB1O00213 710 aa15.89■□□□□ 0.13
RERE-201ENST00000337907 CHMP4CQ96CF2 233 aa15.89■□□□□ 0.13
RERE-201ENST00000337907 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
RERE-201ENST00000337907 GPS2Q13227 327 aa15.88■□□□□ 0.13
RERE-201ENST00000337907 TPM1P09493 284 aa15.88■□□□□ 0.13
RERE-201ENST00000337907 CCDC180Q9P1Z9 1646 aa15.88■□□□□ 0.13
RERE-201ENST00000337907 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
RERE-201ENST00000337907 HMMRO75330 724 aa15.87■□□□□ 0.13
RERE-201ENST00000337907 STK31Q9BXU1 1019 aa15.87■□□□□ 0.13
RERE-201ENST00000337907 TRIM6-TRIM34B2RNG4 842 aa15.87■□□□□ 0.13
RERE-201ENST00000337907 ITPRIPQ8IWB1 547 aa15.86■□□□□ 0.13
RERE-201ENST00000337907 KIF16BQ96L93 1317 aa15.86■□□□□ 0.13
RERE-201ENST00000337907 PES1O00541 588 aaKnown RBP15.85■□□□□ 0.13
RERE-201ENST00000337907 EEA1Q15075 1411 aa15.85■□□□□ 0.13
RERE-201ENST00000337907 PMFBP1Q8TBY8 1022 aa15.85■□□□□ 0.13
RERE-201ENST00000337907 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
RERE-201ENST00000337907 ARID3AQ99856 593 aa15.85■□□□□ 0.13
RERE-201ENST00000337907 FRAT2O75474 233 aaPredicted RBP15.84■□□□□ 0.13
RERE-201ENST00000337907 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
RERE-201ENST00000337907 KTN1Q86UP2 1357 aaKnown RBP15.84■□□□□ 0.13
RERE-201ENST00000337907 TCERG1O14776 1098 aaKnown RBP15.84■□□□□ 0.13
RERE-201ENST00000337907 B4GALNT3Q6L9W6 998 aa15.84■□□□□ 0.13
RERE-201ENST00000337907 RRP12Q5JTH9 1297 aaKnown RBP15.84■□□□□ 0.13
RERE-201ENST00000337907 CCDC9Q9Y3X0 531 aaKnown RBP15.84■□□□□ 0.13
RERE-201ENST00000337907 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.13
RERE-201ENST00000337907 GOLGA6L3A6NEY3 463 aa15.83■□□□□ 0.12
RERE-201ENST00000337907 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
RERE-201ENST00000337907 DEKP35659 375 aaKnown RBP15.83■□□□□ 0.12
RERE-201ENST00000337907 GZF1Q9H116 711 aaPredicted RBP15.82■□□□□ 0.12
RERE-201ENST00000337907 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
RERE-201ENST00000337907 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
RERE-201ENST00000337907 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
RERE-201ENST00000337907 AMOTL1Q8IY63 956 aa15.8■□□□□ 0.12
RERE-201ENST00000337907 ST18O60284 1047 aa15.8■□□□□ 0.12
RERE-201ENST00000337907 DCAF11Q8TEB1 546 aa15.8■□□□□ 0.12
RERE-201ENST00000337907 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
RERE-201ENST00000337907 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
RERE-201ENST00000337907 H3BQV1 296 aa15.79■□□□□ 0.12
RERE-201ENST00000337907 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
RERE-201ENST00000337907 TOMM22Q9NS69 142 aa15.79■□□□□ 0.12
RERE-201ENST00000337907 GOLGA6L19H0YKK7 550 aa15.78■□□□□ 0.12
RERE-201ENST00000337907 GTF2E1P29083 439 aaPredicted RBP15.78■□□□□ 0.12
RERE-201ENST00000337907 LRRFIP1Q32MZ4 808 aaKnown RBP15.77■□□□□ 0.11
RERE-201ENST00000337907 NOL10Q9BSC4 688 aaKnown RBP15.76■□□□□ 0.11
RERE-201ENST00000337907 MLECQ14165 292 aa15.76■□□□□ 0.11
RERE-201ENST00000337907 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
RERE-201ENST00000337907 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
RERE-201ENST00000337907 IPO7O95373 1038 aaKnown RBP15.75■□□□□ 0.11
RERE-201ENST00000337907 CCDC47Q96A33 483 aaKnown RBP15.75■□□□□ 0.11
RERE-201ENST00000337907 ATP6V1DQ9Y5K8 247 aa15.75■□□□□ 0.11
RERE-201ENST00000337907 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
RERE-201ENST00000337907 LMOD3Q0VAK6 560 aa15.75■□□□□ 0.11
RERE-201ENST00000337907 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
RERE-201ENST00000337907 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.114e-6■■■□□ 15.2
RERE-201ENST00000337907 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
RERE-201ENST00000337907 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
RERE-201ENST00000337907 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
RERE-201ENST00000337907 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
RERE-201ENST00000337907 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
RERE-201ENST00000337907 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.73■□□□□ 0.11
RERE-201ENST00000337907 HOOK1Q9UJC3 728 aaKnown RBP15.73■□□□□ 0.11
RERE-201ENST00000337907 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
RERE-201ENST00000337907 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
RERE-201ENST00000337907 FAM184AQ8NB25 1140 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms