RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
SREK1-202ENST00000334121 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
SREK1-202ENST00000334121 TMF1P82094 1093 aa14.23□□□□□ -0.13
SREK1-202ENST00000334121 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
SREK1-202ENST00000334121 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
SREK1-202ENST00000334121 GORABQ5T7V8 394 aa14.23□□□□□ -0.13
SREK1-202ENST00000334121 VPS53Q5VIR6 699 aa14.21□□□□□ -0.13
SREK1-202ENST00000334121 SLC4A10Q6U841 1118 aa14.21□□□□□ -0.13
SREK1-202ENST00000334121 HSP90B1P14625 803 aaKnown RBP14.21□□□□□ -0.13
SREK1-202ENST00000334121 GZF1Q9H116 711 aaPredicted RBP14.21□□□□□ -0.13
SREK1-202ENST00000334121 GOLGA6L6A8MZA4 724 aa14.21□□□□□ -0.13
SREK1-202ENST00000334121 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.14
SREK1-202ENST00000334121 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
SREK1-202ENST00000334121 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.144e-10■■■□□ 18
SREK1-202ENST00000334121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.2□□□□□ -0.14
SREK1-202ENST00000334121 KANK1Q14678 1352 aa14.2□□□□□ -0.14
SREK1-202ENST00000334121 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
SREK1-202ENST00000334121 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
SREK1-202ENST00000334121 CCNB3Q8WWL7 1395 aa14.19□□□□□ -0.14
SREK1-202ENST00000334121 FRAT2O75474 233 aaPredicted RBP14.19□□□□□ -0.14
SREK1-202ENST00000334121 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
SREK1-202ENST00000334121 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
SREK1-202ENST00000334121 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
SREK1-202ENST00000334121 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
SREK1-202ENST00000334121 RAD21O60216 631 aa14.17□□□□□ -0.14
SREK1-202ENST00000334121 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
SREK1-202ENST00000334121 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
SREK1-202ENST00000334121 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
SREK1-202ENST00000334121 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
SREK1-202ENST00000334121 HDGFL2Q7Z4V5 671 aaPredicted RBP14.17□□□□□ -0.14
SREK1-202ENST00000334121 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
SREK1-202ENST00000334121 TRIM6-TRIM34B2RNG4 842 aa14.16□□□□□ -0.14
SREK1-202ENST00000334121 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
SREK1-202ENST00000334121 PHF23Q9BUL5 403 aaPredicted RBP14.15□□□□□ -0.14
SREK1-202ENST00000334121 MCCP23508 829 aa14.15□□□□□ -0.14
SREK1-202ENST00000334121 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.14
SREK1-202ENST00000334121 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
SREK1-202ENST00000334121 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
SREK1-202ENST00000334121 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
SREK1-202ENST00000334121 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
SREK1-202ENST00000334121 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
SREK1-202ENST00000334121 PKD2Q13563 968 aa14.13□□□□□ -0.15
SREK1-202ENST00000334121 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
SREK1-202ENST00000334121 SLKQ9H2G2 1235 aaPredicted RBP14.12□□□□□ -0.15
SREK1-202ENST00000334121 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
SREK1-202ENST00000334121 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
SREK1-202ENST00000334121 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
SREK1-202ENST00000334121 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
SREK1-202ENST00000334121 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
SREK1-202ENST00000334121 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
SREK1-202ENST00000334121 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
SREK1-202ENST00000334121 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
SREK1-202ENST00000334121 FOXD4L6Q3SYB3 417 aaPredicted RBP14.1□□□□□ -0.15
SREK1-202ENST00000334121 FOXD4L3Q6VB84 417 aaPredicted RBP14.1□□□□□ -0.15
SREK1-202ENST00000334121 AMPHP49418 695 aa14.09□□□□□ -0.15
SREK1-202ENST00000334121 NRDCO43847 1150 aa14.09□□□□□ -0.15
SREK1-202ENST00000334121 EVA1CP58658 441 aa14.09□□□□□ -0.15
SREK1-202ENST00000334121 NECTIN2Q92692 538 aa14.09□□□□□ -0.15
SREK1-202ENST00000334121 ELL2O00472 640 aaPredicted RBP14.09□□□□□ -0.15
SREK1-202ENST00000334121 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
SREK1-202ENST00000334121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.08□□□□□ -0.15
SREK1-202ENST00000334121 KIF3BO15066 747 aa14.08□□□□□ -0.16
SREK1-202ENST00000334121 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
SREK1-202ENST00000334121 MFAP1P55081 439 aaKnown RBP14.08□□□□□ -0.16
SREK1-202ENST00000334121 HNRNPMP52272 730 aaKnown RBP eCLIP14.08□□□□□ -0.163e-7■■■■□ 25
SREK1-202ENST00000334121 MEX3CQ5U5Q3 659 aaKnown RBP14.08□□□□□ -0.16
SREK1-202ENST00000334121 MS4A1P11836 297 aa14.07□□□□□ -0.16
SREK1-202ENST00000334121 KIAA2012Q0VF49 1180 aa14.07□□□□□ -0.16
SREK1-202ENST00000334121 CHMP4BQ9H444 224 aaKnown RBP14.07□□□□□ -0.16
SREK1-202ENST00000334121 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
SREK1-202ENST00000334121 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
SREK1-202ENST00000334121 MSNP26038 577 aaKnown RBP14.07□□□□□ -0.16
SREK1-202ENST00000334121 MARCH6O60337 910 aa14.05□□□□□ -0.16
SREK1-202ENST00000334121 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
SREK1-202ENST00000334121 CHAF1AQ13111 956 aaPredicted RBP14.05□□□□□ -0.16
SREK1-202ENST00000334121 TRAK1Q9UPV9 953 aa14.05□□□□□ -0.16
SREK1-202ENST00000334121 PES1O00541 588 aaKnown RBP14.04□□□□□ -0.16
SREK1-202ENST00000334121 STK31Q9BXU1 1019 aa14.04□□□□□ -0.16
SREK1-202ENST00000334121 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
SREK1-202ENST00000334121 EID1Q9Y6B2 187 aa14.03□□□□□ -0.16
SREK1-202ENST00000334121 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.16
SREK1-202ENST00000334121 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
SREK1-202ENST00000334121 BCL2L13Q9BXK5 485 aa14.01□□□□□ -0.17
SREK1-202ENST00000334121 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
SREK1-202ENST00000334121 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
SREK1-202ENST00000334121 WASHC2CQ9Y4E1 1318 aa14□□□□□ -0.17
SREK1-202ENST00000334121 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
SREK1-202ENST00000334121 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
SREK1-202ENST00000334121 IPO8O15397 1037 aaKnown RBP13.99□□□□□ -0.17
SREK1-202ENST00000334121 ZNF428Q96B54 188 aa13.99□□□□□ -0.17
SREK1-202ENST00000334121 CUX2O14529 1486 aa13.99□□□□□ -0.17
SREK1-202ENST00000334121 EIF2S2P20042 333 aaKnown RBP13.98□□□□□ -0.17
SREK1-202ENST00000334121 RILPL2Q969X0 211 aa13.98□□□□□ -0.17
SREK1-202ENST00000334121 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
SREK1-202ENST00000334121 KRI1Q8N9T8 703 aaKnown RBP13.97□□□□□ -0.17
SREK1-202ENST00000334121 NUP155O75694 1391 aa13.97□□□□□ -0.17
SREK1-202ENST00000334121 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
SREK1-202ENST00000334121 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.17
SREK1-202ENST00000334121 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
SREK1-202ENST00000334121 KANK4Q5T7N3 995 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms