RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KIF14Q15058 1648 aa24.98■■□□□ 1.59
DDX28-201ENST00000332395 ROCK1Q13464 1354 aa24.98■■□□□ 1.59
DDX28-201ENST00000332395 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
DDX28-201ENST00000332395 GPATCH8Q9UKJ3 1502 aaKnown RBP24.95■■□□□ 1.58
DDX28-201ENST00000332395 DENND4BO75064 1496 aaPredicted RBP24.94■■□□□ 1.58
DDX28-201ENST00000332395 CHD1O14646 1710 aa24.94■■□□□ 1.58
DDX28-201ENST00000332395 GTF3C3Q9Y5Q9 886 aa24.94■■□□□ 1.58
DDX28-201ENST00000332395 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
DDX28-201ENST00000332395 CAMSAP2Q08AD1 1489 aa24.93■■□□□ 1.58
DDX28-201ENST00000332395 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
DDX28-201ENST00000332395 ATP10BO94823 1461 aa24.91■■□□□ 1.58
DDX28-201ENST00000332395 PLEKHD1A6NEE1 506 aa24.87■■□□□ 1.57
DDX28-201ENST00000332395 MPHOSPH9Q99550 1183 aa24.86■■□□□ 1.57
DDX28-201ENST00000332395 PTPRGP23470 1445 aa24.86■■□□□ 1.57
DDX28-201ENST00000332395 KDM5BQ9UGL1 1544 aa24.85■■□□□ 1.57
DDX28-201ENST00000332395 MYT1Q01538 1121 aa24.84■■□□□ 1.57
DDX28-201ENST00000332395 ADGBQ8N7X0 1667 aa24.83■■□□□ 1.57
DDX28-201ENST00000332395 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.56
DDX28-201ENST00000332395 ABCC10Q5T3U5 1492 aa24.82■■□□□ 1.56
DDX28-201ENST00000332395 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
DDX28-201ENST00000332395 SHROOM2Q13796 1616 aa24.81■■□□□ 1.56
DDX28-201ENST00000332395 ZNF777Q9ULD5 760 aaPredicted RBP24.81■■□□□ 1.56
DDX28-201ENST00000332395 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
DDX28-201ENST00000332395 ADGRL2O95490 1459 aa24.78■■□□□ 1.56
DDX28-201ENST00000332395 HIRIP3Q9BW71 556 aaPredicted RBP24.75■■□□□ 1.55
DDX28-201ENST00000332395 DDX10Q13206 875 aaKnown RBP24.74■■□□□ 1.55
DDX28-201ENST00000332395 FOXD1Q16676 465 aa24.73■■□□□ 1.55
DDX28-201ENST00000332395 ANKRD30BQ9BXX2 1392 aa24.71■■□□□ 1.55
DDX28-201ENST00000332395 ANKRD30AQ9BXX3 1397 aa24.7■■□□□ 1.54
DDX28-201ENST00000332395 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
DDX28-201ENST00000332395 SHANK2Q9UPX8 1470 aa24.69■■□□□ 1.54
DDX28-201ENST00000332395 PZPP20742 1482 aa24.67■■□□□ 1.54
DDX28-201ENST00000332395 RPRD2Q5VT52 1461 aaKnown RBP24.67■■□□□ 1.54
DDX28-201ENST00000332395 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
DDX28-201ENST00000332395 C9orf84Q5VXU9 1444 aa24.64■■□□□ 1.54
DDX28-201ENST00000332395 L3MBTL2Q969R5 705 aa24.63■■□□□ 1.53
DDX28-201ENST00000332395 PREX2Q70Z35 1606 aa24.63■■□□□ 1.53
DDX28-201ENST00000332395 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
DDX28-201ENST00000332395 ABCC2Q92887 1545 aa24.62■■□□□ 1.53
DDX28-201ENST00000332395 ARHGEF5Q12774 1597 aa24.61■■□□□ 1.53
DDX28-201ENST00000332395 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
DDX28-201ENST00000332395 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
DDX28-201ENST00000332395 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
DDX28-201ENST00000332395 SAMD9LQ8IVG5 1584 aa24.59■■□□□ 1.53
DDX28-201ENST00000332395 MBD5Q9P267 1494 aa24.58■■□□□ 1.52
DDX28-201ENST00000332395 TSPY4P0CV99 314 aa24.57■■□□□ 1.52
DDX28-201ENST00000332395 TSPY10P0CW01 314 aa24.57■■□□□ 1.52
DDX28-201ENST00000332395 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
DDX28-201ENST00000332395 KIAA1107Q9UPP5 1409 aa24.55■■□□□ 1.52
DDX28-201ENST00000332395 TTC37Q6PGP7 1564 aa24.55■■□□□ 1.52
DDX28-201ENST00000332395 KCNH8Q96L42 1107 aa24.54■■□□□ 1.52
DDX28-201ENST00000332395 CCDC141Q6ZP82 1450 aa24.53■■□□□ 1.52
DDX28-201ENST00000332395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.52
DDX28-201ENST00000332395 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
DDX28-201ENST00000332395 KIF15Q9NS87 1388 aa24.51■■□□□ 1.51
DDX28-201ENST00000332395 EIF4G2P78344 907 aaKnown RBP eCLIP24.5■■□□□ 1.51
DDX28-201ENST00000332395 PKD2Q13563 968 aa24.49■■□□□ 1.51
DDX28-201ENST00000332395 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
DDX28-201ENST00000332395 ANP32CO43423 234 aa24.49■■□□□ 1.51
DDX28-201ENST00000332395 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
DDX28-201ENST00000332395 RSPH4AQ5TD94 716 aa24.47■■□□□ 1.51
DDX28-201ENST00000332395 NUP155O75694 1391 aa24.47■■□□□ 1.51
DDX28-201ENST00000332395 NBPF8Q3BBV2 869 aa24.47■■□□□ 1.51
DDX28-201ENST00000332395 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
DDX28-201ENST00000332395 SYCP2Q9BX26 1530 aa24.47■■□□□ 1.51
DDX28-201ENST00000332395 ZCCHC11Q5TAX3 1644 aaKnown RBP24.46■■□□□ 1.51
DDX28-201ENST00000332395 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.51
DDX28-201ENST00000332395 CCER2I3L3R5 266 aa24.44■■□□□ 1.5
DDX28-201ENST00000332395 WASHC2AQ641Q2 1341 aa24.43■■□□□ 1.5
DDX28-201ENST00000332395 MAST1Q9Y2H9 1570 aa24.42■■□□□ 1.5
DDX28-201ENST00000332395 PLEKHH2Q8IVE3 1493 aa24.39■■□□□ 1.49
DDX28-201ENST00000332395 PLCH2O75038 1416 aa24.34■■□□□ 1.49
DDX28-201ENST00000332395 SPATA31E1Q6ZUB1 1445 aa24.34■■□□□ 1.49
DDX28-201ENST00000332395 PLXNC1O60486 1568 aa24.33■■□□□ 1.49
DDX28-201ENST00000332395 FAM135AQ9P2D6 1515 aa24.32■■□□□ 1.48
DDX28-201ENST00000332395 ARHGEF12Q9NZN5 1544 aa24.31■■□□□ 1.48
DDX28-201ENST00000332395 CCDC7Q96M83 1385 aa24.3■■□□□ 1.48
DDX28-201ENST00000332395 C11orf95C9JLR9 678 aaPredicted RBP24.29■■□□□ 1.48
DDX28-201ENST00000332395 UNC13BO14795 1591 aa24.29■■□□□ 1.48
DDX28-201ENST00000332395 CNTLNQ9NXG0 1405 aa24.29■■□□□ 1.48
DDX28-201ENST00000332395 POLR1AO95602 1720 aaPredicted RBP24.28■■□□□ 1.48
DDX28-201ENST00000332395 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
DDX28-201ENST00000332395 ABCC1P33527 1531 aa24.26■■□□□ 1.47
DDX28-201ENST00000332395 UHRF1BP1Q6BDS2 1440 aa24.26■■□□□ 1.47
DDX28-201ENST00000332395 ZNF326Q5BKZ1 582 aaKnown RBP24.25■■□□□ 1.47
DDX28-201ENST00000332395 DUOX2Q9NRD8 1548 aa24.24■■□□□ 1.47
DDX28-201ENST00000332395 ARAP3Q8WWN8 1544 aa24.21■■□□□ 1.47
DDX28-201ENST00000332395 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
DDX28-201ENST00000332395 USP47Q96K76 1375 aa24.21■■□□□ 1.47
DDX28-201ENST00000332395 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.47
DDX28-201ENST00000332395 IQGAP3Q86VI3 1631 aa24.2■■□□□ 1.46
DDX28-201ENST00000332395 ERBINQ96RT1 1412 aa24.19■■□□□ 1.46
DDX28-201ENST00000332395 KDM5CP41229 1560 aa24.19■■□□□ 1.46
DDX28-201ENST00000332395 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
DDX28-201ENST00000332395 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
DDX28-201ENST00000332395 MAGI2Q86UL8 1455 aa24.17■■□□□ 1.46
DDX28-201ENST00000332395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.16■■□□□ 1.46
DDX28-201ENST00000332395 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
DDX28-201ENST00000332395 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
DDX28-201ENST00000332395 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms