RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 SHANK2Q9UPX8 1470 aa20.03■□□□□ 0.8
SRPRA-201ENST00000332118 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
SRPRA-201ENST00000332118 PREX2Q70Z35 1606 aa20■□□□□ 0.79
SRPRA-201ENST00000332118 ARHGEF5Q12774 1597 aa20■□□□□ 0.79
SRPRA-201ENST00000332118 UHRF1BP1LA0JNW5 1464 aa20■□□□□ 0.79
SRPRA-201ENST00000332118 ABCC2Q92887 1545 aa20■□□□□ 0.79
SRPRA-201ENST00000332118 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
SRPRA-201ENST00000332118 PTPRGP23470 1445 aa19.96■□□□□ 0.79
SRPRA-201ENST00000332118 CDC42BPBQ9Y5S2 1711 aa19.95■□□□□ 0.78
SRPRA-201ENST00000332118 FBLN2P98095 1184 aa19.94■□□□□ 0.78
SRPRA-201ENST00000332118 ERCC6L2Q5T890 1561 aa19.93■□□□□ 0.78
SRPRA-201ENST00000332118 MAST1Q9Y2H9 1570 aa19.91■□□□□ 0.78
SRPRA-201ENST00000332118 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.78
SRPRA-201ENST00000332118 NCOA1Q15788 1441 aa19.88■□□□□ 0.77
SRPRA-201ENST00000332118 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
SRPRA-201ENST00000332118 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
SRPRA-201ENST00000332118 MYO5CQ9NQX4 1742 aa19.85■□□□□ 0.77
SRPRA-201ENST00000332118 MBD5Q9P267 1494 aa19.85■□□□□ 0.77
SRPRA-201ENST00000332118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.84■□□□□ 0.772e-7■■□□□ 12.7
SRPRA-201ENST00000332118 TTC37Q6PGP7 1564 aa19.84■□□□□ 0.77
SRPRA-201ENST00000332118 ARAP3Q8WWN8 1544 aa19.83■□□□□ 0.76
SRPRA-201ENST00000332118 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
SRPRA-201ENST00000332118 PZPP20742 1482 aa19.81■□□□□ 0.76
SRPRA-201ENST00000332118 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
SRPRA-201ENST00000332118 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
SRPRA-201ENST00000332118 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
SRPRA-201ENST00000332118 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
SRPRA-201ENST00000332118 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
SRPRA-201ENST00000332118 RPRD2Q5VT52 1461 aaKnown RBP19.76■□□□□ 0.75
SRPRA-201ENST00000332118 KIAA1107Q9UPP5 1409 aa19.76■□□□□ 0.75
SRPRA-201ENST00000332118 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
SRPRA-201ENST00000332118 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
SRPRA-201ENST00000332118 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
SRPRA-201ENST00000332118 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
SRPRA-201ENST00000332118 PLEKHH2Q8IVE3 1493 aa19.74■□□□□ 0.75
SRPRA-201ENST00000332118 RRP7BPQ9NSQ0 103 aa19.74■□□□□ 0.75
SRPRA-201ENST00000332118 C9orf84Q5VXU9 1444 aa19.74■□□□□ 0.75
SRPRA-201ENST00000332118 UNC13BO14795 1591 aa19.73■□□□□ 0.75
SRPRA-201ENST00000332118 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
SRPRA-201ENST00000332118 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
SRPRA-201ENST00000332118 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
SRPRA-201ENST00000332118 RSPH4AQ5TD94 716 aa19.7■□□□□ 0.74
SRPRA-201ENST00000332118 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
SRPRA-201ENST00000332118 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
SRPRA-201ENST00000332118 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
SRPRA-201ENST00000332118 ABCC1P33527 1531 aa19.67■□□□□ 0.74
SRPRA-201ENST00000332118 SYCP2Q9BX26 1530 aa19.67■□□□□ 0.74
SRPRA-201ENST00000332118 MAGI2Q86UL8 1455 aa19.66■□□□□ 0.74
SRPRA-201ENST00000332118 PLCH2O75038 1416 aa19.66■□□□□ 0.74
SRPRA-201ENST00000332118 ABCA9Q8IUA7 1624 aa19.66■□□□□ 0.74
SRPRA-201ENST00000332118 POLR1AO95602 1720 aaPredicted RBP19.65■□□□□ 0.74
SRPRA-201ENST00000332118 ARHGAP5Q13017 1502 aa19.64■□□□□ 0.73
SRPRA-201ENST00000332118 MIER1Q8N108 512 aa19.64■□□□□ 0.73
SRPRA-201ENST00000332118 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
SRPRA-201ENST00000332118 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
SRPRA-201ENST00000332118 ARHGEF12Q9NZN5 1544 aa19.59■□□□□ 0.73
SRPRA-201ENST00000332118 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.73
SRPRA-201ENST00000332118 DUOX2Q9NRD8 1548 aa19.58■□□□□ 0.72
SRPRA-201ENST00000332118 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
SRPRA-201ENST00000332118 ERBINQ96RT1 1412 aa19.56■□□□□ 0.72
SRPRA-201ENST00000332118 DEPDC5O75140 1603 aa19.55■□□□□ 0.72
SRPRA-201ENST00000332118 RTEL1-TNFRSF6BF6WH68 1400 aa19.54■□□□□ 0.72
SRPRA-201ENST00000332118 FAM135AQ9P2D6 1515 aa19.54■□□□□ 0.72
SRPRA-201ENST00000332118 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
SRPRA-201ENST00000332118 INO80Q9ULG1 1556 aaPredicted RBP19.54■□□□□ 0.72
SRPRA-201ENST00000332118 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
SRPRA-201ENST00000332118 ATP10AO60312 1499 aa19.52■□□□□ 0.72
SRPRA-201ENST00000332118 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
SRPRA-201ENST00000332118 SPATA31E1Q6ZUB1 1445 aa19.5■□□□□ 0.71
SRPRA-201ENST00000332118 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
SRPRA-201ENST00000332118 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
SRPRA-201ENST00000332118 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
SRPRA-201ENST00000332118 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
SRPRA-201ENST00000332118 EIF2AK4Q9P2K8 1649 aaKnown RBP19.49■□□□□ 0.71
SRPRA-201ENST00000332118 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
SRPRA-201ENST00000332118 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
SRPRA-201ENST00000332118 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
SRPRA-201ENST00000332118 VWDEQ8N2E2 1590 aa19.45■□□□□ 0.7
SRPRA-201ENST00000332118 L3MBTL2Q969R5 705 aa19.45■□□□□ 0.7
SRPRA-201ENST00000332118 LAMC1P11047 1609 aa19.43■□□□□ 0.7
SRPRA-201ENST00000332118 KDM5CP41229 1560 aa19.42■□□□□ 0.7
SRPRA-201ENST00000332118 NUP155O75694 1391 aa19.42■□□□□ 0.7
SRPRA-201ENST00000332118 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
SRPRA-201ENST00000332118 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
SRPRA-201ENST00000332118 BCORL1Q5H9F3 1711 aa19.41■□□□□ 0.7
SRPRA-201ENST00000332118 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
SRPRA-201ENST00000332118 TRAPPC8Q9Y2L5 1435 aa19.4■□□□□ 0.7
SRPRA-201ENST00000332118 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
SRPRA-201ENST00000332118 FOXD1Q16676 465 aa19.39■□□□□ 0.69
SRPRA-201ENST00000332118 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
SRPRA-201ENST00000332118 PKD2Q13563 968 aa19.38■□□□□ 0.69
SRPRA-201ENST00000332118 PLA2R1Q13018 1463 aa19.38■□□□□ 0.69
SRPRA-201ENST00000332118 ATP7AQ04656 1500 aa19.37■□□□□ 0.69
SRPRA-201ENST00000332118 FANCAO15360 1455 aa19.37■□□□□ 0.69
SRPRA-201ENST00000332118 PRDM15P57071 1507 aaPredicted RBP19.36■□□□□ 0.69
SRPRA-201ENST00000332118 TRPM1Q7Z4N2 1603 aa19.36■□□□□ 0.69
SRPRA-201ENST00000332118 TET3O43151 1660 aa19.35■□□□□ 0.69
SRPRA-201ENST00000332118 NBPF8Q3BBV2 869 aa19.35■□□□□ 0.69
SRPRA-201ENST00000332118 MROH1Q8NDA8 1641 aa19.34■□□□□ 0.69
SRPRA-201ENST00000332118 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms