RNA–Protein interactions for RNA: ENST00000331941.6

CSF3R-201, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5 BASIC

Gene CSF3R, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-201ENST00000331941 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
CSF3R-201ENST00000331941 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
CSF3R-201ENST00000331941 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
CSF3R-201ENST00000331941 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
CSF3R-201ENST00000331941 IPO9Q96P70 1041 aaKnown RBP17.4■□□□□ 0.38
CSF3R-201ENST00000331941 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
CSF3R-201ENST00000331941 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
CSF3R-201ENST00000331941 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
CSF3R-201ENST00000331941 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.37
CSF3R-201ENST00000331941 KDM6BO15054 1643 aa17.39■□□□□ 0.37
CSF3R-201ENST00000331941 L3MBTL2Q969R5 705 aa17.39■□□□□ 0.37
CSF3R-201ENST00000331941 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
CSF3R-201ENST00000331941 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
CSF3R-201ENST00000331941 NCOA1Q15788 1441 aa17.38■□□□□ 0.37
CSF3R-201ENST00000331941 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
CSF3R-201ENST00000331941 MAGI3Q5TCQ9 1506 aa17.38■□□□□ 0.37
CSF3R-201ENST00000331941 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
CSF3R-201ENST00000331941 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
CSF3R-201ENST00000331941 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
CSF3R-201ENST00000331941 FOXD1Q16676 465 aa17.36■□□□□ 0.37
CSF3R-201ENST00000331941 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
CSF3R-201ENST00000331941 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
CSF3R-201ENST00000331941 TCOF1Q13428 1488 aaKnown RBP17.34■□□□□ 0.37
CSF3R-201ENST00000331941 WASHC2CQ9Y4E1 1318 aa17.34■□□□□ 0.37
CSF3R-201ENST00000331941 PKNOX2Q96KN3 472 aa17.32■□□□□ 0.36
CSF3R-201ENST00000331941 NBPF8Q3BBV2 869 aa17.32■□□□□ 0.36
CSF3R-201ENST00000331941 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
CSF3R-201ENST00000331941 AKNAQ7Z591 1439 aa17.31■□□□□ 0.36
CSF3R-201ENST00000331941 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
CSF3R-201ENST00000331941 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
CSF3R-201ENST00000331941 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
CSF3R-201ENST00000331941 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
CSF3R-201ENST00000331941 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
CSF3R-201ENST00000331941 SPATA31E1Q6ZUB1 1445 aa17.26■□□□□ 0.35
CSF3R-201ENST00000331941 ANKRD30BQ9BXX2 1392 aa17.25■□□□□ 0.35
CSF3R-201ENST00000331941 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
CSF3R-201ENST00000331941 TEX14Q8IWB6 1497 aa17.25■□□□□ 0.35
CSF3R-201ENST00000331941 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
CSF3R-201ENST00000331941 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
CSF3R-201ENST00000331941 MIA2Q96PC5 1412 aa17.21■□□□□ 0.35
CSF3R-201ENST00000331941 POLR1AO95602 1720 aaPredicted RBP17.21■□□□□ 0.35
CSF3R-201ENST00000331941 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
CSF3R-201ENST00000331941 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
CSF3R-201ENST00000331941 CDK13Q14004 1512 aaKnown RBP17.19■□□□□ 0.34
CSF3R-201ENST00000331941 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
CSF3R-201ENST00000331941 NEFMP07197 916 aa17.18■□□□□ 0.34
CSF3R-201ENST00000331941 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
CSF3R-201ENST00000331941 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
CSF3R-201ENST00000331941 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
CSF3R-201ENST00000331941 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
CSF3R-201ENST00000331941 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
CSF3R-201ENST00000331941 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
CSF3R-201ENST00000331941 DAPK1P53355 1430 aa17.15■□□□□ 0.34
CSF3R-201ENST00000331941 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
CSF3R-201ENST00000331941 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
CSF3R-201ENST00000331941 ROCK1Q13464 1354 aa17.14■□□□□ 0.34
CSF3R-201ENST00000331941 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
CSF3R-201ENST00000331941 ABCC5O15440 1437 aa17.13■□□□□ 0.33
CSF3R-201ENST00000331941 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
CSF3R-201ENST00000331941 POLR3GLQ9BT43 218 aa17.12■□□□□ 0.33
CSF3R-201ENST00000331941 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
CSF3R-201ENST00000331941 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
CSF3R-201ENST00000331941 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
CSF3R-201ENST00000331941 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
CSF3R-201ENST00000331941 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
CSF3R-201ENST00000331941 USP47Q96K76 1375 aa17.08■□□□□ 0.33
CSF3R-201ENST00000331941 GSE1Q14687 1217 aa17.08■□□□□ 0.32
CSF3R-201ENST00000331941 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
CSF3R-201ENST00000331941 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
CSF3R-201ENST00000331941 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
CSF3R-201ENST00000331941 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
CSF3R-201ENST00000331941 PZPP20742 1482 aa17.07■□□□□ 0.32
CSF3R-201ENST00000331941 ZNF326Q5BKZ1 582 aaKnown RBP17.07■□□□□ 0.32
CSF3R-201ENST00000331941 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
CSF3R-201ENST00000331941 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
CSF3R-201ENST00000331941 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
CSF3R-201ENST00000331941 KDM5CP41229 1560 aa17.02■□□□□ 0.31
CSF3R-201ENST00000331941 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
CSF3R-201ENST00000331941 KIF14Q15058 1648 aa17■□□□□ 0.31
CSF3R-201ENST00000331941 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
CSF3R-201ENST00000331941 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
CSF3R-201ENST00000331941 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
CSF3R-201ENST00000331941 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
CSF3R-201ENST00000331941 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
CSF3R-201ENST00000331941 PKD2Q13563 968 aa16.96■□□□□ 0.31
CSF3R-201ENST00000331941 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
CSF3R-201ENST00000331941 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.3
CSF3R-201ENST00000331941 ZMYND15Q9H091 742 aa16.95■□□□□ 0.3
CSF3R-201ENST00000331941 NUP153P49790 1475 aaKnown RBP16.95■□□□□ 0.3
CSF3R-201ENST00000331941 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
CSF3R-201ENST00000331941 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
CSF3R-201ENST00000331941 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
CSF3R-201ENST00000331941 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
CSF3R-201ENST00000331941 CAMSAP2Q08AD1 1489 aa16.93■□□□□ 0.3
CSF3R-201ENST00000331941 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
CSF3R-201ENST00000331941 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
CSF3R-201ENST00000331941 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
CSF3R-201ENST00000331941 RALGAPBQ86X10 1494 aa16.92■□□□□ 0.3
CSF3R-201ENST00000331941 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
CSF3R-201ENST00000331941 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms