RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 NACADO15069 1562 aa19.63■□□□□ 0.73
PTPN21-201ENST00000328736 SAFB2Q14151 953 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTPN21-201ENST00000328736 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
PTPN21-201ENST00000328736 SOX12O15370 315 aa19.62■□□□□ 0.73
PTPN21-201ENST00000328736 KIAA2012Q0VF49 1180 aa19.62■□□□□ 0.73
PTPN21-201ENST00000328736 MORC1Q86VD1 984 aa19.62■□□□□ 0.73
PTPN21-201ENST00000328736 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
PTPN21-201ENST00000328736 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
PTPN21-201ENST00000328736 TRHP20396 242 aaPredicted RBP19.6■□□□□ 0.73
PTPN21-201ENST00000328736 TMX4Q9H1E5 349 aaPredicted RBP19.59■□□□□ 0.73
PTPN21-201ENST00000328736 CUX2O14529 1486 aa19.59■□□□□ 0.73
PTPN21-201ENST00000328736 MSNP26038 577 aaKnown RBP19.59■□□□□ 0.73
PTPN21-201ENST00000328736 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.73
PTPN21-201ENST00000328736 HDGFL2Q7Z4V5 671 aaPredicted RBP19.58■□□□□ 0.73
PTPN21-201ENST00000328736 MLECQ14165 292 aa19.58■□□□□ 0.72
PTPN21-201ENST00000328736 KIAA1211Q6ZU35 1233 aa19.57■□□□□ 0.72
PTPN21-201ENST00000328736 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
PTPN21-201ENST00000328736 IPO8O15397 1037 aaKnown RBP19.56■□□□□ 0.72
PTPN21-201ENST00000328736 PTMSP20962 102 aa19.56■□□□□ 0.72
PTPN21-201ENST00000328736 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
PTPN21-201ENST00000328736 CARMIL1Q5VZK9 1371 aa19.55■□□□□ 0.72
PTPN21-201ENST00000328736 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
PTPN21-201ENST00000328736 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
PTPN21-201ENST00000328736 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
PTPN21-201ENST00000328736 HTATSF1O43719 755 aaKnown RBP19.53■□□□□ 0.72
PTPN21-201ENST00000328736 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
PTPN21-201ENST00000328736 CSB-PGBD3P0DP91 1061 aa19.5■□□□□ 0.71
PTPN21-201ENST00000328736 STK26Q9P289 416 aa19.48■□□□□ 0.71
PTPN21-201ENST00000328736 SETD5Q9C0A6 1442 aa19.46■□□□□ 0.71
PTPN21-201ENST00000328736 NOC3LQ8WTT2 800 aaKnown RBP19.46■□□□□ 0.71
PTPN21-201ENST00000328736 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
PTPN21-201ENST00000328736 TPM4P67936 248 aa19.46■□□□□ 0.71
PTPN21-201ENST00000328736 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
PTPN21-201ENST00000328736 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
PTPN21-201ENST00000328736 GPATCH3Q96I76 525 aa19.44■□□□□ 0.7
PTPN21-201ENST00000328736 GBP4Q96PP9 640 aa19.44■□□□□ 0.7
PTPN21-201ENST00000328736 CCDC34Q96HJ3 373 aa19.44■□□□□ 0.7
PTPN21-201ENST00000328736 ARHGAP35Q9NRY4 1499 aa19.44■□□□□ 0.7
PTPN21-201ENST00000328736 PKD2Q13563 968 aa19.44■□□□□ 0.7
PTPN21-201ENST00000328736 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
PTPN21-201ENST00000328736 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
PTPN21-201ENST00000328736 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
PTPN21-201ENST00000328736 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
PTPN21-201ENST00000328736 GORABQ5T7V8 394 aa19.42■□□□□ 0.7
PTPN21-201ENST00000328736 SPAG9O60271 1321 aaKnown RBP19.41■□□□□ 0.7
PTPN21-201ENST00000328736 GGT6Q6P531 493 aa19.41■□□□□ 0.7
PTPN21-201ENST00000328736 SYAP1Q96A49 352 aaPredicted RBP19.41■□□□□ 0.7
PTPN21-201ENST00000328736 APBB1O00213 710 aa19.41■□□□□ 0.7
PTPN21-201ENST00000328736 RWDD1Q9H446 243 aaPredicted RBP19.4■□□□□ 0.7
PTPN21-201ENST00000328736 TAF7LQ5H9L4 462 aa19.39■□□□□ 0.69
PTPN21-201ENST00000328736 STK31Q9BXU1 1019 aa19.39■□□□□ 0.69
PTPN21-201ENST00000328736 EIF3AQ14152 1382 aaKnown RBP19.37■□□□□ 0.69
PTPN21-201ENST00000328736 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
PTPN21-201ENST00000328736 G3V3G9 751 aa19.37■□□□□ 0.69
PTPN21-201ENST00000328736 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
PTPN21-201ENST00000328736 DCAF8Q5TAQ9 597 aa19.37■□□□□ 0.69
PTPN21-201ENST00000328736 PRM3Q9NNZ6 103 aa19.37■□□□□ 0.69
PTPN21-201ENST00000328736 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
PTPN21-201ENST00000328736 CCDC9Q9Y3X0 531 aaKnown RBP19.36■□□□□ 0.69
PTPN21-201ENST00000328736 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
PTPN21-201ENST00000328736 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
PTPN21-201ENST00000328736 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTPN21-201ENST00000328736 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
PTPN21-201ENST00000328736 HSP90B1P14625 803 aaKnown RBP19.34■□□□□ 0.69
PTPN21-201ENST00000328736 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
PTPN21-201ENST00000328736 CHMP3Q9Y3E7 222 aa19.34■□□□□ 0.69
PTPN21-201ENST00000328736 HMMRO75330 724 aa19.33■□□□□ 0.69
PTPN21-201ENST00000328736 PMFBP1Q8TBY8 1022 aa19.33■□□□□ 0.69
PTPN21-201ENST00000328736 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.68
PTPN21-201ENST00000328736 ROCK2O75116 1388 aaKnown RBP19.33■□□□□ 0.68
PTPN21-201ENST00000328736 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
PTPN21-201ENST00000328736 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
PTPN21-201ENST00000328736 RALBP1Q15311 655 aa19.32■□□□□ 0.68
PTPN21-201ENST00000328736 WIZO95785 1651 aa19.3■□□□□ 0.68
PTPN21-201ENST00000328736 RASSF8Q8NHQ8 419 aa19.3■□□□□ 0.68
PTPN21-201ENST00000328736 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
PTPN21-201ENST00000328736 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
PTPN21-201ENST00000328736 A0A0U1RQG5 324 aaPredicted RBP19.28■□□□□ 0.68
PTPN21-201ENST00000328736 TERF2IPQ9NYB0 399 aa19.27■□□□□ 0.68
PTPN21-201ENST00000328736 EID1Q9Y6B2 187 aa19.27■□□□□ 0.68
PTPN21-201ENST00000328736 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.68
PTPN21-201ENST00000328736 TRIM6-TRIM34B2RNG4 842 aa19.26■□□□□ 0.67
PTPN21-201ENST00000328736 CCDC146Q8IYE0 955 aa19.26■□□□□ 0.67
PTPN21-201ENST00000328736 GOLGA6L1Q8N7Z2 621 aa19.26■□□□□ 0.67
PTPN21-201ENST00000328736 CEP89Q96ST8 783 aa19.26■□□□□ 0.67
PTPN21-201ENST00000328736 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
PTPN21-201ENST00000328736 HNRNPMP52272 730 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTPN21-201ENST00000328736 NUP155O75694 1391 aa19.25■□□□□ 0.67
PTPN21-201ENST00000328736 EFCAB2Q5VUJ9 269 aa19.23■□□□□ 0.67
PTPN21-201ENST00000328736 DEKP35659 375 aaKnown RBP19.23■□□□□ 0.67
PTPN21-201ENST00000328736 KIF3AQ9Y496 699 aa19.23■□□□□ 0.67
PTPN21-201ENST00000328736 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
PTPN21-201ENST00000328736 TCERG1O14776 1098 aaKnown RBP19.22■□□□□ 0.67
PTPN21-201ENST00000328736 MARCH6O60337 910 aa19.22■□□□□ 0.67
PTPN21-201ENST00000328736 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
PTPN21-201ENST00000328736 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
PTPN21-201ENST00000328736 FRAT2O75474 233 aaPredicted RBP19.2■□□□□ 0.66
PTPN21-201ENST00000328736 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
PTPN21-201ENST00000328736 TPM3P06753 285 aa19.19■□□□□ 0.66
PTPN21-201ENST00000328736 GTF2E1P29083 439 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms