RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 ANP32CO43423 234 aa28.05■■■□□ 2.08
SOX2-201ENST00000325404 PTPRGP23470 1445 aa28.05■■■□□ 2.08
SOX2-201ENST00000325404 TROQ12816 1431 aaPredicted RBP28.03■■■□□ 2.08
SOX2-201ENST00000325404 CLASP1Q7Z460 1538 aa27.96■■■□□ 2.07
SOX2-201ENST00000325404 ATP10BO94823 1461 aa27.94■■■□□ 2.06
SOX2-201ENST00000325404 DENND4BO75064 1496 aaPredicted RBP27.92■■■□□ 2.06
SOX2-201ENST00000325404 HIRIP3Q9BW71 556 aaPredicted RBP27.91■■■□□ 2.06
SOX2-201ENST00000325404 ADCY10Q96PN6 1610 aa27.9■■■□□ 2.06
SOX2-201ENST00000325404 PLEKHD1A6NEE1 506 aa27.9■■■□□ 2.06
SOX2-201ENST00000325404 ROCK1Q13464 1354 aa27.89■■■□□ 2.06
SOX2-201ENST00000325404 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.05
SOX2-201ENST00000325404 RRP7BPQ9NSQ0 103 aa27.86■■■□□ 2.05
SOX2-201ENST00000325404 KIF14Q15058 1648 aa27.85■■■□□ 2.05
SOX2-201ENST00000325404 ITSN2Q9NZM3 1697 aa27.82■■■□□ 2.04
SOX2-201ENST00000325404 KDM6BO15054 1643 aa27.82■■■□□ 2.04
SOX2-201ENST00000325404 TSHZ2Q9NRE2 1034 aa27.81■■■□□ 2.04
SOX2-201ENST00000325404 GPATCH8Q9UKJ3 1502 aaKnown RBP27.8■■■□□ 2.04
SOX2-201ENST00000325404 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
SOX2-201ENST00000325404 CHIC2Q9UKJ5 165 aa27.79■■■□□ 2.04
SOX2-201ENST00000325404 CFDP1Q9UEE9 299 aaPredicted RBP27.79■■■□□ 2.04
SOX2-201ENST00000325404 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
SOX2-201ENST00000325404 DAPK1P53355 1430 aa27.78■■■□□ 2.04
SOX2-201ENST00000325404 ABCC2Q92887 1545 aa27.77■■■□□ 2.04
SOX2-201ENST00000325404 TRIM52Q96A61 297 aa27.77■■■□□ 2.04
SOX2-201ENST00000325404 ZNF644Q9H582 1327 aaPredicted RBP27.75■■■□□ 2.03
SOX2-201ENST00000325404 NEFLP07196 543 aa27.75■■■□□ 2.03
SOX2-201ENST00000325404 FKBP8Q14318 412 aa27.75■■■□□ 2.03
SOX2-201ENST00000325404 ABCC10Q5T3U5 1492 aa27.74■■■□□ 2.03
SOX2-201ENST00000325404 HSPA5P11021 654 aaKnown RBP27.73■■■□□ 2.03
SOX2-201ENST00000325404 EIF4G2P78344 907 aaKnown RBP eCLIP27.73■■■□□ 2.03
SOX2-201ENST00000325404 CAMSAP2Q08AD1 1489 aa27.73■■■□□ 2.03
SOX2-201ENST00000325404 ABCC5O15440 1437 aa27.72■■■□□ 2.03
SOX2-201ENST00000325404 WASHC2AQ641Q2 1341 aa27.71■■■□□ 2.03
SOX2-201ENST00000325404 ANKRD30BQ9BXX2 1392 aa27.71■■■□□ 2.03
SOX2-201ENST00000325404 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.03
SOX2-201ENST00000325404 CDC42BPAQ5VT25 1732 aa27.66■■■□□ 2.02
SOX2-201ENST00000325404 ZNF777Q9ULD5 760 aaPredicted RBP27.66■■■□□ 2.02
SOX2-201ENST00000325404 UHRF1BP1LA0JNW5 1464 aa27.66■■■□□ 2.02
SOX2-201ENST00000325404 L3MBTL2Q969R5 705 aa27.65■■■□□ 2.02
SOX2-201ENST00000325404 CNTLNQ9NXG0 1405 aa27.65■■■□□ 2.02
SOX2-201ENST00000325404 NCOA1Q15788 1441 aa27.64■■■□□ 2.01
SOX2-201ENST00000325404 TEX14Q8IWB6 1497 aa27.62■■■□□ 2.01
SOX2-201ENST00000325404 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
SOX2-201ENST00000325404 CCDC7Q96M83 1385 aa27.56■■■□□ 2
SOX2-201ENST00000325404 ZCCHC11Q5TAX3 1644 aaKnown RBP27.55■■■□□ 2
SOX2-201ENST00000325404 BCANQ96GW7 911 aa27.55■■■□□ 2
SOX2-201ENST00000325404 ADGRL2O95490 1459 aa27.55■■■□□ 2
SOX2-201ENST00000325404 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
SOX2-201ENST00000325404 ADGBQ8N7X0 1667 aa27.53■■■□□ 2
SOX2-201ENST00000325404 CROCC2H7BZ55 1655 aa27.53■■■□□ 2
SOX2-201ENST00000325404 PREX2Q70Z35 1606 aa27.52■■■□□ 2
SOX2-201ENST00000325404 POLR1AO95602 1720 aaPredicted RBP27.52■■■□□ 2
SOX2-201ENST00000325404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.99
SOX2-201ENST00000325404 PZPP20742 1482 aa27.5■■□□□ 1.99
SOX2-201ENST00000325404 SLC4A1APQ9BWU0 796 aaKnown RBP27.49■■□□□ 1.99
SOX2-201ENST00000325404 TTC37Q6PGP7 1564 aa27.49■■□□□ 1.99
SOX2-201ENST00000325404 HNRNPUQ00839 825 aaKnown RBP eCLIP27.49■■□□□ 1.99
SOX2-201ENST00000325404 FOXD1Q16676 465 aa27.48■■□□□ 1.99
SOX2-201ENST00000325404 SHANK2Q9UPX8 1470 aa27.48■■□□□ 1.99
SOX2-201ENST00000325404 NBPF8Q3BBV2 869 aa27.47■■□□□ 1.99
SOX2-201ENST00000325404 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
SOX2-201ENST00000325404 ERICH6BQ5W0A0 696 aa27.47■■□□□ 1.99
SOX2-201ENST00000325404 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
SOX2-201ENST00000325404 PRKRIP1Q9H875 184 aaPredicted RBP27.45■■□□□ 1.98
SOX2-201ENST00000325404 ARHGEF5Q12774 1597 aa27.44■■□□□ 1.98
SOX2-201ENST00000325404 SAMD9LQ8IVG5 1584 aa27.44■■□□□ 1.98
SOX2-201ENST00000325404 C11orf95C9JLR9 678 aaPredicted RBP27.43■■□□□ 1.98
SOX2-201ENST00000325404 MBD5Q9P267 1494 aa27.43■■□□□ 1.98
SOX2-201ENST00000325404 C9orf84Q5VXU9 1444 aa27.43■■□□□ 1.98
SOX2-201ENST00000325404 ARHGAP5Q13017 1502 aa27.43■■□□□ 1.98
SOX2-201ENST00000325404 KIAA1107Q9UPP5 1409 aa27.42■■□□□ 1.98
SOX2-201ENST00000325404 TSPY4P0CV99 314 aa27.42■■□□□ 1.98
SOX2-201ENST00000325404 TSPY10P0CW01 314 aa27.42■■□□□ 1.98
SOX2-201ENST00000325404 MYO5CQ9NQX4 1742 aa27.41■■□□□ 1.98
SOX2-201ENST00000325404 HNRNPMP52272 730 aaKnown RBP eCLIP27.4■■□□□ 1.98
SOX2-201ENST00000325404 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
SOX2-201ENST00000325404 CCDC141Q6ZP82 1450 aa27.38■■□□□ 1.97
SOX2-201ENST00000325404 KIF7Q2M1P5 1343 aa27.37■■□□□ 1.97
SOX2-201ENST00000325404 PLCH2O75038 1416 aa27.34■■□□□ 1.97
SOX2-201ENST00000325404 ARID4BQ4LE39 1312 aaPredicted RBP27.34■■□□□ 1.97
SOX2-201ENST00000325404 PLEKHH2Q8IVE3 1493 aa27.34■■□□□ 1.97
SOX2-201ENST00000325404 ANKRD50Q9ULJ7 1429 aa27.33■■□□□ 1.97
SOX2-201ENST00000325404 SYCP2Q9BX26 1530 aa27.33■■□□□ 1.97
SOX2-201ENST00000325404 WDR7Q9Y4E6 1490 aa27.32■■□□□ 1.96
SOX2-201ENST00000325404 ANP32EQ9BTT0 268 aa27.31■■□□□ 1.96
SOX2-201ENST00000325404 ZBED9Q6R2W3 1325 aa27.31■■□□□ 1.96
SOX2-201ENST00000325404 RBM19Q9Y4C8 960 aaKnown RBP27.29■■□□□ 1.96
SOX2-201ENST00000325404 UHRF1BP1Q6BDS2 1440 aa27.29■■□□□ 1.96
SOX2-201ENST00000325404 CCDC184Q52MB2 194 aa27.28■■□□□ 1.96
SOX2-201ENST00000325404 KDM5DQ9BY66 1539 aa27.28■■□□□ 1.96
SOX2-201ENST00000325404 KIF15Q9NS87 1388 aa27.28■■□□□ 1.96
SOX2-201ENST00000325404 EFCAB2Q5VUJ9 269 aa27.28■■□□□ 1.96
SOX2-201ENST00000325404 MRS2Q9HD23 443 aa27.27■■□□□ 1.96
SOX2-201ENST00000325404 ARHGEF12Q9NZN5 1544 aa27.24■■□□□ 1.95
SOX2-201ENST00000325404 ARAP3Q8WWN8 1544 aa27.23■■□□□ 1.95
SOX2-201ENST00000325404 MAST1Q9Y2H9 1570 aa27.23■■□□□ 1.95
SOX2-201ENST00000325404 PKD2Q13563 968 aa27.23■■□□□ 1.95
SOX2-201ENST00000325404 USP47Q96K76 1375 aa27.22■■□□□ 1.95
SOX2-201ENST00000325404 ASXL2Q76L83 1435 aa27.22■■□□□ 1.95
SOX2-201ENST00000325404 DHX29Q7Z478 1369 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms