RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 SHANK2Q9UPX8 1470 aa17.48■□□□□ 0.39
NCL-201ENST00000322723 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
NCL-201ENST00000322723 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
NCL-201ENST00000322723 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
NCL-201ENST00000322723 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
NCL-201ENST00000322723 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
NCL-201ENST00000322723 CDC42BPBQ9Y5S2 1711 aa17.45■□□□□ 0.38
NCL-201ENST00000322723 ATP10BO94823 1461 aa17.45■□□□□ 0.38
NCL-201ENST00000322723 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
NCL-201ENST00000322723 PRG4Q92954 1404 aaPredicted RBP17.44■□□□□ 0.38
NCL-201ENST00000322723 KDM5DQ9BY66 1539 aa17.44■□□□□ 0.38
NCL-201ENST00000322723 MIER1Q8N108 512 aa17.44■□□□□ 0.38
NCL-201ENST00000322723 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
NCL-201ENST00000322723 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
NCL-201ENST00000322723 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
NCL-201ENST00000322723 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.38
NCL-201ENST00000322723 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
NCL-201ENST00000322723 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
NCL-201ENST00000322723 PZPP20742 1482 aa17.38■□□□□ 0.37
NCL-201ENST00000322723 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
NCL-201ENST00000322723 SAMD9LQ8IVG5 1584 aa17.36■□□□□ 0.37
NCL-201ENST00000322723 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
NCL-201ENST00000322723 RPRD2Q5VT52 1461 aaKnown RBP17.34■□□□□ 0.37
NCL-201ENST00000322723 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
NCL-201ENST00000322723 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
NCL-201ENST00000322723 UHRF1BP1LA0JNW5 1464 aa17.32■□□□□ 0.36
NCL-201ENST00000322723 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
NCL-201ENST00000322723 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
NCL-201ENST00000322723 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
NCL-201ENST00000322723 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
NCL-201ENST00000322723 TTC37Q6PGP7 1564 aa17.3■□□□□ 0.36
NCL-201ENST00000322723 PLXNC1O60486 1568 aa17.3■□□□□ 0.36
NCL-201ENST00000322723 PTPRGP23470 1445 aa17.29■□□□□ 0.36
NCL-201ENST00000322723 UNC13BO14795 1591 aa17.29■□□□□ 0.36
NCL-201ENST00000322723 ZCCHC11Q5TAX3 1644 aaKnown RBP17.28■□□□□ 0.36
NCL-201ENST00000322723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.27■□□□□ 0.365e-21■□□□□ 9.4
NCL-201ENST00000322723 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
NCL-201ENST00000322723 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
NCL-201ENST00000322723 ARAP3Q8WWN8 1544 aa17.23■□□□□ 0.35
NCL-201ENST00000322723 RRP7BPQ9NSQ0 103 aa17.22■□□□□ 0.35
NCL-201ENST00000322723 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
NCL-201ENST00000322723 MAGI2Q86UL8 1455 aa17.2■□□□□ 0.34
NCL-201ENST00000322723 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
NCL-201ENST00000322723 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
NCL-201ENST00000322723 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
NCL-201ENST00000322723 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
NCL-201ENST00000322723 KIAA1107Q9UPP5 1409 aa17.18■□□□□ 0.34
NCL-201ENST00000322723 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
NCL-201ENST00000322723 ANKRD30AQ9BXX3 1397 aa17.16■□□□□ 0.34
NCL-201ENST00000322723 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
NCL-201ENST00000322723 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
NCL-201ENST00000322723 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.34
NCL-201ENST00000322723 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
NCL-201ENST00000322723 ABCC1P33527 1531 aa17.14■□□□□ 0.33
NCL-201ENST00000322723 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
NCL-201ENST00000322723 KDM5CP41229 1560 aa17.13■□□□□ 0.33
NCL-201ENST00000322723 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
NCL-201ENST00000322723 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
NCL-201ENST00000322723 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
NCL-201ENST00000322723 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
NCL-201ENST00000322723 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
NCL-201ENST00000322723 FBLN2P98095 1184 aa17.11■□□□□ 0.33
NCL-201ENST00000322723 LAMC1P11047 1609 aa17.1■□□□□ 0.33
NCL-201ENST00000322723 FAM135AQ9P2D6 1515 aa17.08■□□□□ 0.32
NCL-201ENST00000322723 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
NCL-201ENST00000322723 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
NCL-201ENST00000322723 E9PCH4 1651 aa17.06■□□□□ 0.32
NCL-201ENST00000322723 ATP10AO60312 1499 aa17.06■□□□□ 0.32
NCL-201ENST00000322723 PLCH2O75038 1416 aa17.05■□□□□ 0.32
NCL-201ENST00000322723 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
NCL-201ENST00000322723 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
NCL-201ENST00000322723 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
NCL-201ENST00000322723 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
NCL-201ENST00000322723 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
NCL-201ENST00000322723 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
NCL-201ENST00000322723 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
NCL-201ENST00000322723 KIF15Q9NS87 1388 aa17.02■□□□□ 0.32
NCL-201ENST00000322723 ERBINQ96RT1 1412 aa17.02■□□□□ 0.31
NCL-201ENST00000322723 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
NCL-201ENST00000322723 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
NCL-201ENST00000322723 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
NCL-201ENST00000322723 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
NCL-201ENST00000322723 TRIM52Q96A61 297 aa17■□□□□ 0.31
NCL-201ENST00000322723 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
NCL-201ENST00000322723 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
NCL-201ENST00000322723 NEURL4Q96JN8 1562 aa16.99■□□□□ 0.31
NCL-201ENST00000322723 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
NCL-201ENST00000322723 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
NCL-201ENST00000322723 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
NCL-201ENST00000322723 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
NCL-201ENST00000322723 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
NCL-201ENST00000322723 CEP152O94986 1710 aa16.96■□□□□ 0.31
NCL-201ENST00000322723 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
NCL-201ENST00000322723 FOXD1Q16676 465 aa16.96■□□□□ 0.31
NCL-201ENST00000322723 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
NCL-201ENST00000322723 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
NCL-201ENST00000322723 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
NCL-201ENST00000322723 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
NCL-201ENST00000322723 KCNH8Q96L42 1107 aa16.93■□□□□ 0.3
NCL-201ENST00000322723 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms