RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 SCAPERQ9BY12 1400 aa30.04■■■□□ 2.4
SWI5-201ENST00000320188 PLCH2O75038 1416 aa30.03■■■□□ 2.4
SWI5-201ENST00000320188 MLECQ14165 292 aa30.02■■■□□ 2.4
SWI5-201ENST00000320188 PREX1Q8TCU6 1659 aa30.01■■■□□ 2.39
SWI5-201ENST00000320188 C9orf84Q5VXU9 1444 aa29.98■■■□□ 2.39
SWI5-201ENST00000320188 ARHGEF12Q9NZN5 1544 aa29.97■■■□□ 2.39
SWI5-201ENST00000320188 ATP10AO60312 1499 aa29.97■■■□□ 2.39
SWI5-201ENST00000320188 FMN1Q68DA7 1419 aa29.95■■■□□ 2.38
SWI5-201ENST00000320188 KIF14Q15058 1648 aa29.93■■■□□ 2.38
SWI5-201ENST00000320188 CERKQ8TCT0 537 aa29.92■■■□□ 2.38
SWI5-201ENST00000320188 EFCAB2Q5VUJ9 269 aa29.91■■■□□ 2.38
SWI5-201ENST00000320188 CDK11AQ9UQ88 783 aaPredicted RBP29.91■■■□□ 2.38
SWI5-201ENST00000320188 ATP1B4Q9UN42 357 aaPredicted RBP29.9■■■□□ 2.38
SWI5-201ENST00000320188 ZNF518AQ6AHZ1 1483 aa29.9■■■□□ 2.38
SWI5-201ENST00000320188 SETD1BQ9UPS6 1966 aaKnown RBP29.87■■■□□ 2.37
SWI5-201ENST00000320188 ARHGAP5Q13017 1502 aa29.86■■■□□ 2.37
SWI5-201ENST00000320188 KDM5CP41229 1560 aa29.84■■■□□ 2.37
SWI5-201ENST00000320188 CLIP1P30622 1438 aa29.83■■■□□ 2.37
SWI5-201ENST00000320188 UBTFP17480 764 aaKnown RBP29.82■■■□□ 2.36
SWI5-201ENST00000320188 TROQ12816 1431 aaPredicted RBP29.8■■■□□ 2.36
SWI5-201ENST00000320188 STRCQ7RTU9 1775 aa29.79■■■□□ 2.36
SWI5-201ENST00000320188 ARHGAP35Q9NRY4 1499 aa29.79■■■□□ 2.36
SWI5-201ENST00000320188 UHRF1BP1Q6BDS2 1440 aa29.79■■■□□ 2.36
SWI5-201ENST00000320188 MYT1LQ9UL68 1186 aa29.78■■■□□ 2.36
SWI5-201ENST00000320188 DIP2CQ9Y2E4 1556 aa29.77■■■□□ 2.36
SWI5-201ENST00000320188 DMRT2Q9Y5R5 561 aa29.77■■■□□ 2.36
SWI5-201ENST00000320188 REREQ9P2R6 1566 aa29.77■■■□□ 2.36
SWI5-201ENST00000320188 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
SWI5-201ENST00000320188 LRRIQ1Q96JM4 1722 aa29.76■■■□□ 2.35
SWI5-201ENST00000320188 CDC42BPBQ9Y5S2 1711 aa29.76■■■□□ 2.35
SWI5-201ENST00000320188 EHMT2Q96KQ7 1210 aa29.74■■■□□ 2.35
SWI5-201ENST00000320188 ABCA6Q8N139 1617 aa29.73■■■□□ 2.35
SWI5-201ENST00000320188 C3P01024 1663 aa29.72■■■□□ 2.35
SWI5-201ENST00000320188 AFAP1Q8N556 730 aa29.71■■■□□ 2.35
SWI5-201ENST00000320188 PREX2Q70Z35 1606 aa29.71■■■□□ 2.35
SWI5-201ENST00000320188 ITSN2Q9NZM3 1697 aa29.69■■■□□ 2.34
SWI5-201ENST00000320188 MLH3Q9UHC1 1453 aa29.68■■■□□ 2.34
SWI5-201ENST00000320188 ABCC1P33527 1531 aa29.66■■■□□ 2.34
SWI5-201ENST00000320188 ESF1Q9H501 851 aaKnown RBP29.66■■■□□ 2.34
SWI5-201ENST00000320188 AGLP35573 1532 aa29.65■■■□□ 2.34
SWI5-201ENST00000320188 CCDC18Q5T9S5 1454 aa29.62■■■□□ 2.33
SWI5-201ENST00000320188 PTPRTO14522 1441 aa29.6■■■□□ 2.33
SWI5-201ENST00000320188 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
SWI5-201ENST00000320188 KIDINS220Q9ULH0 1771 aa29.59■■■□□ 2.33
SWI5-201ENST00000320188 TRAPPC8Q9Y2L5 1435 aa29.57■■■□□ 2.32
SWI5-201ENST00000320188 DISP3Q9P2K9 1392 aa29.57■■■□□ 2.32
SWI5-201ENST00000320188 CNTLNQ9NXG0 1405 aa29.56■■■□□ 2.32
SWI5-201ENST00000320188 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
SWI5-201ENST00000320188 CASKIN1Q8WXD9 1431 aa29.53■■■□□ 2.32
SWI5-201ENST00000320188 SPATA31D1Q6ZQQ2 1576 aa29.48■■■□□ 2.31
SWI5-201ENST00000320188 NCOA1Q15788 1441 aa29.47■■■□□ 2.31
SWI5-201ENST00000320188 IQSEC2Q5JU85 1478 aa29.47■■■□□ 2.31
SWI5-201ENST00000320188 SAMD9LQ8IVG5 1584 aa29.46■■■□□ 2.31
SWI5-201ENST00000320188 LTBP4Q8N2S1 1624 aa29.45■■■□□ 2.3
SWI5-201ENST00000320188 SUPT6HQ7KZ85 1726 aaKnown RBP29.44■■■□□ 2.3
SWI5-201ENST00000320188 NPATQ14207 1427 aa29.44■■■□□ 2.3
SWI5-201ENST00000320188 FYCO1Q9BQS8 1478 aa29.43■■■□□ 2.3
SWI5-201ENST00000320188 CAMSAP1Q5T5Y3 1602 aa29.42■■■□□ 2.3
SWI5-201ENST00000320188 SYCP2Q9BX26 1530 aa29.42■■■□□ 2.3
SWI5-201ENST00000320188 ILDR2Q71H61 639 aa29.39■■■□□ 2.3
SWI5-201ENST00000320188 SOCS7O14512 581 aa29.38■■■□□ 2.29
SWI5-201ENST00000320188 ZNF777Q9ULD5 760 aaPredicted RBP29.38■■■□□ 2.29
SWI5-201ENST00000320188 CLTCQ00610 1675 aaKnown RBP29.37■■■□□ 2.29
SWI5-201ENST00000320188 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
SWI5-201ENST00000320188 ATP7AQ04656 1500 aa29.36■■■□□ 2.29
SWI5-201ENST00000320188 SPAG9O60271 1321 aaKnown RBP29.36■■■□□ 2.29
SWI5-201ENST00000320188 MYO3AQ8NEV4 1616 aa29.34■■■□□ 2.29
SWI5-201ENST00000320188 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
SWI5-201ENST00000320188 ZMYM3Q14202 1370 aa29.33■■■□□ 2.29
SWI5-201ENST00000320188 PLEKHH2Q8IVE3 1493 aa29.33■■■□□ 2.29
SWI5-201ENST00000320188 INO80Q9ULG1 1556 aaPredicted RBP29.33■■■□□ 2.29
SWI5-201ENST00000320188 PLXNC1O60486 1568 aa29.31■■■□□ 2.28
SWI5-201ENST00000320188 GPATCH8Q9UKJ3 1502 aaKnown RBP29.31■■■□□ 2.28
SWI5-201ENST00000320188 A2MP01023 1474 aa29.28■■■□□ 2.28
SWI5-201ENST00000320188 KIAA1107Q9UPP5 1409 aa29.28■■■□□ 2.28
SWI5-201ENST00000320188 ADGBQ8N7X0 1667 aa29.28■■■□□ 2.28
SWI5-201ENST00000320188 PLA2R1Q13018 1463 aa29.27■■■□□ 2.28
SWI5-201ENST00000320188 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.28
SWI5-201ENST00000320188 HNRNPMP52272 730 aaKnown RBP eCLIP29.26■■■□□ 2.27
SWI5-201ENST00000320188 CFDP1Q9UEE9 299 aaPredicted RBP29.23■■■□□ 2.27
SWI5-201ENST00000320188 CCNB3Q8WWL7 1395 aa29.23■■■□□ 2.27
SWI5-201ENST00000320188 NCKAP5LQ9HCH0 1330 aa29.22■■■□□ 2.27
SWI5-201ENST00000320188 PKD2Q13563 968 aa29.22■■■□□ 2.27
SWI5-201ENST00000320188 PTPRKQ15262 1439 aa29.2■■■□□ 2.27
SWI5-201ENST00000320188 ZNF335Q9H4Z2 1342 aaPredicted RBP29.2■■■□□ 2.26
SWI5-201ENST00000320188 TCOF1Q13428 1488 aaKnown RBP29.18■■■□□ 2.26
SWI5-201ENST00000320188 GGT6Q6P531 493 aa29.17■■■□□ 2.26
SWI5-201ENST00000320188 MTUS2Q5JR59 1369 aa29.16■■■□□ 2.26
SWI5-201ENST00000320188 UBAP1LF5GYI3 381 aa29.16■■■□□ 2.26
SWI5-201ENST00000320188 PPP6R1Q9UPN7 881 aa29.15■■■□□ 2.26
SWI5-201ENST00000320188 POLR1AO95602 1720 aaPredicted RBP29.12■■■□□ 2.25
SWI5-201ENST00000320188 TIAM1Q13009 1591 aa29.1■■■□□ 2.25
SWI5-201ENST00000320188 A2ML1A8K2U0 1454 aa29.1■■■□□ 2.25
SWI5-201ENST00000320188 DNMT1P26358 1616 aaKnown RBP29.09■■■□□ 2.25
SWI5-201ENST00000320188 EHBP1L1Q8N3D4 1523 aa29.08■■■□□ 2.25
SWI5-201ENST00000320188 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
SWI5-201ENST00000320188 FAM135AQ9P2D6 1515 aa29.02■■■□□ 2.24
SWI5-201ENST00000320188 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
SWI5-201ENST00000320188 CPS1P31327 1500 aa28.99■■■□□ 2.23
SWI5-201ENST00000320188 KDM5DQ9BY66 1539 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms