RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 HTATSF1O43719 755 aaKnown RBP24.09■■□□□ 1.45
UBE2N-201ENST00000318066 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
UBE2N-201ENST00000318066 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
UBE2N-201ENST00000318066 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.44
UBE2N-201ENST00000318066 SYAP1Q96A49 352 aaPredicted RBP24.07■■□□□ 1.44
UBE2N-201ENST00000318066 KIAA2012Q0VF49 1180 aa24.06■■□□□ 1.44
UBE2N-201ENST00000318066 RCAN3Q9UKA8 241 aa24.06■■□□□ 1.44
UBE2N-201ENST00000318066 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
UBE2N-201ENST00000318066 PDE3BQ13370 1112 aa24.04■■□□□ 1.44
UBE2N-201ENST00000318066 TPRNQ4KMQ1 711 aa24.04■■□□□ 1.44
UBE2N-201ENST00000318066 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
UBE2N-201ENST00000318066 PMFBP1Q8TBY8 1022 aa24.04■■□□□ 1.44
UBE2N-201ENST00000318066 KIAA1211Q6ZU35 1233 aa24.02■■□□□ 1.44
UBE2N-201ENST00000318066 DRC7Q8IY82 874 aa24■■□□□ 1.43
UBE2N-201ENST00000318066 GOLGA2Q08379 1002 aa24■■□□□ 1.43
UBE2N-201ENST00000318066 HDAC5Q9UQL6 1122 aa24■■□□□ 1.43
UBE2N-201ENST00000318066 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
UBE2N-201ENST00000318066 NAP1L2Q9ULW6 460 aaPredicted RBP23.98■■□□□ 1.43
UBE2N-201ENST00000318066 HDGFL2Q7Z4V5 671 aaPredicted RBP23.98■■□□□ 1.43
UBE2N-201ENST00000318066 TSHZ2Q9NRE2 1034 aa23.98■■□□□ 1.43
UBE2N-201ENST00000318066 ROCK2O75116 1388 aaKnown RBP23.97■■□□□ 1.43
UBE2N-201ENST00000318066 PHLDB1Q86UU1 1377 aa23.96■■□□□ 1.43
UBE2N-201ENST00000318066 SRPK2P78362 688 aaKnown RBP23.96■■□□□ 1.43
UBE2N-201ENST00000318066 IPO9Q96P70 1041 aaKnown RBP23.94■■□□□ 1.42
UBE2N-201ENST00000318066 PLEKHG5O94827 1062 aa23.94■■□□□ 1.42
UBE2N-201ENST00000318066 USP35Q9P2H5 1018 aa23.93■■□□□ 1.42
UBE2N-201ENST00000318066 EIF3AQ14152 1382 aaKnown RBP23.92■■□□□ 1.42
UBE2N-201ENST00000318066 CUX2O14529 1486 aa23.92■■□□□ 1.42
UBE2N-201ENST00000318066 CSPP1Q1MSJ5 1256 aa23.92■■□□□ 1.42
UBE2N-201ENST00000318066 CCDC34Q96HJ3 373 aa23.92■■□□□ 1.42
UBE2N-201ENST00000318066 PKD2Q13563 968 aa23.91■■□□□ 1.42
UBE2N-201ENST00000318066 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
UBE2N-201ENST00000318066 FMN1Q68DA7 1419 aa23.91■■□□□ 1.42
UBE2N-201ENST00000318066 GOLGA6L3A6NEY3 463 aa23.89■■□□□ 1.42
UBE2N-201ENST00000318066 LMOD2Q6P5Q4 547 aa23.89■■□□□ 1.41
UBE2N-201ENST00000318066 TPM4P67936 248 aa23.88■■□□□ 1.41
UBE2N-201ENST00000318066 NPHP1O15259 732 aa23.88■■□□□ 1.41
UBE2N-201ENST00000318066 HMMRO75330 724 aa23.87■■□□□ 1.41
UBE2N-201ENST00000318066 GNL2Q13823 731 aaKnown RBP23.87■■□□□ 1.41
UBE2N-201ENST00000318066 NLRP13Q86W25 1043 aa23.86■■□□□ 1.41
UBE2N-201ENST00000318066 ANKRD30AQ9BXX3 1397 aa23.86■■□□□ 1.41
UBE2N-201ENST00000318066 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
UBE2N-201ENST00000318066 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.84■■□□□ 1.41
UBE2N-201ENST00000318066 MPHOSPH9Q99550 1183 aa23.84■■□□□ 1.41
UBE2N-201ENST00000318066 SOGA1O94964 1423 aa23.84■■□□□ 1.41
UBE2N-201ENST00000318066 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
UBE2N-201ENST00000318066 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.41
UBE2N-201ENST00000318066 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.41
UBE2N-201ENST00000318066 ITPRIPQ8IWB1 547 aa23.82■■□□□ 1.4
UBE2N-201ENST00000318066 PHF14O94880 888 aa23.8■■□□□ 1.4
UBE2N-201ENST00000318066 GPATCH3Q96I76 525 aa23.8■■□□□ 1.4
UBE2N-201ENST00000318066 SPRYD3Q8NCJ5 442 aa23.8■■□□□ 1.4
UBE2N-201ENST00000318066 RSPH4AQ5TD94 716 aa23.8■■□□□ 1.4
UBE2N-201ENST00000318066 LMOD3Q0VAK6 560 aa23.79■■□□□ 1.4
UBE2N-201ENST00000318066 STK31Q9BXU1 1019 aa23.78■■□□□ 1.4
UBE2N-201ENST00000318066 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
UBE2N-201ENST00000318066 SLKQ9H2G2 1235 aaPredicted RBP23.78■■□□□ 1.4
UBE2N-201ENST00000318066 SPAG9O60271 1321 aaKnown RBP23.77■■□□□ 1.4
UBE2N-201ENST00000318066 NUP155O75694 1391 aa23.76■■□□□ 1.39
UBE2N-201ENST00000318066 DDX11L8A8MPP1 907 aa23.75■■□□□ 1.39
UBE2N-201ENST00000318066 CHMP4CQ96CF2 233 aa23.75■■□□□ 1.39
UBE2N-201ENST00000318066 KIF3AQ9Y496 699 aa23.75■■□□□ 1.39
UBE2N-201ENST00000318066 TULP1O00294 542 aaPredicted RBP23.75■■□□□ 1.39
UBE2N-201ENST00000318066 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
UBE2N-201ENST00000318066 TERF2IPQ9NYB0 399 aa23.74■■□□□ 1.39
UBE2N-201ENST00000318066 TAOK2Q9UL54 1235 aa23.73■■□□□ 1.39
UBE2N-201ENST00000318066 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
UBE2N-201ENST00000318066 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
UBE2N-201ENST00000318066 EFCAB2Q5VUJ9 269 aa23.72■■□□□ 1.39
UBE2N-201ENST00000318066 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
UBE2N-201ENST00000318066 ST18O60284 1047 aa23.72■■□□□ 1.39
UBE2N-201ENST00000318066 KIF15Q9NS87 1388 aa23.7■■□□□ 1.38
UBE2N-201ENST00000318066 SKOR2Q2VWA4 1001 aaPredicted RBP23.69■■□□□ 1.38
UBE2N-201ENST00000318066 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
UBE2N-201ENST00000318066 GZF1Q9H116 711 aaPredicted RBP23.69■■□□□ 1.38
UBE2N-201ENST00000318066 MFAP1P55081 439 aaKnown RBP23.69■■□□□ 1.38
UBE2N-201ENST00000318066 CENPQQ7L2Z9 268 aaPredicted RBP23.69■■□□□ 1.38
UBE2N-201ENST00000318066 NGEFQ8N5V2 710 aa23.69■■□□□ 1.38
UBE2N-201ENST00000318066 GOLGA6L1Q8N7Z2 621 aa23.67■■□□□ 1.38
UBE2N-201ENST00000318066 APBB1O00213 710 aa23.65■■□□□ 1.38
UBE2N-201ENST00000318066 MYBBP1AQ9BQG0 1328 aaKnown RBP23.65■■□□□ 1.38
UBE2N-201ENST00000318066 RSPH6AQ9H0K4 717 aa23.64■■□□□ 1.38
UBE2N-201ENST00000318066 ATP6V1DQ9Y5K8 247 aa23.63■■□□□ 1.37
UBE2N-201ENST00000318066 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
UBE2N-201ENST00000318066 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
UBE2N-201ENST00000318066 TNNT3P45378 269 aaPredicted RBP23.62■■□□□ 1.37
UBE2N-201ENST00000318066 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
UBE2N-201ENST00000318066 SAFB2Q14151 953 aaKnown RBP eCLIP23.6■■□□□ 1.37
UBE2N-201ENST00000318066 GGT6Q6P531 493 aa23.6■■□□□ 1.37
UBE2N-201ENST00000318066 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
UBE2N-201ENST00000318066 KIF16BQ96L93 1317 aa23.59■■□□□ 1.37
UBE2N-201ENST00000318066 NOC3LQ8WTT2 800 aaKnown RBP23.59■■□□□ 1.37
UBE2N-201ENST00000318066 TRIM6-TRIM34B2RNG4 842 aa23.58■■□□□ 1.37
UBE2N-201ENST00000318066 CCDC18Q5T9S5 1454 aa23.58■■□□□ 1.37
UBE2N-201ENST00000318066 SOX12O15370 315 aa23.58■■□□□ 1.36
UBE2N-201ENST00000318066 GORABQ5T7V8 394 aa23.57■■□□□ 1.36
UBE2N-201ENST00000318066 STK26Q9P289 416 aa23.57■■□□□ 1.36
UBE2N-201ENST00000318066 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
UBE2N-201ENST00000318066 ZBED9Q6R2W3 1325 aa23.57■■□□□ 1.36
UBE2N-201ENST00000318066 FOXD1Q16676 465 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms