RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
CACFD1-202ENST00000316948 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
CACFD1-202ENST00000316948 MYT1LQ9UL68 1186 aa22.31■■□□□ 1.16
CACFD1-202ENST00000316948 C11orf95C9JLR9 678 aaPredicted RBP22.31■■□□□ 1.16
CACFD1-202ENST00000316948 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
CACFD1-202ENST00000316948 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
CACFD1-202ENST00000316948 CNTLNQ9NXG0 1405 aa22.29■■□□□ 1.16
CACFD1-202ENST00000316948 NOP58Q9Y2X3 529 aaKnown RBP22.28■■□□□ 1.16
CACFD1-202ENST00000316948 CNGB1Q14028 1251 aaPredicted RBP22.27■■□□□ 1.16
CACFD1-202ENST00000316948 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
CACFD1-202ENST00000316948 ZBED9Q6R2W3 1325 aa22.26■■□□□ 1.15
CACFD1-202ENST00000316948 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
CACFD1-202ENST00000316948 AKNAQ7Z591 1439 aa22.25■■□□□ 1.15
CACFD1-202ENST00000316948 MIA2Q96PC5 1412 aa22.22■■□□□ 1.15
CACFD1-202ENST00000316948 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
CACFD1-202ENST00000316948 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
CACFD1-202ENST00000316948 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
CACFD1-202ENST00000316948 WDR62O43379 1518 aa22.2■■□□□ 1.14
CACFD1-202ENST00000316948 ZNF644Q9H582 1327 aaPredicted RBP22.19■■□□□ 1.14
CACFD1-202ENST00000316948 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
CACFD1-202ENST00000316948 NCOA1Q15788 1441 aa22.16■■□□□ 1.14
CACFD1-202ENST00000316948 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
CACFD1-202ENST00000316948 ANKRD30BQ9BXX2 1392 aa22.15■■□□□ 1.14
CACFD1-202ENST00000316948 DAPK1P53355 1430 aa22.15■■□□□ 1.14
CACFD1-202ENST00000316948 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
CACFD1-202ENST00000316948 CCDC136Q96JN2 1154 aa22.13■■□□□ 1.13
CACFD1-202ENST00000316948 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
CACFD1-202ENST00000316948 ABCC5O15440 1437 aa22.12■■□□□ 1.13
CACFD1-202ENST00000316948 KIF7Q2M1P5 1343 aa22.11■■□□□ 1.13
CACFD1-202ENST00000316948 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
CACFD1-202ENST00000316948 ANP32AP39687 249 aaKnown RBP22.1■■□□□ 1.13
CACFD1-202ENST00000316948 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
CACFD1-202ENST00000316948 ROCK1Q13464 1354 aa22.09■■□□□ 1.13
CACFD1-202ENST00000316948 IPO9Q96P70 1041 aaKnown RBP22.06■■□□□ 1.12
CACFD1-202ENST00000316948 DNMT1P26358 1616 aaKnown RBP22.06■■□□□ 1.12
CACFD1-202ENST00000316948 ZBTB47Q9UFB7 747 aaPredicted RBP22.05■■□□□ 1.12
CACFD1-202ENST00000316948 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
CACFD1-202ENST00000316948 NUDCQ9Y266 331 aa22.04■■□□□ 1.12
CACFD1-202ENST00000316948 SPATA31E1Q6ZUB1 1445 aa22.04■■□□□ 1.12
CACFD1-202ENST00000316948 NUP153P49790 1475 aaKnown RBP22.04■■□□□ 1.12
CACFD1-202ENST00000316948 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
CACFD1-202ENST00000316948 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
CACFD1-202ENST00000316948 DISP1Q96F81 1524 aa22.02■■□□□ 1.12
CACFD1-202ENST00000316948 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
CACFD1-202ENST00000316948 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
CACFD1-202ENST00000316948 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
CACFD1-202ENST00000316948 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
CACFD1-202ENST00000316948 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
CACFD1-202ENST00000316948 KIAA0586Q9BVV6 1533 aa21.97■■□□□ 1.11
CACFD1-202ENST00000316948 PZPP20742 1482 aa21.97■■□□□ 1.11
CACFD1-202ENST00000316948 CFDP1Q9UEE9 299 aaPredicted RBP21.97■■□□□ 1.11
CACFD1-202ENST00000316948 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
CACFD1-202ENST00000316948 RAPGEF6Q8TEU7 1601 aa21.96■■□□□ 1.11
CACFD1-202ENST00000316948 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
CACFD1-202ENST00000316948 CAMSAP2Q08AD1 1489 aa21.93■■□□□ 1.1
CACFD1-202ENST00000316948 RNF123Q5XPI4 1314 aa21.93■■□□□ 1.1
CACFD1-202ENST00000316948 PKD2Q13563 968 aa21.91■■□□□ 1.1
CACFD1-202ENST00000316948 USP47Q96K76 1375 aa21.9■■□□□ 1.1
CACFD1-202ENST00000316948 TROQ12816 1431 aaPredicted RBP21.89■■□□□ 1.1
CACFD1-202ENST00000316948 DHX29Q7Z478 1369 aaKnown RBP21.89■■□□□ 1.1
CACFD1-202ENST00000316948 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
CACFD1-202ENST00000316948 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
CACFD1-202ENST00000316948 ANO8Q9HCE9 1232 aaPredicted RBP21.88■■□□□ 1.09
CACFD1-202ENST00000316948 BCORL1Q5H9F3 1711 aa21.88■■□□□ 1.09
CACFD1-202ENST00000316948 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
CACFD1-202ENST00000316948 PLB1Q6P1J6 1458 aa21.88■■□□□ 1.09
CACFD1-202ENST00000316948 KIAA1107Q9UPP5 1409 aa21.87■■□□□ 1.09
CACFD1-202ENST00000316948 GPATCH8Q9UKJ3 1502 aaKnown RBP21.87■■□□□ 1.09
CACFD1-202ENST00000316948 MBD5Q9P267 1494 aa21.86■■□□□ 1.09
CACFD1-202ENST00000316948 KIF14Q15058 1648 aa21.85■■□□□ 1.09
CACFD1-202ENST00000316948 PRKCSHP14314 528 aaPredicted RBP21.85■■□□□ 1.09
CACFD1-202ENST00000316948 PNISRQ8TF01 805 aaKnown RBP21.85■■□□□ 1.09
CACFD1-202ENST00000316948 LAS1LQ9Y4W2 734 aaKnown RBP21.85■■□□□ 1.09
CACFD1-202ENST00000316948 FBLN2P98095 1184 aa21.84■■□□□ 1.09
CACFD1-202ENST00000316948 IL27Q8NEV9 243 aa21.84■■□□□ 1.09
CACFD1-202ENST00000316948 RTN4Q9NQC3 1192 aaKnown RBP21.83■■□□□ 1.08
CACFD1-202ENST00000316948 ADGBQ8N7X0 1667 aa21.83■■□□□ 1.08
CACFD1-202ENST00000316948 SALL2Q9Y467 1007 aaPredicted RBP21.82■■□□□ 1.08
CACFD1-202ENST00000316948 EXOC6Q8TAG9 804 aa21.82■■□□□ 1.08
CACFD1-202ENST00000316948 ITSN2Q9NZM3 1697 aa21.81■■□□□ 1.08
CACFD1-202ENST00000316948 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
CACFD1-202ENST00000316948 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
CACFD1-202ENST00000316948 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
CACFD1-202ENST00000316948 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
CACFD1-202ENST00000316948 ADGRL2O95490 1459 aa21.78■■□□□ 1.08
CACFD1-202ENST00000316948 NEFMP07197 916 aa21.78■■□□□ 1.08
CACFD1-202ENST00000316948 KDM5CP41229 1560 aa21.78■■□□□ 1.08
CACFD1-202ENST00000316948 NUP155O75694 1391 aa21.77■■□□□ 1.08
CACFD1-202ENST00000316948 RRP1P56182 461 aaKnown RBP21.76■■□□□ 1.07
CACFD1-202ENST00000316948 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
CACFD1-202ENST00000316948 KDM2AQ9Y2K7 1162 aa21.76■■□□□ 1.07
CACFD1-202ENST00000316948 CROCC2H7BZ55 1655 aa21.76■■□□□ 1.07
CACFD1-202ENST00000316948 PDE4AP27815 886 aa21.76■■□□□ 1.07
CACFD1-202ENST00000316948 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
CACFD1-202ENST00000316948 TCERG1O14776 1098 aaKnown RBP21.73■■□□□ 1.07
CACFD1-202ENST00000316948 ADCY10Q96PN6 1610 aa21.72■■□□□ 1.07
CACFD1-202ENST00000316948 RCAN3Q9UKA8 241 aa21.71■■□□□ 1.07
CACFD1-202ENST00000316948 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
CACFD1-202ENST00000316948 JPH4Q96JJ6 628 aa21.7■■□□□ 1.07
CACFD1-202ENST00000316948 ARID4BQ4LE39 1312 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms