RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
EDC3-201ENST00000315127 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
EDC3-201ENST00000315127 EPRSP07814 1512 aaKnown RBP19.26■□□□□ 0.67
EDC3-201ENST00000315127 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
EDC3-201ENST00000315127 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
EDC3-201ENST00000315127 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
EDC3-201ENST00000315127 SAFB2Q14151 953 aaKnown RBP eCLIP19.24■□□□□ 0.67
EDC3-201ENST00000315127 ESF1Q9H501 851 aaKnown RBP19.24■□□□□ 0.67
EDC3-201ENST00000315127 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
EDC3-201ENST00000315127 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
EDC3-201ENST00000315127 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
EDC3-201ENST00000315127 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
EDC3-201ENST00000315127 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
EDC3-201ENST00000315127 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
EDC3-201ENST00000315127 CUL7Q14999 1698 aa19.18■□□□□ 0.66
EDC3-201ENST00000315127 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
EDC3-201ENST00000315127 TNNT2P45379 298 aaPredicted RBP19.17■□□□□ 0.66
EDC3-201ENST00000315127 NBPF8Q3BBV2 869 aa19.16■□□□□ 0.66
EDC3-201ENST00000315127 NAIPQ13075 1403 aa19.16■□□□□ 0.66
EDC3-201ENST00000315127 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
EDC3-201ENST00000315127 ST20-MTHFSA0A0A6YYL1 179 aa19.15■□□□□ 0.66
EDC3-201ENST00000315127 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
EDC3-201ENST00000315127 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
EDC3-201ENST00000315127 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
EDC3-201ENST00000315127 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
EDC3-201ENST00000315127 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
EDC3-201ENST00000315127 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
EDC3-201ENST00000315127 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
EDC3-201ENST00000315127 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
EDC3-201ENST00000315127 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
EDC3-201ENST00000315127 STK26Q9P289 416 aa19.1■□□□□ 0.65
EDC3-201ENST00000315127 HFM1A2PYH4 1435 aa19.08■□□□□ 0.65
EDC3-201ENST00000315127 WDR97A6NE52 1622 aa19.08■□□□□ 0.64
EDC3-201ENST00000315127 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
EDC3-201ENST00000315127 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
EDC3-201ENST00000315127 RAPGEF3O95398 923 aa19.04■□□□□ 0.64
EDC3-201ENST00000315127 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
EDC3-201ENST00000315127 DAPK1P53355 1430 aa19.04■□□□□ 0.64
EDC3-201ENST00000315127 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
EDC3-201ENST00000315127 HECW1Q76N89 1606 aa19.03■□□□□ 0.64
EDC3-201ENST00000315127 NBPF1Q3BBV0 1214 aa19.03■□□□□ 0.64
EDC3-201ENST00000315127 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
EDC3-201ENST00000315127 NUP153P49790 1475 aaKnown RBP19.02■□□□□ 0.64
EDC3-201ENST00000315127 ABCC5O15440 1437 aa19.02■□□□□ 0.64
EDC3-201ENST00000315127 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
EDC3-201ENST00000315127 NEUROD2Q15784 382 aa19.01■□□□□ 0.63
EDC3-201ENST00000315127 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
EDC3-201ENST00000315127 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
EDC3-201ENST00000315127 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
EDC3-201ENST00000315127 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
EDC3-201ENST00000315127 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
EDC3-201ENST00000315127 FAM69CQ0P6D2 419 aa18.98■□□□□ 0.63
EDC3-201ENST00000315127 CCDC184Q52MB2 194 aa18.98■□□□□ 0.63
EDC3-201ENST00000315127 C9orf84Q5VXU9 1444 aa18.98■□□□□ 0.63
EDC3-201ENST00000315127 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
EDC3-201ENST00000315127 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
EDC3-201ENST00000315127 KNSTRNQ9Y448 316 aa18.97■□□□□ 0.63
EDC3-201ENST00000315127 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
EDC3-201ENST00000315127 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
EDC3-201ENST00000315127 CCDC144AA2RUR9 1427 aa18.97■□□□□ 0.63
EDC3-201ENST00000315127 MIA2Q96PC5 1412 aa18.96■□□□□ 0.63
EDC3-201ENST00000315127 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
EDC3-201ENST00000315127 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
EDC3-201ENST00000315127 USP47Q96K76 1375 aa18.95■□□□□ 0.62
EDC3-201ENST00000315127 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
EDC3-201ENST00000315127 ATP10BO94823 1461 aa18.94■□□□□ 0.62
EDC3-201ENST00000315127 SCAPERQ9BY12 1400 aa18.94■□□□□ 0.62
EDC3-201ENST00000315127 KANK1Q14678 1352 aa18.94■□□□□ 0.62
EDC3-201ENST00000315127 CTTNBP2Q8WZ74 1663 aa18.94■□□□□ 0.62
EDC3-201ENST00000315127 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
EDC3-201ENST00000315127 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
EDC3-201ENST00000315127 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
EDC3-201ENST00000315127 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
EDC3-201ENST00000315127 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
EDC3-201ENST00000315127 MAPKBP1O60336 1514 aa18.92■□□□□ 0.62
EDC3-201ENST00000315127 TMF1P82094 1093 aa18.92■□□□□ 0.62
EDC3-201ENST00000315127 CAMSAP2Q08AD1 1489 aa18.91■□□□□ 0.62
EDC3-201ENST00000315127 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
EDC3-201ENST00000315127 WDR62O43379 1518 aa18.9■□□□□ 0.62
EDC3-201ENST00000315127 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
EDC3-201ENST00000315127 TMEM132EQ6IEE7 984 aa18.89■□□□□ 0.61
EDC3-201ENST00000315127 NUTM2FA1L443 756 aa18.89■□□□□ 0.61
EDC3-201ENST00000315127 POGKQ9P215 609 aa18.88■□□□□ 0.61
EDC3-201ENST00000315127 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
EDC3-201ENST00000315127 SOX12O15370 315 aa18.88■□□□□ 0.61
EDC3-201ENST00000315127 CCER2I3L3R5 266 aa18.87■□□□□ 0.61
EDC3-201ENST00000315127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.86■□□□□ 0.612e-11■□□□□ 9.6
EDC3-201ENST00000315127 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
EDC3-201ENST00000315127 B4GALNT3Q6L9W6 998 aa18.86■□□□□ 0.61
EDC3-201ENST00000315127 PANK3Q9H999 370 aa18.86■□□□□ 0.61
EDC3-201ENST00000315127 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
EDC3-201ENST00000315127 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
EDC3-201ENST00000315127 CFAP70Q5T0N1 1121 aa18.84■□□□□ 0.61
EDC3-201ENST00000315127 UGGT2Q9NYU1 1516 aa18.84■□□□□ 0.61
EDC3-201ENST00000315127 KIAA0556O60303 1618 aa18.83■□□□□ 0.61
EDC3-201ENST00000315127 ANKRD30BQ9BXX2 1392 aa18.82■□□□□ 0.6
EDC3-201ENST00000315127 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
EDC3-201ENST00000315127 CCDC136Q96JN2 1154 aa18.81■□□□□ 0.6
EDC3-201ENST00000315127 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
EDC3-201ENST00000315127 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms