RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 PTPRGP23470 1445 aa27.47■■□□□ 1.99
CD55-201ENST00000314754 CAMSAP2Q08AD1 1489 aa27.46■■□□□ 1.99
CD55-201ENST00000314754 SHROOM2Q13796 1616 aa27.45■■□□□ 1.99
CD55-201ENST00000314754 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
CD55-201ENST00000314754 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
CD55-201ENST00000314754 DENND4BO75064 1496 aaPredicted RBP27.44■■□□□ 1.98
CD55-201ENST00000314754 PLEKHD1A6NEE1 506 aa27.44■■□□□ 1.98
CD55-201ENST00000314754 PPP1R15AO75807 674 aaPredicted RBP27.43■■□□□ 1.98
CD55-201ENST00000314754 CDC42BPAQ5VT25 1732 aa27.43■■□□□ 1.98
CD55-201ENST00000314754 CENPBP07199 599 aaPredicted RBP27.43■■□□□ 1.98
CD55-201ENST00000314754 TONSLQ96HA7 1378 aa27.42■■□□□ 1.98
CD55-201ENST00000314754 ABCC10Q5T3U5 1492 aa27.38■■□□□ 1.97
CD55-201ENST00000314754 ERCC6L2Q5T890 1561 aa27.38■■□□□ 1.97
CD55-201ENST00000314754 TRIM52Q96A61 297 aa27.37■■□□□ 1.97
CD55-201ENST00000314754 CROCC2H7BZ55 1655 aa27.37■■□□□ 1.97
CD55-201ENST00000314754 SCAF1Q9H7N4 1312 aaKnown RBP27.34■■□□□ 1.97
CD55-201ENST00000314754 ADGBQ8N7X0 1667 aa27.34■■□□□ 1.97
CD55-201ENST00000314754 ZNF777Q9ULD5 760 aaPredicted RBP27.33■■□□□ 1.97
CD55-201ENST00000314754 MPHOSPH9Q99550 1183 aa27.31■■□□□ 1.96
CD55-201ENST00000314754 ADGRL2O95490 1459 aa27.31■■□□□ 1.96
CD55-201ENST00000314754 KDM5BQ9UGL1 1544 aa27.3■■□□□ 1.96
CD55-201ENST00000314754 NCOA1Q15788 1441 aa27.3■■□□□ 1.96
CD55-201ENST00000314754 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
CD55-201ENST00000314754 CLASP1Q7Z460 1538 aa27.24■■□□□ 1.95
CD55-201ENST00000314754 FOXD1Q16676 465 aa27.23■■□□□ 1.95
CD55-201ENST00000314754 SHANK2Q9UPX8 1470 aa27.23■■□□□ 1.95
CD55-201ENST00000314754 ANKRD30AQ9BXX3 1397 aa27.22■■□□□ 1.95
CD55-201ENST00000314754 ABCC2Q92887 1545 aa27.21■■□□□ 1.95
CD55-201ENST00000314754 CDC42BPBQ9Y5S2 1711 aa27.2■■□□□ 1.95
CD55-201ENST00000314754 HIRIP3Q9BW71 556 aaPredicted RBP27.19■■□□□ 1.94
CD55-201ENST00000314754 ANKRD30BQ9BXX2 1392 aa27.17■■□□□ 1.94
CD55-201ENST00000314754 PREX2Q70Z35 1606 aa27.17■■□□□ 1.94
CD55-201ENST00000314754 ARHGEF5Q12774 1597 aa27.15■■□□□ 1.94
CD55-201ENST00000314754 C9orf84Q5VXU9 1444 aa27.14■■□□□ 1.94
CD55-201ENST00000314754 SLC4A1APQ9BWU0 796 aaKnown RBP27.13■■□□□ 1.93
CD55-201ENST00000314754 TTC37Q6PGP7 1564 aa27.13■■□□□ 1.93
CD55-201ENST00000314754 PZPP20742 1482 aa27.13■■□□□ 1.93
CD55-201ENST00000314754 SAMD9LQ8IVG5 1584 aa27.13■■□□□ 1.93
CD55-201ENST00000314754 RPRD2Q5VT52 1461 aaKnown RBP27.11■■□□□ 1.93
CD55-201ENST00000314754 ANKRD50Q9ULJ7 1429 aa27.11■■□□□ 1.93
CD55-201ENST00000314754 MBD5Q9P267 1494 aa27.09■■□□□ 1.93
CD55-201ENST00000314754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.08■■□□□ 1.937e-8■■■□□ 15.9
CD55-201ENST00000314754 TSPY4P0CV99 314 aa27.08■■□□□ 1.92
CD55-201ENST00000314754 TSPY10P0CW01 314 aa27.08■■□□□ 1.92
CD55-201ENST00000314754 UHRF1BP1LA0JNW5 1464 aa27.07■■□□□ 1.92
CD55-201ENST00000314754 DDX10Q13206 875 aaKnown RBP27.06■■□□□ 1.92
CD55-201ENST00000314754 HNRNPMP52272 730 aaKnown RBP eCLIP27.06■■□□□ 1.921e-6■■■■□ 22.2
CD55-201ENST00000314754 ZCCHC11Q5TAX3 1644 aaKnown RBP27.05■■□□□ 1.92
CD55-201ENST00000314754 CCDC141Q6ZP82 1450 aa27.05■■□□□ 1.92
CD55-201ENST00000314754 RSPH4AQ5TD94 716 aa27.03■■□□□ 1.92
CD55-201ENST00000314754 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
CD55-201ENST00000314754 MYO5CQ9NQX4 1742 aa27.02■■□□□ 1.92
CD55-201ENST00000314754 TEX14Q8IWB6 1497 aa27.02■■□□□ 1.92
CD55-201ENST00000314754 KIAA1107Q9UPP5 1409 aa27.01■■□□□ 1.91
CD55-201ENST00000314754 ARHGAP5Q13017 1502 aa27■■□□□ 1.91
CD55-201ENST00000314754 KIF15Q9NS87 1388 aa26.99■■□□□ 1.91
CD55-201ENST00000314754 SYCP2Q9BX26 1530 aa26.99■■□□□ 1.91
CD55-201ENST00000314754 KDM5DQ9BY66 1539 aa26.97■■□□□ 1.91
CD55-201ENST00000314754 GTF3C3Q9Y5Q9 886 aa26.97■■□□□ 1.91
CD55-201ENST00000314754 PLEKHH2Q8IVE3 1493 aa26.95■■□□□ 1.9
CD55-201ENST00000314754 MAST1Q9Y2H9 1570 aa26.93■■□□□ 1.9
CD55-201ENST00000314754 KCNH8Q96L42 1107 aa26.93■■□□□ 1.9
CD55-201ENST00000314754 PKD2Q13563 968 aa26.93■■□□□ 1.9
CD55-201ENST00000314754 NUP155O75694 1391 aa26.92■■□□□ 1.9
CD55-201ENST00000314754 EIF4G2P78344 907 aaKnown RBP eCLIP26.88■■□□□ 1.89
CD55-201ENST00000314754 PLCH2O75038 1416 aa26.88■■□□□ 1.89
CD55-201ENST00000314754 HSPA5P11021 654 aaKnown RBP26.88■■□□□ 1.89
CD55-201ENST00000314754 NBPF8Q3BBV2 869 aa26.87■■□□□ 1.89
CD55-201ENST00000314754 ARHGEF12Q9NZN5 1544 aa26.84■■□□□ 1.89
CD55-201ENST00000314754 PLXNC1O60486 1568 aa26.84■■□□□ 1.89
CD55-201ENST00000314754 ANP32CO43423 234 aa26.8■■□□□ 1.88
CD55-201ENST00000314754 EFCAB2Q5VUJ9 269 aa26.8■■□□□ 1.88
CD55-201ENST00000314754 ARAP3Q8WWN8 1544 aa26.78■■□□□ 1.88
CD55-201ENST00000314754 FAM135AQ9P2D6 1515 aa26.78■■□□□ 1.88
CD55-201ENST00000314754 ABCC1P33527 1531 aa26.77■■□□□ 1.88
CD55-201ENST00000314754 UNC13BO14795 1591 aa26.77■■□□□ 1.88
CD55-201ENST00000314754 WASHC2AQ641Q2 1341 aa26.77■■□□□ 1.88
CD55-201ENST00000314754 CCER2I3L3R5 266 aa26.76■■□□□ 1.87
CD55-201ENST00000314754 WDR7Q9Y4E6 1490 aa26.74■■□□□ 1.87
CD55-201ENST00000314754 DUOX2Q9NRD8 1548 aa26.73■■□□□ 1.87
CD55-201ENST00000314754 SPATA31E1Q6ZUB1 1445 aa26.73■■□□□ 1.87
CD55-201ENST00000314754 ERBINQ96RT1 1412 aa26.69■■□□□ 1.86
CD55-201ENST00000314754 MYT1Q01538 1121 aa26.69■■□□□ 1.86
CD55-201ENST00000314754 UHRF1BP1Q6BDS2 1440 aa26.68■■□□□ 1.86
CD55-201ENST00000314754 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
CD55-201ENST00000314754 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
CD55-201ENST00000314754 IQGAP3Q86VI3 1631 aa26.66■■□□□ 1.86
CD55-201ENST00000314754 POLR1AO95602 1720 aaPredicted RBP26.66■■□□□ 1.86
CD55-201ENST00000314754 CCDC7Q96M83 1385 aa26.65■■□□□ 1.86
CD55-201ENST00000314754 MAGI2Q86UL8 1455 aa26.64■■□□□ 1.86
CD55-201ENST00000314754 ZNF326Q5BKZ1 582 aaKnown RBP26.64■■□□□ 1.86
CD55-201ENST00000314754 ABCA9Q8IUA7 1624 aa26.64■■□□□ 1.86
CD55-201ENST00000314754 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
CD55-201ENST00000314754 CNTLNQ9NXG0 1405 aa26.63■■□□□ 1.85
CD55-201ENST00000314754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.61■■□□□ 1.85
CD55-201ENST00000314754 RTEL1-TNFRSF6BF6WH68 1400 aa26.61■■□□□ 1.85
CD55-201ENST00000314754 RALGAPBQ86X10 1494 aa26.6■■□□□ 1.85
CD55-201ENST00000314754 CCDC144AA2RUR9 1427 aa26.58■■□□□ 1.85
CD55-201ENST00000314754 FANCAO15360 1455 aa26.57■■□□□ 1.84
CD55-201ENST00000314754 ASXL2Q76L83 1435 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms