RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 SIGLEC1Q9BZZ2 1709 aa20.21■□□□□ 0.83
TPT1-201ENST00000309246 MYO5CQ9NQX4 1742 aa20.21■□□□□ 0.83
TPT1-201ENST00000309246 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
TPT1-201ENST00000309246 LRRIQ1Q96JM4 1722 aa20.19■□□□□ 0.82
TPT1-201ENST00000309246 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
TPT1-201ENST00000309246 ZFYVE16Q7Z3T8 1539 aa20.18■□□□□ 0.82
TPT1-201ENST00000309246 YEATS2Q9ULM3 1422 aa20.17■□□□□ 0.82
TPT1-201ENST00000309246 KIF14Q15058 1648 aa20.16■□□□□ 0.82
TPT1-201ENST00000309246 PLCH2O75038 1416 aa20.15■□□□□ 0.82
TPT1-201ENST00000309246 POGZQ7Z3K3 1410 aa20.13■□□□□ 0.81
TPT1-201ENST00000309246 SCAPERQ9BY12 1400 aa20.13■□□□□ 0.81
TPT1-201ENST00000309246 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
TPT1-201ENST00000309246 MAGI2Q86UL8 1455 aa20.11■□□□□ 0.81
TPT1-201ENST00000309246 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
TPT1-201ENST00000309246 LMTK3Q96Q04 1460 aa20.09■□□□□ 0.81
TPT1-201ENST00000309246 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
TPT1-201ENST00000309246 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
TPT1-201ENST00000309246 CDC42BPBQ9Y5S2 1711 aa20.06■□□□□ 0.8
TPT1-201ENST00000309246 ARHGAP5Q13017 1502 aa20.06■□□□□ 0.8
TPT1-201ENST00000309246 CLIP1P30622 1438 aa20.05■□□□□ 0.8
TPT1-201ENST00000309246 EFCAB2Q5VUJ9 269 aa20.05■□□□□ 0.8
TPT1-201ENST00000309246 MLECQ14165 292 aa20.04■□□□□ 0.8
TPT1-201ENST00000309246 ATP10AO60312 1499 aa20.02■□□□□ 0.8
TPT1-201ENST00000309246 PREX2Q70Z35 1606 aa20.02■□□□□ 0.79
TPT1-201ENST00000309246 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.79
TPT1-201ENST00000309246 KDM5CP41229 1560 aa20.01■□□□□ 0.79
TPT1-201ENST00000309246 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
TPT1-201ENST00000309246 ARHGEF12Q9NZN5 1544 aa20■□□□□ 0.79
TPT1-201ENST00000309246 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
TPT1-201ENST00000309246 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
TPT1-201ENST00000309246 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
TPT1-201ENST00000309246 HSPA2P54652 639 aa19.97■□□□□ 0.79
TPT1-201ENST00000309246 ITSN2Q9NZM3 1697 aa19.97■□□□□ 0.79
TPT1-201ENST00000309246 DIP2CQ9Y2E4 1556 aa19.96■□□□□ 0.79
TPT1-201ENST00000309246 ABCA6Q8N139 1617 aa19.95■□□□□ 0.78
TPT1-201ENST00000309246 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
TPT1-201ENST00000309246 ABCC1P33527 1531 aa19.94■□□□□ 0.78
TPT1-201ENST00000309246 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
TPT1-201ENST00000309246 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
TPT1-201ENST00000309246 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
TPT1-201ENST00000309246 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
TPT1-201ENST00000309246 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
TPT1-201ENST00000309246 TRAPPC8Q9Y2L5 1435 aa19.9■□□□□ 0.78
TPT1-201ENST00000309246 KIDINS220Q9ULH0 1771 aa19.88■□□□□ 0.77
TPT1-201ENST00000309246 MLH3Q9UHC1 1453 aa19.88■□□□□ 0.77
TPT1-201ENST00000309246 CEBPAP49715 358 aaPredicted RBP19.87■□□□□ 0.77
TPT1-201ENST00000309246 C3P01024 1663 aa19.85■□□□□ 0.77
TPT1-201ENST00000309246 SAMD9LQ8IVG5 1584 aa19.85■□□□□ 0.77
TPT1-201ENST00000309246 SETD1BQ9UPS6 1966 aaKnown RBP19.83■□□□□ 0.77
TPT1-201ENST00000309246 AGLP35573 1532 aa19.82■□□□□ 0.76
TPT1-201ENST00000309246 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
TPT1-201ENST00000309246 STRCQ7RTU9 1775 aa19.8■□□□□ 0.76
TPT1-201ENST00000309246 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
TPT1-201ENST00000309246 GPATCH8Q9UKJ3 1502 aaKnown RBP19.79■□□□□ 0.76
TPT1-201ENST00000309246 UHRF1BP1Q6BDS2 1440 aa19.77■□□□□ 0.76
TPT1-201ENST00000309246 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
TPT1-201ENST00000309246 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
TPT1-201ENST00000309246 ATP7AQ04656 1500 aa19.73■□□□□ 0.75
TPT1-201ENST00000309246 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
TPT1-201ENST00000309246 MROH2AA6NES4 1674 aa19.72■□□□□ 0.75
TPT1-201ENST00000309246 HNRNPMP52272 730 aaKnown RBP eCLIP19.72■□□□□ 0.75
TPT1-201ENST00000309246 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
TPT1-201ENST00000309246 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
TPT1-201ENST00000309246 CERKQ8TCT0 537 aa19.71■□□□□ 0.75
TPT1-201ENST00000309246 SPAG9O60271 1321 aaKnown RBP19.71■□□□□ 0.75
TPT1-201ENST00000309246 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
TPT1-201ENST00000309246 CNTLNQ9NXG0 1405 aa19.7■□□□□ 0.74
TPT1-201ENST00000309246 PLEKHH2Q8IVE3 1493 aa19.7■□□□□ 0.74
TPT1-201ENST00000309246 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
TPT1-201ENST00000309246 CLTCQ00610 1675 aaKnown RBP19.68■□□□□ 0.74
TPT1-201ENST00000309246 KIAA1107Q9UPP5 1409 aa19.68■□□□□ 0.74
TPT1-201ENST00000309246 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
TPT1-201ENST00000309246 PLXNC1O60486 1568 aa19.68■□□□□ 0.74
TPT1-201ENST00000309246 ADGBQ8N7X0 1667 aa19.66■□□□□ 0.74
TPT1-201ENST00000309246 A2MP01023 1474 aa19.65■□□□□ 0.74
TPT1-201ENST00000309246 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
TPT1-201ENST00000309246 CEP162Q5TB80 1403 aa19.64■□□□□ 0.73
TPT1-201ENST00000309246 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
TPT1-201ENST00000309246 PTPRTO14522 1441 aa19.6■□□□□ 0.73
TPT1-201ENST00000309246 NPATQ14207 1427 aa19.6■□□□□ 0.73
TPT1-201ENST00000309246 ZMYM3Q14202 1370 aa19.6■□□□□ 0.73
TPT1-201ENST00000309246 MYO3AQ8NEV4 1616 aa19.59■□□□□ 0.73
TPT1-201ENST00000309246 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
TPT1-201ENST00000309246 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
TPT1-201ENST00000309246 CAMSAP1Q5T5Y3 1602 aa19.58■□□□□ 0.73
TPT1-201ENST00000309246 MBD5Q9P267 1494 aa19.58■□□□□ 0.72
TPT1-201ENST00000309246 GGT6Q6P531 493 aa19.56■□□□□ 0.72
TPT1-201ENST00000309246 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
TPT1-201ENST00000309246 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
TPT1-201ENST00000309246 CEP170BQ9Y4F5 1589 aaPredicted RBP19.53■□□□□ 0.72
TPT1-201ENST00000309246 PTPRKQ15262 1439 aa19.53■□□□□ 0.72
TPT1-201ENST00000309246 CAMSAP2Q08AD1 1489 aa19.53■□□□□ 0.72
TPT1-201ENST00000309246 RTEL1-TNFRSF6BF6WH68 1400 aa19.52■□□□□ 0.72
TPT1-201ENST00000309246 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
TPT1-201ENST00000309246 NCKAP5LQ9HCH0 1330 aa19.48■□□□□ 0.71
TPT1-201ENST00000309246 DHX29Q7Z478 1369 aaKnown RBP19.47■□□□□ 0.71
TPT1-201ENST00000309246 PLA2R1Q13018 1463 aa19.47■□□□□ 0.71
TPT1-201ENST00000309246 ARHGEF5Q12774 1597 aa19.45■□□□□ 0.7
TPT1-201ENST00000309246 KDM5DQ9BY66 1539 aa19.44■□□□□ 0.7
TPT1-201ENST00000309246 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms